RNA–Protein interactions for RNA: ENST00000480327.1

VCP-206, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 884 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-206ENST00000480327 TYMSOSQ8TAI1 123 aa5.33□□□□□ -1.56
VCP-206ENST00000480327 C9orf118A6NHY6 69 aa5.32□□□□□ -1.56
VCP-206ENST00000480327 TRIAP1O43715 76 aa5.32□□□□□ -1.56
VCP-206ENST00000480327 SLC25A20O43772 301 aa5.32□□□□□ -1.56
VCP-206ENST00000480327 TSPAN13O95857 204 aa5.32□□□□□ -1.56
VCP-206ENST00000480327 IGLV9-49A0A0B4J1Y8 123 aa5.31□□□□□ -1.56
VCP-206ENST00000480327 hADV29S1A0JD25 119 aa5.31□□□□□ -1.56
VCP-206ENST00000480327 LINC00483Q53H64 154 aa5.31□□□□□ -1.56
VCP-206ENST00000480327 FAM218AQ96MZ4 157 aa5.3□□□□□ -1.56
VCP-206ENST00000480327 H0YGX0 51 aa5.29□□□□□ -1.56
VCP-206ENST00000480327 MOBPQ13875 183 aa5.29□□□□□ -1.56
VCP-206ENST00000480327 Q6ZQY7 126 aa5.29□□□□□ -1.56
VCP-206ENST00000480327 CLEC2BQ92478 149 aa5.29□□□□□ -1.56
VCP-206ENST00000480327 NAA38Q9BRA0 125 aaKnown RBP5.29□□□□□ -1.56
VCP-206ENST00000480327 TEX49A0A1B0GTD5 131 aa5.28□□□□□ -1.56
VCP-206ENST00000480327 SPRR1BP22528 89 aa5.28□□□□□ -1.56
VCP-206ENST00000480327 LINC01547P58512 204 aaPredicted RBP5.28□□□□□ -1.56
VCP-206ENST00000480327 C9orf153Q5TBE3 101 aa5.28□□□□□ -1.56
VCP-206ENST00000480327 MUC17Q685J3 4493 aa5.28□□□□□ -1.56
VCP-206ENST00000480327 SCGB1C2P0DMR2 95 aa5.27□□□□□ -1.57
VCP-206ENST00000480327 Q8N377 158 aa5.27□□□□□ -1.57
VCP-206ENST00000480327 Q8NBF4 154 aa5.27□□□□□ -1.57
VCP-206ENST00000480327 KRTAP9-2Q9BYQ4 174 aa5.27□□□□□ -1.57
VCP-206ENST00000480327 LAMTOR3Q9UHA4 124 aa5.27□□□□□ -1.57
VCP-206ENST00000480327 SPCS1Q9Y6A9 102 aa5.27□□□□□ -1.57
VCP-206ENST00000480327 IGLV5-48A0A075B6I7 105 aa5.26□□□□□ -1.57
VCP-206ENST00000480327 A0A1W2PPM0 123 aa5.26□□□□□ -1.57
VCP-206ENST00000480327 F8W1H4 67 aa5.26□□□□□ -1.57
VCP-206ENST00000480327 SNCGO76070 127 aa5.26□□□□□ -1.57
VCP-206ENST00000480327 COX6CP09669 75 aa5.26□□□□□ -1.57
VCP-206ENST00000480327 FABP2P12104 132 aa5.26□□□□□ -1.57
VCP-206ENST00000480327 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.26□□□□□ -1.57
VCP-206ENST00000480327 SMIM29Q86T20 159 aa5.26□□□□□ -1.57
VCP-206ENST00000480327 LINC00304Q8N9R0 145 aa5.26□□□□□ -1.57
VCP-206ENST00000480327 LCE2AQ5TA79 106 aaPredicted RBP5.24□□□□□ -1.57
VCP-206ENST00000480327 A0A0G2JQZ4 141 aa5.23□□□□□ -1.57
VCP-206ENST00000480327 A0A1B0GX51 115 aa5.23□□□□□ -1.57
VCP-206ENST00000480327 H3BUT2 72 aa5.23□□□□□ -1.57
VCP-206ENST00000480327 C4orf48Q5BLP8 95 aa5.23□□□□□ -1.57
VCP-206ENST00000480327 SSBP3-AS1Q7Z2R9 100 aa5.23□□□□□ -1.57
VCP-206ENST00000480327 F8WEM9 126 aa5.22□□□□□ -1.57
VCP-206ENST00000480327 DNAL4O96015 105 aa5.22□□□□□ -1.57
VCP-206ENST00000480327 PRR4Q16378 134 aa5.22□□□□□ -1.57
VCP-206ENST00000480327 HRCT1Q6UXD1 115 aa5.22□□□□□ -1.57
VCP-206ENST00000480327 LST1O00453 97 aa5.21□□□□□ -1.58
VCP-206ENST00000480327 TCL1BO95988 128 aa5.2□□□□□ -1.58
VCP-206ENST00000480327 TRACP01848 142 aa5.19□□□□□ -1.58
VCP-206ENST00000480327 NDUFV3P56181 108 aaKnown RBP5.19□□□□□ -1.58
VCP-206ENST00000480327 SPAG11AQ6PDA7 123 aa5.19□□□□□ -1.58
VCP-206ENST00000480327 PPDPFLQ8WWR9 84 aa5.19□□□□□ -1.58
VCP-206ENST00000480327 RETNLBQ9BQ08 111 aa5.19□□□□□ -1.58
VCP-206ENST00000480327 ORMDL1Q9P0S3 153 aa5.19□□□□□ -1.58
VCP-206ENST00000480327 ATXN8Q156A1 80 aa5.18□□□□□ -1.58
VCP-206ENST00000480327 SPINK1P00995 79 aa5.17□□□□□ -1.58
VCP-206ENST00000480327 GHRHP01286 108 aa5.17□□□□□ -1.58
VCP-206ENST00000480327 LYRM7Q5U5X0 104 aa5.16□□□□□ -1.58
VCP-206ENST00000480327 IGFL1Q6UW32 110 aa5.16□□□□□ -1.58
VCP-206ENST00000480327 ANAPC13Q9BS18 74 aa5.16□□□□□ -1.58
VCP-206ENST00000480327 IGLV8-61A0A075B6I0 122 aa5.15□□□□□ -1.59
VCP-206ENST00000480327 H3BMG7 143 aa5.15□□□□□ -1.59
VCP-206ENST00000480327 TMEM256-PLSCR3K7ERE1 68 aa5.15□□□□□ -1.59
VCP-206ENST00000480327 BAALC-AS2P0C853 105 aa5.15□□□□□ -1.59
VCP-206ENST00000480327 SS18L2Q9UHA2 77 aa5.15□□□□□ -1.59
VCP-206ENST00000480327 TRBV20-1A0A075B6N2 111 aa5.14□□□□□ -1.59
VCP-206ENST00000480327 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
VCP-206ENST00000480327 H3BQ85 93 aa5.14□□□□□ -1.59
VCP-206ENST00000480327 Q6JHZ5 121 aa5.14□□□□□ -1.59
VCP-206ENST00000480327 Q6Q795 121 aa5.14□□□□□ -1.59
VCP-206ENST00000480327 A0A0U1RQV1 116 aa5.13□□□□□ -1.59
VCP-206ENST00000480327 C9JAW5 83 aa5.13□□□□□ -1.59
VCP-206ENST00000480327 CD164Q04900 197 aa5.13□□□□□ -1.59
VCP-206ENST00000480327 CDIP1Q9H305 208 aa5.13□□□□□ -1.59
VCP-206ENST00000480327 PRO0461Q9UI25 63 aa5.13□□□□□ -1.59
VCP-206ENST00000480327 RPS29P62273 56 aaKnown RBP5.12□□□□□ -1.59
VCP-206ENST00000480327 ETDBQ3ZM63 59 aa5.12□□□□□ -1.59
VCP-206ENST00000480327 ANKRD29Q8N6D5 301 aa5.12□□□□□ -1.59
VCP-206ENST00000480327 C5orf47Q569G3 176 aa5.11□□□□□ -1.59
VCP-206ENST00000480327 LIMD2Q9BT23 127 aa5.11□□□□□ -1.59
VCP-206ENST00000480327 IGLV7-46A0A075B6I9 117 aa5.09□□□□□ -1.59
VCP-206ENST00000480327 TRBV7-7A0A0K0K1E9 115 aa5.09□□□□□ -1.59
VCP-206ENST00000480327 MT-ATP8P03928 68 aa5.09□□□□□ -1.59
VCP-206ENST00000480327 TEN1Q86WV5 123 aa5.09□□□□□ -1.59
VCP-206ENST00000480327 SMIM20Q8N5G0 67 aa5.09□□□□□ -1.59
VCP-206ENST00000480327 RBM3P98179 157 aaKnown RBP5.08□□□□□ -1.6
VCP-206ENST00000480327 A0A1W2PNM2 257 aa5.07□□□□□ -1.6
VCP-206ENST00000480327 DSCR8Q96T75 97 aa5.07□□□□□ -1.6
VCP-206ENST00000480327 A0A087WSZ3 146 aa5.06□□□□□ -1.6
VCP-206ENST00000480327 CCKP06307 115 aa5.06□□□□□ -1.6
VCP-206ENST00000480327 TPRXLQ17RH7 258 aa5.06□□□□□ -1.6
VCP-206ENST00000480327 Q5XG85 94 aa5.06□□□□□ -1.6
VCP-206ENST00000480327 FP248Q71RG6 208 aaPredicted RBP5.06□□□□□ -1.6
VCP-206ENST00000480327 TRBV7-4A0A0J9YYF1 115 aa5.05□□□□□ -1.6
VCP-206ENST00000480327 H3BT86 120 aa5.05□□□□□ -1.6
VCP-206ENST00000480327 C1orf195Q5TG92 126 aa5.05□□□□□ -1.6
VCP-206ENST00000480327 C14orf132Q9NPU4 83 aa5.05□□□□□ -1.6
VCP-206ENST00000480327 JMJD7-PLA2G4BH0Y9G9 81 aa5.04□□□□□ -1.6
VCP-206ENST00000480327 SMCPP49901 116 aaPredicted RBP5.03□□□□□ -1.6
VCP-206ENST00000480327 KRTAP4-1Q9BYQ7 146 aa5.03□□□□□ -1.6
VCP-206ENST00000480327 FSIP2Q5CZC0 6907 aa5.03□□□□□ -1.6
VCP-206ENST00000480327 CCDC179H3BU77 68 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms