RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 NWD1Q149M9 1564 aa-1□□□□□ -2.57
HPS3-205ENST00000478525 CC2D2AQ9P2K1 1620 aa-1□□□□□ -2.57
HPS3-205ENST00000478525 DDX60LQ5H9U9 1706 aaKnown RBP-1.01□□□□□ -2.57
HPS3-205ENST00000478525 ANKRD36CQ5JPF3 1778 aa-1.01□□□□□ -2.57
HPS3-205ENST00000478525 SPTAN1Q13813 2472 aaKnown RBP-1.01□□□□□ -2.57
HPS3-205ENST00000478525 MMP24-AS1A0A0U1RRL7 71 aa-1.01□□□□□ -2.57
HPS3-205ENST00000478525 ATOX1O00244 68 aa-1.01□□□□□ -2.57
HPS3-205ENST00000478525 MT1EP04732 61 aa-1.01□□□□□ -2.57
HPS3-205ENST00000478525 IFI6P09912 130 aa-1.01□□□□□ -2.57
HPS3-205ENST00000478525 GTF2H5Q6ZYL4 71 aa-1.01□□□□□ -2.57
HPS3-205ENST00000478525 EPRSP07814 1512 aaKnown RBP-1.01□□□□□ -2.57
HPS3-205ENST00000478525 PRDM15P57071 1507 aaPredicted RBP-1.01□□□□□ -2.57
HPS3-205ENST00000478525 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.01□□□□□ -2.57
HPS3-205ENST00000478525 POLR1AO95602 1720 aaPredicted RBP-1.01□□□□□ -2.57
HPS3-205ENST00000478525 DNAH5Q8TE73 4624 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 UQCRHLA0A096LP55 91 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 F8WEM9 126 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 LYNX1G3V0Z9 82 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 NDUFA2O43678 99 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 NDUFB1O75438 58 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 TNP1P09430 55 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 ASIPP42127 132 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 S100A12P80511 92 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 PLGLAQ15195 96 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 CDC42BPAQ5VT25 1732 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 LRRC7Q96NW7 1537 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 DNAH17Q9UFH2 4485 aa-1.02□□□□□ -2.57
HPS3-205ENST00000478525 RANBP2P49792 3224 aaKnown RBP-1.02□□□□□ -2.57
HPS3-205ENST00000478525 PZPP20742 1482 aa-1.03□□□□□ -2.57
HPS3-205ENST00000478525 CORTO00230 105 aa-1.03□□□□□ -2.57
HPS3-205ENST00000478525 HMGA1P17096 107 aaKnown RBP-1.03□□□□□ -2.57
HPS3-205ENST00000478525 KRTAP20-1Q3LI63 56 aa-1.03□□□□□ -2.57
HPS3-205ENST00000478525 MT1LQ93083 61 aa-1.03□□□□□ -2.57
HPS3-205ENST00000478525 CSMD1Q96PZ7 3565 aa-1.03□□□□□ -2.58
HPS3-205ENST00000478525 ROCK2O75116 1388 aaKnown RBP-1.04□□□□□ -2.58
HPS3-205ENST00000478525 IQCF6A8MYZ5 107 aa-1.04□□□□□ -2.58
HPS3-205ENST00000478525 GNGT2O14610 69 aa-1.04□□□□□ -2.58
HPS3-205ENST00000478525 S100PP25815 95 aa-1.04□□□□□ -2.58
HPS3-205ENST00000478525 RPL13AP3Q6NVV1 102 aa-1.04□□□□□ -2.58
HPS3-205ENST00000478525 DEFB106AQ8N104 65 aa-1.04□□□□□ -2.58
HPS3-205ENST00000478525 TMEM203Q969S6 136 aa-1.04□□□□□ -2.58
HPS3-205ENST00000478525 RGPD1P0DJD0 1748 aa-1.04□□□□□ -2.58
HPS3-205ENST00000478525 ITSN1Q15811 1721 aa-1.04□□□□□ -2.58
HPS3-205ENST00000478525 FANCAO15360 1455 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 TEX14Q8IWB6 1497 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 SMG1Q96Q15 3661 aaKnown RBP-1.05□□□□□ -2.58
HPS3-205ENST00000478525 LOC105371267A0A1B0GV96 52 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 HMGN1P05114 100 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 LINC00032P0C843 101 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 IAPPP10997 89 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 S100A1P23297 94 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 PMCHL2Q9BQD1 86 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 ATP7BP35670 1465 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 FYCO1Q9BQS8 1478 aa-1.05□□□□□ -2.58
HPS3-205ENST00000478525 TOGARAM1Q9Y4F4 1720 aa-1.06□□□□□ -2.58
HPS3-205ENST00000478525 PLIN4Q96Q06 1357 aa-1.06□□□□□ -2.58
HPS3-205ENST00000478525 DMXL2Q8TDJ6 3036 aa-1.06□□□□□ -2.58
HPS3-205ENST00000478525 LCE6AA0A183 80 aa-1.06□□□□□ -2.58
HPS3-205ENST00000478525 EFCAB10A6NFE3 127 aa-1.06□□□□□ -2.58
HPS3-205ENST00000478525 SMR3BP02814 79 aaPredicted RBP-1.06□□□□□ -2.58
HPS3-205ENST00000478525 WFDC9Q8NEX5 89 aa-1.06□□□□□ -2.58
HPS3-205ENST00000478525 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.06□□□□□ -2.58
HPS3-205ENST00000478525 PARP4Q9UKK3 1724 aaKnown RBP-1.06□□□□□ -2.58
HPS3-205ENST00000478525 MRPL33O75394 65 aaKnown RBP-1.07□□□□□ -2.58
HPS3-205ENST00000478525 HMGN2P05204 90 aaKnown RBP-1.07□□□□□ -2.58
HPS3-205ENST00000478525 PEA15Q15121 130 aa-1.07□□□□□ -2.58
HPS3-205ENST00000478525 COL5A1-AS1Q5SY13 56 aa-1.07□□□□□ -2.58
HPS3-205ENST00000478525 KRTAP8-1Q8IUC2 63 aa-1.07□□□□□ -2.58
HPS3-205ENST00000478525 GNG8Q9UK08 70 aa-1.07□□□□□ -2.58
HPS3-205ENST00000478525 CCDC88BA6NC98 1476 aa-1.07□□□□□ -2.58
HPS3-205ENST00000478525 NRXN1Q9ULB1 1477 aa-1.07□□□□□ -2.58
HPS3-205ENST00000478525 ATMQ13315 3056 aa-1.08□□□□□ -2.58
HPS3-205ENST00000478525 ADGRG4Q8IZF6 3080 aa-1.08□□□□□ -2.58
HPS3-205ENST00000478525 DOT1LQ8TEK3 1739 aa-1.08□□□□□ -2.58
HPS3-205ENST00000478525 DEFB130BP0DP73 79 aa-1.08□□□□□ -2.58
HPS3-205ENST00000478525 DEFB130AP0DP74 79 aa-1.08□□□□□ -2.58
HPS3-205ENST00000478525 NOP10Q9NPE3 64 aaKnown RBP-1.08□□□□□ -2.58
HPS3-205ENST00000478525 ATP10BO94823 1461 aa-1.08□□□□□ -2.58
HPS3-205ENST00000478525 ZNF831Q5JPB2 1677 aa-1.08□□□□□ -2.58
HPS3-205ENST00000478525 SPENQ96T58 3664 aaKnown RBP-1.09□□□□□ -2.58
HPS3-205ENST00000478525 TRAV21A0A0B4J279 112 aa-1.09□□□□□ -2.58
HPS3-205ENST00000478525 DLEU1O43261 78 aa-1.09□□□□□ -2.58
HPS3-205ENST00000478525 IFI27P40305 119 aaPredicted RBP-1.09□□□□□ -2.58
HPS3-205ENST00000478525 BVES-AS1Q5T3Y7 98 aa-1.09□□□□□ -2.58
HPS3-205ENST00000478525 FAM107BQ9H098 131 aa-1.09□□□□□ -2.58
HPS3-205ENST00000478525 BOD1L1Q8NFC6 3051 aa-1.09□□□□□ -2.58
HPS3-205ENST00000478525 DNAH10Q8IVF4 4471 aa-1.09□□□□□ -2.58
HPS3-205ENST00000478525 PPLO60437 1756 aa-1.09□□□□□ -2.58
HPS3-205ENST00000478525 ARFGEF2Q9Y6D5 1785 aa-1.09□□□□□ -2.58
HPS3-205ENST00000478525 MYO3AQ8NEV4 1616 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 SPTBN5Q9NRC6 3674 aaKnown RBP-1.1□□□□□ -2.59
HPS3-205ENST00000478525 IGLV5-48A0A075B6I7 105 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 H3BUA1 57 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 MT1GP13640 62 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 FAUP35544 74 aaKnown RBP-1.1□□□□□ -2.59
HPS3-205ENST00000478525 MT1MQ8N339 61 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 ACBD7Q8N6N7 88 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 DPY30Q9C005 99 aa-1.1□□□□□ -2.59
HPS3-205ENST00000478525 TLN1Q9Y490 2541 aaKnown RBP-1.1□□□□□ -2.59
HPS3-205ENST00000478525 LY75O60449 1722 aa-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms