RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 HMCN2Q8NDA2 5059 aa17.11■□□□□ 0.33
HOXB3-208ENST00000476342 PPDPFLQ8WWR9 84 aa17.08■□□□□ 0.32
HOXB3-208ENST00000476342 OCIAD2Q56VL3 154 aa17.07■□□□□ 0.32
HOXB3-208ENST00000476342 SPINK1P00995 79 aa17.05■□□□□ 0.32
HOXB3-208ENST00000476342 F8WEM9 126 aa17.04■□□□□ 0.32
HOXB3-208ENST00000476342 CLEC2BQ92478 149 aa17.04■□□□□ 0.32
HOXB3-208ENST00000476342 GHRHP01286 108 aa17.02■□□□□ 0.31
HOXB3-208ENST00000476342 BATFQ16520 125 aa17■□□□□ 0.31
HOXB3-208ENST00000476342 SCGB1C2P0DMR2 95 aa16.99■□□□□ 0.31
HOXB3-208ENST00000476342 DNAL4O96015 105 aa16.98■□□□□ 0.31
HOXB3-208ENST00000476342 RPS29P62273 56 aaKnown RBP16.98■□□□□ 0.31
HOXB3-208ENST00000476342 SNHG12Q9BXW3 62 aa16.98■□□□□ 0.31
HOXB3-208ENST00000476342 PRR4Q16378 134 aa16.95■□□□□ 0.3
HOXB3-208ENST00000476342 RETNLBQ9BQ08 111 aa16.9■□□□□ 0.3
HOXB3-208ENST00000476342 CD164Q04900 197 aa16.89■□□□□ 0.29
HOXB3-208ENST00000476342 ORMDL1Q9P0S3 153 aa16.89■□□□□ 0.29
HOXB3-208ENST00000476342 IGLV8-61A0A075B6I0 122 aa16.88■□□□□ 0.29
HOXB3-208ENST00000476342 HRCT1Q6UXD1 115 aa16.88■□□□□ 0.29
HOXB3-208ENST00000476342 H3BQ85 93 aa16.87■□□□□ 0.29
HOXB3-208ENST00000476342 LST1O00453 97 aa16.87■□□□□ 0.29
HOXB3-208ENST00000476342 Q6JHZ5 121 aa16.87■□□□□ 0.29
HOXB3-208ENST00000476342 TRACP01848 142 aa16.87■□□□□ 0.29
HOXB3-208ENST00000476342 FABP2P12104 132 aa16.87■□□□□ 0.29
HOXB3-208ENST00000476342 NAA38Q9BRA0 125 aaKnown RBP16.86■□□□□ 0.29
HOXB3-208ENST00000476342 LIMD2Q9BT23 127 aa16.85■□□□□ 0.29
HOXB3-208ENST00000476342 NDUFV3P56181 108 aaKnown RBP16.84■□□□□ 0.29
HOXB3-208ENST00000476342 LYRM7Q5U5X0 104 aa16.82■□□□□ 0.28
HOXB3-208ENST00000476342 A0A0G2JQZ4 141 aa16.81■□□□□ 0.28
HOXB3-208ENST00000476342 TMEM256-PLSCR3K7ERE1 68 aa16.8■□□□□ 0.28
HOXB3-208ENST00000476342 IGFL1Q6UW32 110 aa16.79■□□□□ 0.28
HOXB3-208ENST00000476342 H3BUT2 72 aa16.78■□□□□ 0.28
HOXB3-208ENST00000476342 ATXN8Q156A1 80 aa16.77■□□□□ 0.27
HOXB3-208ENST00000476342 FP248Q71RG6 208 aaPredicted RBP16.77■□□□□ 0.27
HOXB3-208ENST00000476342 H3BMG7 143 aa16.75■□□□□ 0.27
HOXB3-208ENST00000476342 TCL1BO95988 128 aa16.75■□□□□ 0.27
HOXB3-208ENST00000476342 LRP2P98164 4655 aa16.75■□□□□ 0.27
HOXB3-208ENST00000476342 IGLV7-46A0A075B6I9 117 aa16.73■□□□□ 0.27
HOXB3-208ENST00000476342 C9orf118A6NHY6 69 aa16.72■□□□□ 0.27
HOXB3-208ENST00000476342 TAX1BP3O14907 124 aa16.72■□□□□ 0.27
HOXB3-208ENST00000476342 Q5XG85 94 aa16.7■□□□□ 0.26
HOXB3-208ENST00000476342 LPAP08519 4548 aa16.7■□□□□ 0.26
HOXB3-208ENST00000476342 UBE2V1Q13404 147 aa16.7■□□□□ 0.26
HOXB3-208ENST00000476342 TRBV20-1A0A075B6N2 111 aa16.69■□□□□ 0.26
HOXB3-208ENST00000476342 TRBV7-7A0A0K0K1E9 115 aa16.64■□□□□ 0.25
HOXB3-208ENST00000476342 PCP4L1A6NKN8 68 aa16.64■□□□□ 0.25
HOXB3-208ENST00000476342 BAALC-AS2P0C853 105 aa16.64■□□□□ 0.25
HOXB3-208ENST00000476342 A0A1W2PPM0 123 aa16.62■□□□□ 0.25
HOXB3-208ENST00000476342 TPRXLQ17RH7 258 aa16.62■□□□□ 0.25
HOXB3-208ENST00000476342 COL5A1-AS1Q5SY13 56 aa16.62■□□□□ 0.25
HOXB3-208ENST00000476342 Q6Q795 121 aa16.61■□□□□ 0.25
HOXB3-208ENST00000476342 A0A1B0GV72 72 aa16.6■□□□□ 0.25
HOXB3-208ENST00000476342 TEN1Q86WV5 123 aa16.6■□□□□ 0.25
HOXB3-208ENST00000476342 ANKRD29Q8N6D5 301 aa16.6■□□□□ 0.25
HOXB3-208ENST00000476342 RBM3P98179 157 aaKnown RBP16.53■□□□□ 0.24
HOXB3-208ENST00000476342 UBR4Q5T4S7 5183 aa16.52■□□□□ 0.24
HOXB3-208ENST00000476342 C9JAW5 83 aa16.52■□□□□ 0.23
HOXB3-208ENST00000476342 ASB16-AS1Q495Z4 193 aa16.52■□□□□ 0.23
HOXB3-208ENST00000476342 C1orf195Q5TG92 126 aa16.52■□□□□ 0.23
HOXB3-208ENST00000476342 CDIP1Q9H305 208 aa16.52■□□□□ 0.23
HOXB3-208ENST00000476342 SS18L2Q9UHA2 77 aa16.51■□□□□ 0.23
HOXB3-208ENST00000476342 A0A1W2PNM2 257 aa16.48■□□□□ 0.23
HOXB3-208ENST00000476342 KRTAP13-3Q3SY46 172 aa16.48■□□□□ 0.23
HOXB3-208ENST00000476342 DSCR8Q96T75 97 aa16.48■□□□□ 0.23
HOXB3-208ENST00000476342 TRBV7-4A0A0J9YYF1 115 aa16.46■□□□□ 0.23
HOXB3-208ENST00000476342 SPCS1Q9Y6A9 102 aa16.46■□□□□ 0.23
HOXB3-208ENST00000476342 A0A087WSZ3 146 aa16.45■□□□□ 0.22
HOXB3-208ENST00000476342 JMJD7-PLA2G4BH0Y9G9 81 aa16.45■□□□□ 0.22
HOXB3-208ENST00000476342 CCKP06307 115 aa16.45■□□□□ 0.22
HOXB3-208ENST00000476342 H3BT86 120 aa16.4■□□□□ 0.22
HOXB3-208ENST00000476342 VPS25Q9BRG1 176 aa16.36■□□□□ 0.21
HOXB3-208ENST00000476342 MTURNQ8N3F0 131 aa16.35■□□□□ 0.21
HOXB3-208ENST00000476342 PDE6GP18545 87 aa16.3■□□□□ 0.2
HOXB3-208ENST00000476342 LOC110117498A0A087WWA1 95 aa16.28■□□□□ 0.2
HOXB3-208ENST00000476342 K7EP34 96 aa16.28■□□□□ 0.2
HOXB3-208ENST00000476342 OBSCN-AS1Q96MR7 158 aa16.28■□□□□ 0.2
HOXB3-208ENST00000476342 Q6ZQT0 140 aa16.28■□□□□ 0.2
HOXB3-208ENST00000476342 C9orf92A6NGG3 77 aa16.27■□□□□ 0.19
HOXB3-208ENST00000476342 C21orf62-AS1Q17RA5 79 aa16.27■□□□□ 0.19
HOXB3-208ENST00000476342 C14orf132Q9NPU4 83 aa16.27■□□□□ 0.19
HOXB3-208ENST00000476342 XP32Q5T750 250 aa16.23■□□□□ 0.19
HOXB3-208ENST00000476342 Q96NJ1 140 aa16.23■□□□□ 0.19
HOXB3-208ENST00000476342 GTF2H5Q6ZYL4 71 aa16.22■□□□□ 0.19
HOXB3-208ENST00000476342 A0A1B0GW54 56 aa16.19■□□□□ 0.18
HOXB3-208ENST00000476342 SMCPP49901 116 aaPredicted RBP16.14■□□□□ 0.17
HOXB3-208ENST00000476342 SIGMAR1Q99720 223 aa16.14■□□□□ 0.17
HOXB3-208ENST00000476342 MUC17Q685J3 4493 aa16.13■□□□□ 0.17
HOXB3-208ENST00000476342 LINC00472Q9H8W2 130 aa16.13■□□□□ 0.17
HOXB3-208ENST00000476342 PRO0461Q9UI25 63 aa16.13■□□□□ 0.17
HOXB3-208ENST00000476342 RNF213Q63HN8 5207 aa16.12■□□□□ 0.17
HOXB3-208ENST00000476342 IGKV4-1P06312 121 aa16.11■□□□□ 0.17
HOXB3-208ENST00000476342 SEC61BP60468 96 aaKnown RBP16.11■□□□□ 0.17
HOXB3-208ENST00000476342 DEFB116Q30KQ4 102 aa16.06■□□□□ 0.16
HOXB3-208ENST00000476342 F8W1H4 67 aa16.02■□□□□ 0.15
HOXB3-208ENST00000476342 J3KT08 172 aa16■□□□□ 0.15
HOXB3-208ENST00000476342 RPL37P61927 97 aaKnown RBP15.95■□□□□ 0.14
HOXB3-208ENST00000476342 MUC2Q02817 5179 aa15.95■□□□□ 0.14
HOXB3-208ENST00000476342 NREPQ16612 68 aa15.94■□□□□ 0.14
HOXB3-208ENST00000476342 DSCR10P59022 87 aa15.92■□□□□ 0.14
HOXB3-208ENST00000476342 LINC00313P59037 77 aa15.91■□□□□ 0.14
HOXB3-208ENST00000476342 IGHV6-1A0A0B4J1U7 121 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms