RNA–Protein interactions for RNA: ENST00000477434.5

PDZRN3-206, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 4

Gene PDZRN3, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-206ENST00000477434 DPH3Q96FX2 82 aa2.39□□□□□ -2.03
PDZRN3-206ENST00000477434 IGKV2-28A0A075B6P5 120 aa2.38□□□□□ -2.03
PDZRN3-206ENST00000477434 TRBV10-2A0A0K0K1G8 114 aa2.38□□□□□ -2.03
PDZRN3-206ENST00000477434 IGKV2D-28P01615 120 aa2.38□□□□□ -2.03
PDZRN3-206ENST00000477434 FXYD2P54710 66 aa2.38□□□□□ -2.03
PDZRN3-206ENST00000477434 PRR3P79522 188 aaKnown RBP2.38□□□□□ -2.03
PDZRN3-206ENST00000477434 BVES-AS1Q5T3Y7 98 aa2.38□□□□□ -2.03
PDZRN3-206ENST00000477434 PLAC8Q9NZF1 115 aa2.38□□□□□ -2.03
PDZRN3-206ENST00000477434 C22orf24Q9Y442 160 aa2.38□□□□□ -2.03
PDZRN3-206ENST00000477434 TRAV13-2A0A0B4J235 113 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 A0A0B4J2C4 111 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 A0A0U1RQV1 116 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 A0A1B0GWB2 263 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 M0R143 59 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 M0R378 163 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 IGLV6-57P01721 117 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 HINT1P49773 126 aaPredicted RBP2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 MRPL55Q7Z7F7 128 aaKnown RBP2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 LINC00337Q8N6G1 96 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 NKAPP1Q8N9T2 125 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 C7orf33Q8WU49 177 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 TMEM126AQ9H061 195 aa2.37□□□□□ -2.03
PDZRN3-206ENST00000477434 IGLV1-50A0A075B6I6 118 aa2.36□□□□□ -2.03
PDZRN3-206ENST00000477434 PCP4L1A6NKN8 68 aa2.36□□□□□ -2.03
PDZRN3-206ENST00000477434 M0QXV9 152 aa2.36□□□□□ -2.03
PDZRN3-206ENST00000477434 RPL37AP61513 92 aaKnown RBP2.36□□□□□ -2.03
PDZRN3-206ENST00000477434 S100A7L2Q5SY68 101 aa2.36□□□□□ -2.03
PDZRN3-206ENST00000477434 PHF5AQ7RTV0 110 aaKnown RBP2.36□□□□□ -2.03
PDZRN3-206ENST00000477434 FAM19A5Q7Z5A7 132 aaPredicted RBP2.36□□□□□ -2.03
PDZRN3-206ENST00000477434 PRO1854Q9UHT4 67 aa2.36□□□□□ -2.03
PDZRN3-206ENST00000477434 TRBV10-3A0A0K0K1G6 114 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 A6NDN8 102 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 NCR3O14931 201 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 OXTP01178 125 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 PRR4Q16378 134 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 OR13C6PQ8NH95 151 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 RAB37Q96AX2 223 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 SNHG12Q9BXW3 62 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 KCNQ1DNQ9H478 68 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 NHP2Q9NX24 153 aaKnown RBP2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 CBY1Q9Y3M2 126 aa2.35□□□□□ -2.03
PDZRN3-206ENST00000477434 TRAV23DV6A0A075B6W5 121 aa2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 KRTAP4-16G5E9R7 235 aaPredicted RBP2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 K7ERJ3 54 aa2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 ZNF73O43830 326 aaPredicted RBP2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 ZNF861PO60384 105 aa2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 SPRR1AP35321 89 aa2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 RPL28P46779 137 aaKnown RBP2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 UBE2BP63146 152 aa2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 BATFQ16520 125 aa2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 SMIM11BQ8TCY0 68 aa2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 PSORS1C2Q9UIG4 136 aa2.34□□□□□ -2.03
PDZRN3-206ENST00000477434 TRBV7-6A0A0J9YX20 115 aa2.33□□□□□ -2.04
PDZRN3-206ENST00000477434 RPL13AP40429 203 aaKnown RBP2.33□□□□□ -2.04
PDZRN3-206ENST00000477434 COL5A1-AS1Q5SY13 56 aa2.33□□□□□ -2.04
PDZRN3-206ENST00000477434 H0YGX0 51 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 H7C2G1 150 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 TAX1BP3O14907 124 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 BCE1O60756 84 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 TSPAN13O95857 204 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 COX6CP09669 75 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 ELOF1P60002 83 aaKnown RBP2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 VAMP3Q15836 100 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 C6orf99Q4VX62 202 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 C1orf137Q5JT78 98 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 KRTAP13-1Q8IUC0 172 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 DIRC1Q969H9 104 aa2.32□□□□□ -2.04
PDZRN3-206ENST00000477434 ETDCA0A1B0GVM5 59 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 H3BUT2 72 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 IGLV7-43P04211 117 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 COX7BP24311 80 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 PSMB2P49721 201 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 LCE1BQ5T7P3 118 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 Q6ZRX8 168 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 FAM19A1Q7Z5A9 133 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 Q8N9L7 120 aa2.31□□□□□ -2.04
PDZRN3-206ENST00000477434 A0A1W2PPM0 123 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 SCGB1C2P0DMR2 95 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 UBE2AP49459 152 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 PRLHP81277 87 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 LINC00575Q6W349 94 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 SMCR5Q8TEV8 140 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 LINC01600Q96MT4 127 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 Q9BRP9 147 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 LCE3DQ9BYE3 92 aa2.3□□□□□ -2.04
PDZRN3-206ENST00000477434 TRBV20-1A0A075B6N2 111 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 A0A1B0GX51 115 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 hADV29S1A0JD25 119 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 LST1O00453 97 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 SLC25A20O43772 301 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 SNCGO76070 127 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 TCL1BO95988 128 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 TRACP01848 142 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 FABP2P12104 132 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 LYRM7Q5U5X0 104 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 KRTAP5-2Q701N4 177 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 CLEC2BQ92478 149 aa2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 NAA38Q9BRA0 125 aaKnown RBP2.29□□□□□ -2.04
PDZRN3-206ENST00000477434 HIGD2AQ9BW72 106 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms