RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 STAB1Q9NY15 2570 aa12.08□□□□□ -0.48
CCM2-214ENST00000481194 C1orf64Q8NEQ6 169 aa12.07□□□□□ -0.48
CCM2-214ENST00000481194 SMR3BP02814 79 aaPredicted RBP12.07□□□□□ -0.48
CCM2-214ENST00000481194 MAP1AP78559 2803 aaPredicted RBP12.07□□□□□ -0.48
CCM2-214ENST00000481194 H3BPC8 53 aa12.07□□□□□ -0.48
CCM2-214ENST00000481194 CD164Q04900 197 aa12.05□□□□□ -0.48
CCM2-214ENST00000481194 FAM229BQ4G0N7 80 aa12.04□□□□□ -0.48
CCM2-214ENST00000481194 RETNLBQ9BQ08 111 aa12.04□□□□□ -0.48
CCM2-214ENST00000481194 Q8NDZ9 215 aa12.03□□□□□ -0.48
CCM2-214ENST00000481194 J3QL48 77 aa11.99□□□□□ -0.49
CCM2-214ENST00000481194 SPINK1P00995 79 aa11.99□□□□□ -0.49
CCM2-214ENST00000481194 PMAIP1Q13794 54 aa11.99□□□□□ -0.49
CCM2-214ENST00000481194 A0A1W2PNM2 257 aa11.97□□□□□ -0.49
CCM2-214ENST00000481194 PSPHP1O15172 72 aa11.97□□□□□ -0.49
CCM2-214ENST00000481194 PRR15Q8IV56 129 aa11.97□□□□□ -0.49
CCM2-214ENST00000481194 K7EQZ3 153 aa11.96□□□□□ -0.5
CCM2-214ENST00000481194 SPRR1BP22528 89 aa11.95□□□□□ -0.5
CCM2-214ENST00000481194 ZZEF1O43149 2961 aa11.95□□□□□ -0.5
CCM2-214ENST00000481194 MRPL34Q9BQ48 92 aaKnown RBP11.95□□□□□ -0.5
CCM2-214ENST00000481194 A0A1B0GVX0 72 aa11.95□□□□□ -0.5
CCM2-214ENST00000481194 ANAPC11Q9NYG5 84 aa11.94□□□□□ -0.5
CCM2-214ENST00000481194 Q6ZRN7 208 aaPredicted RBP11.92□□□□□ -0.5
CCM2-214ENST00000481194 C8orf17Q9NRJ1 99 aa11.92□□□□□ -0.5
CCM2-214ENST00000481194 TRAV22A0A0B4J277 110 aa11.91□□□□□ -0.5
CCM2-214ENST00000481194 IGKV2D-30A0A075B6S6 120 aa11.91□□□□□ -0.5
CCM2-214ENST00000481194 IGKV2-30P06310 120 aa11.91□□□□□ -0.5
CCM2-214ENST00000481194 Q96NJ1 140 aa11.9□□□□□ -0.5
CCM2-214ENST00000481194 RPS28P62857 69 aaKnown RBP11.89□□□□□ -0.51
CCM2-214ENST00000481194 ACYP2P14621 99 aa11.89□□□□□ -0.51
CCM2-214ENST00000481194 NOTCH1P46531 2555 aa11.89□□□□□ -0.51
CCM2-214ENST00000481194 IGLV8-61A0A075B6I0 122 aa11.87□□□□□ -0.51
CCM2-214ENST00000481194 KRTAP10-2P60368 255 aa11.87□□□□□ -0.51
CCM2-214ENST00000481194 KRTAP10-1P60331 282 aa11.86□□□□□ -0.51
CCM2-214ENST00000481194 C7orf65Q6ZTY9 151 aa11.86□□□□□ -0.51
CCM2-214ENST00000481194 LOC101927531A0A1B0GV80 90 aa11.86□□□□□ -0.51
CCM2-214ENST00000481194 DMDP11532 3685 aa11.84□□□□□ -0.51
CCM2-214ENST00000481194 A0A0G2JQZ4 141 aa11.84□□□□□ -0.51
CCM2-214ENST00000481194 FBN2P35556 2912 aa11.83□□□□□ -0.52
CCM2-214ENST00000481194 ATP11AUNQ6ZP68 121 aa11.83□□□□□ -0.52
CCM2-214ENST00000481194 MUC3AQ02505 3323 aa11.81□□□□□ -0.52
CCM2-214ENST00000481194 A0A1B0GU69 56 aa11.8□□□□□ -0.52
CCM2-214ENST00000481194 ZANQ9Y493 2812 aa11.8□□□□□ -0.52
CCM2-214ENST00000481194 DSCR10P59022 87 aa11.79□□□□□ -0.52
CCM2-214ENST00000481194 PDZD2O15018 2839 aa11.79□□□□□ -0.52
CCM2-214ENST00000481194 CELSR2Q9HCU4 2923 aa11.78□□□□□ -0.52
CCM2-214ENST00000481194 KRTAP4-16G5E9R7 235 aaPredicted RBP11.78□□□□□ -0.52
CCM2-214ENST00000481194 PRO0628Q9UI54 55 aa11.77□□□□□ -0.53
CCM2-214ENST00000481194 TACC2O95359 2948 aa11.76□□□□□ -0.53
CCM2-214ENST00000481194 LINC00483Q53H64 154 aa11.76□□□□□ -0.53
CCM2-214ENST00000481194 PRR26Q8N8Z3 221 aa11.73□□□□□ -0.53
CCM2-214ENST00000481194 TENM4Q6N022 2769 aa11.72□□□□□ -0.53
CCM2-214ENST00000481194 WDFY3Q8IZQ1 3526 aa11.72□□□□□ -0.53
CCM2-214ENST00000481194 DCHS1Q96JQ0 3298 aa11.71□□□□□ -0.53
CCM2-214ENST00000481194 PANO1I0J062 215 aa11.69□□□□□ -0.54
CCM2-214ENST00000481194 NBEAL2Q6ZNJ1 2754 aa11.68□□□□□ -0.54
CCM2-214ENST00000481194 Q5VSD8 79 aa11.65□□□□□ -0.54
CCM2-214ENST00000481194 CRYBG3Q68DQ2 2970 aa11.62□□□□□ -0.55
CCM2-214ENST00000481194 NIPBLQ6KC79 2804 aaeCLIP11.62□□□□□ -0.55
CCM2-214ENST00000481194 C9orf92A6NGG3 77 aa11.62□□□□□ -0.55
CCM2-214ENST00000481194 C4orf26Q17RF5 130 aa11.61□□□□□ -0.55
CCM2-214ENST00000481194 DCHS2Q6V1P9 2916 aa11.59□□□□□ -0.55
CCM2-214ENST00000481194 KLKP1Q107X0 134 aa11.59□□□□□ -0.55
CCM2-214ENST00000481194 ASH1LQ9NR48 2969 aaKnown RBP11.57□□□□□ -0.56
CCM2-214ENST00000481194 CFAP47Q6ZTR5 3102 aa11.55□□□□□ -0.56
CCM2-214ENST00000481194 RELNP78509 3460 aa11.55□□□□□ -0.56
CCM2-214ENST00000481194 LAMA5O15230 3695 aa11.55□□□□□ -0.56
CCM2-214ENST00000481194 KRTAP7-1Q8IUC3 87 aa11.55□□□□□ -0.56
CCM2-214ENST00000481194 LINC00472Q9H8W2 130 aa11.53□□□□□ -0.56
CCM2-214ENST00000481194 IGLV7-46A0A075B6I9 117 aa11.52□□□□□ -0.57
CCM2-214ENST00000481194 COA5Q86WW8 74 aa11.52□□□□□ -0.57
CCM2-214ENST00000481194 CYP4F30PQ9H0H9 118 aa11.51□□□□□ -0.57
CCM2-214ENST00000481194 ZFHX4Q86UP3 3567 aa11.5□□□□□ -0.57
CCM2-214ENST00000481194 MMP24-AS1A0A0U1RRL7 71 aa11.46□□□□□ -0.58
CCM2-214ENST00000481194 KRTAP13-1Q8IUC0 172 aa11.46□□□□□ -0.58
CCM2-214ENST00000481194 OCR1Q9BZK8 76 aa11.46□□□□□ -0.58
CCM2-214ENST00000481194 ANK3Q12955 4377 aaKnown RBP11.45□□□□□ -0.58
CCM2-214ENST00000481194 NBEAL1Q6ZS30 2694 aa11.45□□□□□ -0.58
CCM2-214ENST00000481194 MXRA5Q9NR99 2828 aa11.45□□□□□ -0.58
CCM2-214ENST00000481194 BSNQ9UPA5 3926 aa11.44□□□□□ -0.58
CCM2-214ENST00000481194 KRTAP11-1Q8IUC1 163 aa11.44□□□□□ -0.58
CCM2-214ENST00000481194 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
CCM2-214ENST00000481194 RPS29P62273 56 aaKnown RBP11.41□□□□□ -0.58
CCM2-214ENST00000481194 OTOGQ6ZRI0 2925 aa11.41□□□□□ -0.58
CCM2-214ENST00000481194 ASPMQ8IZT6 3477 aa11.4□□□□□ -0.59
CCM2-214ENST00000481194 UQCR11O14957 56 aa11.39□□□□□ -0.59
CCM2-214ENST00000481194 A8MUN3 132 aa11.38□□□□□ -0.59
CCM2-214ENST00000481194 FP248Q71RG6 208 aaPredicted RBP11.38□□□□□ -0.59
CCM2-214ENST00000481194 H7BZZ5 65 aa11.38□□□□□ -0.59
CCM2-214ENST00000481194 RBM12B-AS1Q9P1G2 102 aa11.37□□□□□ -0.59
CCM2-214ENST00000481194 Q6ZSA8 131 aa11.36□□□□□ -0.59
CCM2-214ENST00000481194 ASB16-AS1Q495Z4 193 aa11.36□□□□□ -0.59
CCM2-214ENST00000481194 A0A087X002 238 aa11.31□□□□□ -0.6
CCM2-214ENST00000481194 ZCCHC13Q8WW36 166 aaKnown RBP11.31□□□□□ -0.6
CCM2-214ENST00000481194 NF1P21359 2839 aa11.31□□□□□ -0.6
CCM2-214ENST00000481194 COX6B2Q6YFQ2 88 aa11.3□□□□□ -0.6
CCM2-214ENST00000481194 Q5XG85 94 aa11.27□□□□□ -0.61
CCM2-214ENST00000481194 OXTP01178 125 aa11.26□□□□□ -0.61
CCM2-214ENST00000481194 MIR22HGQ0VDD5 57 aa11.24□□□□□ -0.61
CCM2-214ENST00000481194 STAB2Q8WWQ8 2551 aa11.19□□□□□ -0.62
CCM2-214ENST00000481194 Q8N1X5 172 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 129 ms