RNA–Protein interactions for RNA: ENST00000479099.2

RC3H1-204, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-204ENST00000479099 KRTAP21-2Q3LI59 83 aa1.81□□□□□ -2.12
RC3H1-204ENST00000479099 REV3LO60673 3130 aa1.8□□□□□ -2.12
RC3H1-204ENST00000479099 TTC28Q96AY4 2481 aa1.8□□□□□ -2.12
RC3H1-204ENST00000479099 ZNF292O60281 2723 aa1.8□□□□□ -2.12
RC3H1-204ENST00000479099 KNL1Q8NG31 2342 aa1.79□□□□□ -2.12
RC3H1-204ENST00000479099 WFDC10BQ8IUB3 73 aa1.79□□□□□ -2.12
RC3H1-204ENST00000479099 MUC6Q6W4X9 2439 aa1.77□□□□□ -2.13
RC3H1-204ENST00000479099 H3BUA1 57 aa1.77□□□□□ -2.13
RC3H1-204ENST00000479099 POLQO75417 2590 aa1.77□□□□□ -2.13
RC3H1-204ENST00000479099 IGF2RP11717 2491 aa1.76□□□□□ -2.13
RC3H1-204ENST00000479099 GVINP1Q7Z2Y8 2422 aa1.76□□□□□ -2.13
RC3H1-204ENST00000479099 IGLV5-48A0A075B6I7 105 aa1.75□□□□□ -2.13
RC3H1-204ENST00000479099 KAAG1Q9UBP8 84 aa1.75□□□□□ -2.13
RC3H1-204ENST00000479099 PCNX1Q96RV3 2341 aa1.74□□□□□ -2.13
RC3H1-204ENST00000479099 S4R3F8 94 aa1.73□□□□□ -2.13
RC3H1-204ENST00000479099 F8P00451 2351 aa1.72□□□□□ -2.13
RC3H1-204ENST00000479099 DEFB109BQ30KR1 87 aa1.72□□□□□ -2.13
RC3H1-204ENST00000479099 HELZ2Q9BYK8 2649 aaKnown RBP1.72□□□□□ -2.13
RC3H1-204ENST00000479099 TPRP12270 2363 aaKnown RBP1.72□□□□□ -2.13
RC3H1-204ENST00000479099 ABCA12Q86UK0 2595 aa1.71□□□□□ -2.14
RC3H1-204ENST00000479099 DSPP15924 2871 aaKnown RBP1.71□□□□□ -2.14
RC3H1-204ENST00000479099 PDE4DIPQ5VU43 2346 aa1.69□□□□□ -2.14
RC3H1-204ENST00000479099 DEFB131AP59861 70 aa1.69□□□□□ -2.14
RC3H1-204ENST00000479099 CHD9Q3L8U1 2897 aa1.69□□□□□ -2.14
RC3H1-204ENST00000479099 CELSR2Q9HCU4 2923 aa1.68□□□□□ -2.14
RC3H1-204ENST00000479099 PRLHP81277 87 aa1.67□□□□□ -2.14
RC3H1-204ENST00000479099 ABCA2Q9BZC7 2435 aa1.67□□□□□ -2.14
RC3H1-204ENST00000479099 MMP24-AS1A0A0U1RRL7 71 aa1.66□□□□□ -2.14
RC3H1-204ENST00000479099 DEFB106AQ8N104 65 aa1.66□□□□□ -2.14
RC3H1-204ENST00000479099 CSPG4Q6UVK1 2322 aa1.66□□□□□ -2.14
RC3H1-204ENST00000479099 TRANK1O15050 2925 aa1.64□□□□□ -2.15
RC3H1-204ENST00000479099 POLR2KP53803 58 aaKnown RBP1.63□□□□□ -2.15
RC3H1-204ENST00000479099 AKAP6Q13023 2319 aa1.58□□□□□ -2.16
RC3H1-204ENST00000479099 CSMD3Q7Z407 3707 aa1.58□□□□□ -2.16
RC3H1-204ENST00000479099 CRCT1Q9UGL9 99 aa1.58□□□□□ -2.16
RC3H1-204ENST00000479099 RPL39P62891 51 aaKnown RBP1.56□□□□□ -2.16
RC3H1-204ENST00000479099 NOP10Q9NPE3 64 aaKnown RBP1.56□□□□□ -2.16
RC3H1-204ENST00000479099 BDP1A6H8Y1 2624 aa1.56□□□□□ -2.16
RC3H1-204ENST00000479099 SPINK6Q6UWN8 80 aa1.55□□□□□ -2.16
RC3H1-204ENST00000479099 SMR3AQ99954 134 aa1.55□□□□□ -2.16
RC3H1-204ENST00000479099 TENM4Q6N022 2769 aa1.54□□□□□ -2.16
RC3H1-204ENST00000479099 VWFP04275 2813 aa1.53□□□□□ -2.16
RC3H1-204ENST00000479099 ATRQ13535 2644 aa1.52□□□□□ -2.17
RC3H1-204ENST00000479099 ANK2Q01484 3957 aa1.51□□□□□ -2.17
RC3H1-204ENST00000479099 ARHGAP5-AS1Q96IT6 56 aa1.51□□□□□ -2.17
RC3H1-204ENST00000479099 PRRC2CQ9Y520 2896 aaKnown RBP1.5□□□□□ -2.17
RC3H1-204ENST00000479099 RPL39LQ96EH5 51 aaKnown RBP1.5□□□□□ -2.17
RC3H1-204ENST00000479099 PIEZO1Q92508 2521 aa1.49□□□□□ -2.17
RC3H1-204ENST00000479099 KRTAP4-1Q9BYQ7 146 aa1.49□□□□□ -2.17
RC3H1-204ENST00000479099 CHD6Q8TD26 2715 aa1.49□□□□□ -2.17
RC3H1-204ENST00000479099 DEFB135Q30KP9 77 aa1.48□□□□□ -2.17
RC3H1-204ENST00000479099 FBN2P35556 2912 aa1.48□□□□□ -2.17
RC3H1-204ENST00000479099 SPTA1P02549 2419 aa1.48□□□□□ -2.17
RC3H1-204ENST00000479099 A0A0C4DFX4 3053 aa1.48□□□□□ -2.17
RC3H1-204ENST00000479099 CLPSL2Q6UWE3 100 aa1.47□□□□□ -2.17
RC3H1-204ENST00000479099 CEP290O15078 2479 aa1.47□□□□□ -2.17
RC3H1-204ENST00000479099 H0YGG7 62 aa1.46□□□□□ -2.18
RC3H1-204ENST00000479099 M0R2T5 61 aa1.45□□□□□ -2.18
RC3H1-204ENST00000479099 KRTAP2-3P0C7H8 128 aa1.45□□□□□ -2.18
RC3H1-204ENST00000479099 KRTAP19-3Q7Z4W3 81 aa1.45□□□□□ -2.18
RC3H1-204ENST00000479099 KRTAP2-4Q9BYR9 128 aa1.45□□□□□ -2.18
RC3H1-204ENST00000479099 KRTAP2-1Q9BYU5 128 aa1.45□□□□□ -2.18
RC3H1-204ENST00000479099 CELSR1Q9NYQ6 3014 aa1.45□□□□□ -2.18
RC3H1-204ENST00000479099 AKAP13Q12802 2813 aa1.44□□□□□ -2.18
RC3H1-204ENST00000479099 FRAS1Q86XX4 4008 aa1.44□□□□□ -2.18
RC3H1-204ENST00000479099 NCOR1O75376 2440 aa1.43□□□□□ -2.18
RC3H1-204ENST00000479099 A8MTW9 85 aa1.43□□□□□ -2.18
RC3H1-204ENST00000479099 M0QY20 66 aa1.43□□□□□ -2.18
RC3H1-204ENST00000479099 SPINK1P00995 79 aa1.43□□□□□ -2.18
RC3H1-204ENST00000479099 PKD1L2Q7Z442 2459 aa1.42□□□□□ -2.18
RC3H1-204ENST00000479099 HECTD1Q9ULT8 2610 aa1.42□□□□□ -2.18
RC3H1-204ENST00000479099 BSNQ9UPA5 3926 aa1.42□□□□□ -2.18
RC3H1-204ENST00000479099 EP300Q09472 2414 aaPredicted RBP1.41□□□□□ -2.18
RC3H1-204ENST00000479099 OTOGQ6ZRI0 2925 aa1.39□□□□□ -2.19
RC3H1-204ENST00000479099 LEAP2Q969E1 77 aa1.39□□□□□ -2.19
RC3H1-204ENST00000479099 FCGBPQ9Y6R7 5405 aaPredicted RBP1.39□□□□□ -2.19
RC3H1-204ENST00000479099 PRKDCP78527 4128 aaKnown RBP1.38□□□□□ -2.19
RC3H1-204ENST00000479099 ZNF469Q96JG9 3925 aaPredicted RBP1.37□□□□□ -2.19
RC3H1-204ENST00000479099 U3KQA8 63 aa1.37□□□□□ -2.19
RC3H1-204ENST00000479099 CHD8Q9HCK8 2581 aa1.36□□□□□ -2.19
RC3H1-204ENST00000479099 APCP25054 2843 aa1.35□□□□□ -2.19
RC3H1-204ENST00000479099 TNXBP22105 4242 aa1.35□□□□□ -2.19
RC3H1-204ENST00000479099 SRRM2Q9UQ35 2752 aaKnown RBP1.35□□□□□ -2.19
RC3H1-204ENST00000479099 TNRC18O15417 2968 aaPredicted RBP1.34□□□□□ -2.19
RC3H1-204ENST00000479099 FAT2Q9NYQ8 4349 aa1.33□□□□□ -2.2
RC3H1-204ENST00000479099 M0QZ58 72 aa1.33□□□□□ -2.2
RC3H1-204ENST00000479099 LINC01590Q5TEZ4 76 aa1.32□□□□□ -2.2
RC3H1-204ENST00000479099 TTTY10Q9BZA0 68 aa1.32□□□□□ -2.2
RC3H1-204ENST00000479099 CREBBPQ92793 2442 aa1.31□□□□□ -2.2
RC3H1-204ENST00000479099 PRM1P04553 51 aa1.3□□□□□ -2.2
RC3H1-204ENST00000479099 TOMM7Q9P0U1 55 aa1.3□□□□□ -2.2
RC3H1-204ENST00000479099 FBN3Q75N90 2809 aa1.3□□□□□ -2.2
RC3H1-204ENST00000479099 UBR5O95071 2799 aaPredicted RBP1.29□□□□□ -2.2
RC3H1-204ENST00000479099 LYSTQ99698 3801 aa1.28□□□□□ -2.2
RC3H1-204ENST00000479099 NBASA2RRP1 2371 aa1.27□□□□□ -2.21
RC3H1-204ENST00000479099 C9orf92A6NGG3 77 aa1.27□□□□□ -2.21
RC3H1-204ENST00000479099 NAV2Q8IVL1 2488 aa1.25□□□□□ -2.21
RC3H1-204ENST00000479099 WNK1Q9H4A3 2382 aa1.25□□□□□ -2.21
RC3H1-204ENST00000479099 NOTCH1P46531 2555 aa1.24□□□□□ -2.21
RC3H1-204ENST00000479099 PRCDQ00LT1 54 aa1.24□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms