RNA–Protein interactions for RNA: ENST00000479197.1

RFK-204, Transcript of riboflavin kinase, human

TSL 1 (best)

Gene RFK, Length 1,501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFK-204	ENST00000479197	FAM218A	Q96MZ4	157 aa		10.43	□□□□□ -0.74
RFK-204	ENST00000479197	SPAG11A	Q6PDA7	123 aa		10.43	□□□□□ -0.74
RFK-204	ENST00000479197	C4orf48	Q5BLP8	95 aa		10.42	□□□□□ -0.74
RFK-204	ENST00000479197	SMIM29	Q86T20	159 aa		10.42	□□□□□ -0.74
RFK-204	ENST00000479197	COX6C	P09669	75 aa		10.4	□□□□□ -0.74
RFK-204	ENST00000479197		A0A1B0GX51	115 aa		10.39	□□□□□ -0.75
RFK-204	ENST00000479197	CLEC2B	Q92478	149 aa		10.38	□□□□□ -0.75
RFK-204	ENST00000479197	SMCP	P49901	116 aa	Predicted RBP	10.37	□□□□□ -0.75
RFK-204	ENST00000479197	PPDPFL	Q8WWR9	84 aa		10.37	□□□□□ -0.75
RFK-204	ENST00000479197	SPINK1	P00995	79 aa		10.36	□□□□□ -0.75
RFK-204	ENST00000479197	OCIAD2	Q56VL3	154 aa		10.36	□□□□□ -0.75
RFK-204	ENST00000479197		F8WEM9	126 aa		10.34	□□□□□ -0.75
RFK-204	ENST00000479197	BATF	Q16520	125 aa		10.34	□□□□□ -0.75
RFK-204	ENST00000479197	SCGB1C2	P0DMR2	95 aa		10.33	□□□□□ -0.76
RFK-204	ENST00000479197	DNAL4	O96015	105 aa		10.32	□□□□□ -0.76
RFK-204	ENST00000479197	GHRH	P01286	108 aa		10.31	□□□□□ -0.76
RFK-204	ENST00000479197	RPS29	P62273	56 aa	Known RBP	10.31	□□□□□ -0.76
RFK-204	ENST00000479197	SNHG12	Q9BXW3	62 aa		10.31	□□□□□ -0.76
RFK-204	ENST00000479197	PRR4	Q16378	134 aa		10.29	□□□□□ -0.76
RFK-204	ENST00000479197	RETNLB	Q9BQ08	111 aa		10.29	□□□□□ -0.76
RFK-204	ENST00000479197	HRCT1	Q6UXD1	115 aa		10.28	□□□□□ -0.76
RFK-204	ENST00000479197	NAA38	Q9BRA0	125 aa	Known RBP	10.28	□□□□□ -0.76
RFK-204	ENST00000479197	IGLV8-61	A0A075B6I0	122 aa		10.27	□□□□□ -0.77
RFK-204	ENST00000479197	LST1	O00453	97 aa		10.27	□□□□□ -0.77
RFK-204	ENST00000479197	CD164	Q04900	197 aa		10.27	□□□□□ -0.77
RFK-204	ENST00000479197	ORMDL1	Q9P0S3	153 aa		10.27	□□□□□ -0.77
RFK-204	ENST00000479197	TRAC	P01848	142 aa		10.26	□□□□□ -0.77
RFK-204	ENST00000479197		A0A0G2JQZ4	141 aa		10.25	□□□□□ -0.77
RFK-204	ENST00000479197	FABP2	P12104	132 aa		10.25	□□□□□ -0.77
RFK-204	ENST00000479197		Q6JHZ5	121 aa		10.25	□□□□□ -0.77
RFK-204	ENST00000479197	LRP2	P98164	4655 aa		10.24	□□□□□ -0.77
RFK-204	ENST00000479197		H3BQ85	93 aa		10.24	□□□□□ -0.77
RFK-204	ENST00000479197	NDUFV3	P56181	108 aa	Known RBP	10.23	□□□□□ -0.77
RFK-204	ENST00000479197	LIMD2	Q9BT23	127 aa		10.23	□□□□□ -0.77
RFK-204	ENST00000479197	LPA	P08519	4548 aa		10.22	□□□□□ -0.77
RFK-204	ENST00000479197		H3BUT2	72 aa		10.22	□□□□□ -0.77
RFK-204	ENST00000479197	IGFL1	Q6UW32	110 aa		10.22	□□□□□ -0.77
RFK-204	ENST00000479197	TMEM256-PLSCR3	K7ERE1	68 aa		10.21	□□□□□ -0.78
RFK-204	ENST00000479197	LYRM7	Q5U5X0	104 aa		10.21	□□□□□ -0.78
RFK-204	ENST00000479197	ATXN8	Q156A1	80 aa		10.2	□□□□□ -0.78
RFK-204	ENST00000479197	TCL1B	O95988	128 aa		10.19	□□□□□ -0.78
RFK-204	ENST00000479197	C9orf118	A6NHY6	69 aa		10.18	□□□□□ -0.78
RFK-204	ENST00000479197		H3BMG7	143 aa		10.18	□□□□□ -0.78
RFK-204	ENST00000479197	TAX1BP3	O14907	124 aa		10.18	□□□□□ -0.78
RFK-204	ENST00000479197	FP248	Q71RG6	208 aa	Predicted RBP	10.18	□□□□□ -0.78
RFK-204	ENST00000479197	IGLV7-46	A0A075B6I9	117 aa		10.17	□□□□□ -0.78
RFK-204	ENST00000479197		Q5XG85	94 aa		10.16	□□□□□ -0.78
RFK-204	ENST00000479197	UBE2V1	Q13404	147 aa		10.15	□□□□□ -0.78
RFK-204	ENST00000479197	TRBV20-1	A0A075B6N2	111 aa		10.14	□□□□□ -0.79
RFK-204	ENST00000479197	PCP4L1	A6NKN8	68 aa		10.14	□□□□□ -0.79
RFK-204	ENST00000479197	TRBV7-7	A0A0K0K1E9	115 aa		10.12	□□□□□ -0.79
RFK-204	ENST00000479197	LCE2A	Q5TA79	106 aa	Predicted RBP	10.12	□□□□□ -0.79
RFK-204	ENST00000479197		A0A1W2PPM0	123 aa		10.12	□□□□□ -0.79
RFK-204	ENST00000479197	BAALC-AS2	P0C853	105 aa		10.12	□□□□□ -0.79
RFK-204	ENST00000479197	COL5A1-AS1	Q5SY13	56 aa		10.12	□□□□□ -0.79
RFK-204	ENST00000479197		A0A1B0GV72	72 aa		10.11	□□□□□ -0.79
RFK-204	ENST00000479197	UBR4	Q5T4S7	5183 aa		10.11	□□□□□ -0.79
RFK-204	ENST00000479197	TPRXL	Q17RH7	258 aa		10.1	□□□□□ -0.79
RFK-204	ENST00000479197		Q6Q795	121 aa		10.1	□□□□□ -0.79
RFK-204	ENST00000479197	ANKRD29	Q8N6D5	301 aa		10.1	□□□□□ -0.79
RFK-204	ENST00000479197	TEN1	Q86WV5	123 aa		10.08	□□□□□ -0.8
RFK-204	ENST00000479197		C9JAW5	83 aa		10.05	□□□□□ -0.8
RFK-204	ENST00000479197	C1orf195	Q5TG92	126 aa		10.05	□□□□□ -0.8
RFK-204	ENST00000479197	RBM3	P98179	157 aa	Known RBP	10.04	□□□□□ -0.8
RFK-204	ENST00000479197	ASB16-AS1	Q495Z4	193 aa		10.04	□□□□□ -0.8
RFK-204	ENST00000479197		A0A1W2PNM2	257 aa		10.03	□□□□□ -0.8
RFK-204	ENST00000479197	KRTAP13-3	Q3SY46	172 aa		10.03	□□□□□ -0.8
RFK-204	ENST00000479197	CDIP1	Q9H305	208 aa		10.03	□□□□□ -0.8
RFK-204	ENST00000479197	TRBV7-4	A0A0J9YYF1	115 aa		10.02	□□□□□ -0.81
RFK-204	ENST00000479197	DSCR8	Q96T75	97 aa		10.02	□□□□□ -0.81
RFK-204	ENST00000479197	SS18L2	Q9UHA2	77 aa		10.02	□□□□□ -0.81
RFK-204	ENST00000479197	SPCS1	Q9Y6A9	102 aa		10.02	□□□□□ -0.81
RFK-204	ENST00000479197		A0A087WSZ3	146 aa		10.01	□□□□□ -0.81
RFK-204	ENST00000479197	CCK	P06307	115 aa		10	□□□□□ -0.81
RFK-204	ENST00000479197	JMJD7-PLA2G4B	H0Y9G9	81 aa		9.99	□□□□□ -0.81
RFK-204	ENST00000479197		H3BT86	120 aa		9.97	□□□□□ -0.81
RFK-204	ENST00000479197	MTURN	Q8N3F0	131 aa		9.97	□□□□□ -0.81
RFK-204	ENST00000479197	VPS25	Q9BRG1	176 aa		9.95	□□□□□ -0.82
RFK-204	ENST00000479197	LCE2C	Q5TA81	110 aa		9.93	□□□□□ -0.82
RFK-204	ENST00000479197	OBSCN-AS1	Q96MR7	158 aa		9.92	□□□□□ -0.82
RFK-204	ENST00000479197		K7EP34	96 aa		9.92	□□□□□ -0.82
RFK-204	ENST00000479197	LOC110117498	A0A087WWA1	95 aa		9.91	□□□□□ -0.82
RFK-204	ENST00000479197	C9orf92	A6NGG3	77 aa		9.9	□□□□□ -0.82
RFK-204	ENST00000479197		Q6ZQT0	140 aa		9.9	□□□□□ -0.82
RFK-204	ENST00000479197	C14orf132	Q9NPU4	83 aa		9.9	□□□□□ -0.82
RFK-204	ENST00000479197	PDE6G	P18545	87 aa		9.89	□□□□□ -0.83
RFK-204	ENST00000479197		Q96NJ1	140 aa		9.88	□□□□□ -0.83
RFK-204	ENST00000479197	XP32	Q5T750	250 aa		9.87	□□□□□ -0.83
RFK-204	ENST00000479197	MUC17	Q685J3	4493 aa		9.86	□□□□□ -0.83
RFK-204	ENST00000479197	RNF213	Q63HN8	5207 aa		9.86	□□□□□ -0.83
RFK-204	ENST00000479197	C21orf62-AS1	Q17RA5	79 aa		9.86	□□□□□ -0.83
RFK-204	ENST00000479197	GTF2H5	Q6ZYL4	71 aa		9.86	□□□□□ -0.83
RFK-204	ENST00000479197	PRO0461	Q9UI25	63 aa		9.83	□□□□□ -0.84
RFK-204	ENST00000479197		A0A1B0GW54	56 aa		9.82	□□□□□ -0.84
RFK-204	ENST00000479197	LINC00472	Q9H8W2	130 aa		9.82	□□□□□ -0.84
RFK-204	ENST00000479197	SIGMAR1	Q99720	223 aa		9.81	□□□□□ -0.84
RFK-204	ENST00000479197	IGKV4-1	P06312	121 aa		9.8	□□□□□ -0.84
RFK-204	ENST00000479197	DEFB116	Q30KQ4	102 aa		9.78	□□□□□ -0.84
RFK-204	ENST00000479197	SEC61B	P60468	96 aa	Known RBP	9.77	□□□□□ -0.84
RFK-204	ENST00000479197	MUC2	Q02817	5179 aa		9.75	□□□□□ -0.85

Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms