RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 TAX1BP3O14907 124 aa9.04□□□□□ -0.96
SEC13-215ENST00000477547 DNAL4O96015 105 aa9.04□□□□□ -0.96
SEC13-215ENST00000477547 LYRM7Q5U5X0 104 aa9.04□□□□□ -0.96
SEC13-215ENST00000477547 TYMSOSQ8TAI1 123 aa9.04□□□□□ -0.96
SEC13-215ENST00000477547 KRTAP10-8P60410 259 aa9.03□□□□□ -0.96
SEC13-215ENST00000477547 COL5A1-AS1Q5SY13 56 aa9.03□□□□□ -0.96
SEC13-215ENST00000477547 C9orf118A6NHY6 69 aa9.02□□□□□ -0.97
SEC13-215ENST00000477547 LST1O00453 97 aa9.02□□□□□ -0.97
SEC13-215ENST00000477547 MOBPQ13875 183 aa9.02□□□□□ -0.97
SEC13-215ENST00000477547 C9orf153Q5TBE3 101 aa9.02□□□□□ -0.97
SEC13-215ENST00000477547 Q8N377 158 aa9.02□□□□□ -0.97
SEC13-215ENST00000477547 TNXBP22105 4242 aa9.01□□□□□ -0.97
SEC13-215ENST00000477547 LAMTOR3Q9UHA4 124 aa9.01□□□□□ -0.97
SEC13-215ENST00000477547 OCIAD2Q56VL3 154 aa9□□□□□ -0.97
SEC13-215ENST00000477547 Q8NBF4 154 aa9□□□□□ -0.97
SEC13-215ENST00000477547 TRACP01848 142 aa8.99□□□□□ -0.97
SEC13-215ENST00000477547 PPDPFLQ8WWR9 84 aa8.99□□□□□ -0.97
SEC13-215ENST00000477547 TCL1BO95988 128 aa8.98□□□□□ -0.97
SEC13-215ENST00000477547 ATXN8Q156A1 80 aa8.98□□□□□ -0.97
SEC13-215ENST00000477547 SMIM29Q86T20 159 aa8.98□□□□□ -0.97
SEC13-215ENST00000477547 A0A1W2PPM0 123 aa8.97□□□□□ -0.97
SEC13-215ENST00000477547 F8WEM9 126 aa8.97□□□□□ -0.97
SEC13-215ENST00000477547 ORMDL1Q9P0S3 153 aa8.97□□□□□ -0.97
SEC13-215ENST00000477547 GHRHP01286 108 aa8.96□□□□□ -0.98
SEC13-215ENST00000477547 FABP2P12104 132 aa8.95□□□□□ -0.98
SEC13-215ENST00000477547 LINC00304Q8N9R0 145 aa8.95□□□□□ -0.98
SEC13-215ENST00000477547 TRBV20-1A0A075B6N2 111 aa8.94□□□□□ -0.98
SEC13-215ENST00000477547 SSBP3-AS1Q7Z2R9 100 aa8.92□□□□□ -0.98
SEC13-215ENST00000477547 H3BQ85 93 aa8.91□□□□□ -0.98
SEC13-215ENST00000477547 NDUFV3P56181 108 aaKnown RBP8.9□□□□□ -0.98
SEC13-215ENST00000477547 SPCS1Q9Y6A9 102 aa8.89□□□□□ -0.99
SEC13-215ENST00000477547 TMEM256-PLSCR3K7ERE1 68 aa8.88□□□□□ -0.99
SEC13-215ENST00000477547 C4orf48Q5BLP8 95 aa8.88□□□□□ -0.99
SEC13-215ENST00000477547 C9JAW5 83 aa8.87□□□□□ -0.99
SEC13-215ENST00000477547 IGLV8-61A0A075B6I0 122 aa8.86□□□□□ -0.99
SEC13-215ENST00000477547 A0A1B0GV72 72 aa8.86□□□□□ -0.99
SEC13-215ENST00000477547 SPAG11AQ6PDA7 123 aa8.86□□□□□ -0.99
SEC13-215ENST00000477547 A0A0G2JQZ4 141 aa8.85□□□□□ -0.99
SEC13-215ENST00000477547 BAALC-AS2P0C853 105 aa8.85□□□□□ -0.99
SEC13-215ENST00000477547 UBE2V1Q13404 147 aa8.85□□□□□ -0.99
SEC13-215ENST00000477547 Q6JHZ5 121 aa8.85□□□□□ -0.99
SEC13-215ENST00000477547 H3BMG7 143 aa8.84□□□□□ -0.99
SEC13-215ENST00000477547 K7EP34 96 aa8.83□□□□□ -1
SEC13-215ENST00000477547 IGFL1Q6UW32 110 aa8.83□□□□□ -1
SEC13-215ENST00000477547 HRCT1Q6UXD1 115 aa8.83□□□□□ -1
SEC13-215ENST00000477547 MTURNQ8N3F0 131 aa8.83□□□□□ -1
SEC13-215ENST00000477547 ANKRD29Q8N6D5 301 aa8.83□□□□□ -1
SEC13-215ENST00000477547 SPINK1P00995 79 aa8.82□□□□□ -1
SEC13-215ENST00000477547 CD164Q04900 197 aa8.8□□□□□ -1
SEC13-215ENST00000477547 H3BT86 120 aa8.8□□□□□ -1
SEC13-215ENST00000477547 RPS29P62273 56 aaKnown RBP8.8□□□□□ -1
SEC13-215ENST00000477547 GTF2H5Q6ZYL4 71 aa8.78□□□□□ -1
SEC13-215ENST00000477547 LIMD2Q9BT23 127 aa8.78□□□□□ -1
SEC13-215ENST00000477547 KRTAP3-3Q9BYR6 98 aa8.78□□□□□ -1
SEC13-215ENST00000477547 KRTAP3-2Q9BYR7 98 aa8.78□□□□□ -1
SEC13-215ENST00000477547 KRTAP9-2Q9BYQ4 174 aa8.77□□□□□ -1.01
SEC13-215ENST00000477547 RBM3P98179 157 aaKnown RBP8.76□□□□□ -1.01
SEC13-215ENST00000477547 RETNLBQ9BQ08 111 aa8.76□□□□□ -1.01
SEC13-215ENST00000477547 TRBV7-7A0A0K0K1E9 115 aa8.74□□□□□ -1.01
SEC13-215ENST00000477547 JMJD7-PLA2G4BH0Y9G9 81 aa8.74□□□□□ -1.01
SEC13-215ENST00000477547 DSCR8Q96T75 97 aa8.74□□□□□ -1.01
SEC13-215ENST00000477547 LPAP08519 4548 aa8.73□□□□□ -1.01
SEC13-215ENST00000477547 TRBV7-4A0A0J9YYF1 115 aa8.73□□□□□ -1.01
SEC13-215ENST00000477547 Q6Q795 121 aa8.72□□□□□ -1.01
SEC13-215ENST00000477547 TEN1Q86WV5 123 aa8.72□□□□□ -1.01
SEC13-215ENST00000477547 A0A1W2PNM2 257 aa8.71□□□□□ -1.02
SEC13-215ENST00000477547 PRO0461Q9UI25 63 aa8.71□□□□□ -1.02
SEC13-215ENST00000477547 CCKP06307 115 aa8.7□□□□□ -1.02
SEC13-215ENST00000477547 SMCPP49901 116 aaPredicted RBP8.7□□□□□ -1.02
SEC13-215ENST00000477547 PRR4Q16378 134 aa8.7□□□□□ -1.02
SEC13-215ENST00000477547 VPS25Q9BRG1 176 aa8.7□□□□□ -1.02
SEC13-215ENST00000477547 C14orf132Q9NPU4 83 aa8.7□□□□□ -1.02
SEC13-215ENST00000477547 Q5XG85 94 aa8.69□□□□□ -1.02
SEC13-215ENST00000477547 OBSCN-AS1Q96MR7 158 aa8.68□□□□□ -1.02
SEC13-215ENST00000477547 A0A087WSZ3 146 aa8.67□□□□□ -1.02
SEC13-215ENST00000477547 LOC110117498A0A087WWA1 95 aa8.67□□□□□ -1.02
SEC13-215ENST00000477547 SS18L2Q9UHA2 77 aa8.67□□□□□ -1.02
SEC13-215ENST00000477547 A0A1B0GV90 55 aa8.66□□□□□ -1.02
SEC13-215ENST00000477547 Q6ZQT0 140 aa8.66□□□□□ -1.02
SEC13-215ENST00000477547 PDE6GP18545 87 aa8.65□□□□□ -1.02
SEC13-215ENST00000477547 KRTAP9-6A0A140TA67 174 aa8.64□□□□□ -1.03
SEC13-215ENST00000477547 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
SEC13-215ENST00000477547 F8W1H4 67 aa8.63□□□□□ -1.03
SEC13-215ENST00000477547 ASB16-AS1Q495Z4 193 aa8.62□□□□□ -1.03
SEC13-215ENST00000477547 FAT4Q6V0I7 4981 aa8.62□□□□□ -1.03
SEC13-215ENST00000477547 IGLV7-46A0A075B6I9 117 aa8.61□□□□□ -1.03
SEC13-215ENST00000477547 C1orf195Q5TG92 126 aa8.61□□□□□ -1.03
SEC13-215ENST00000477547 MUC2Q02817 5179 aa8.61□□□□□ -1.03
SEC13-215ENST00000477547 C21orf62-AS1Q17RA5 79 aa8.6□□□□□ -1.03
SEC13-215ENST00000477547 ETDBQ3ZM63 59 aa8.56□□□□□ -1.04
SEC13-215ENST00000477547 A0A1B0GW54 56 aa8.54□□□□□ -1.04
SEC13-215ENST00000477547 TPRXLQ17RH7 258 aa8.54□□□□□ -1.04
SEC13-215ENST00000477547 Q96NJ1 140 aa8.54□□□□□ -1.04
SEC13-215ENST00000477547 SIGMAR1Q99720 223 aa8.53□□□□□ -1.04
SEC13-215ENST00000477547 KRTAP13-3Q3SY46 172 aa8.51□□□□□ -1.05
SEC13-215ENST00000477547 LINC00472Q9H8W2 130 aa8.49□□□□□ -1.05
SEC13-215ENST00000477547 IGKV4-1P06312 121 aa8.48□□□□□ -1.05
SEC13-215ENST00000477547 DEFB116Q30KQ4 102 aa8.47□□□□□ -1.05
SEC13-215ENST00000477547 CDIP1Q9H305 208 aa8.47□□□□□ -1.05
SEC13-215ENST00000477547 C9orf92A6NGG3 77 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms