RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CST9LQ9H4G1 147 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 C6orf48Q9UBA6 75 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 MUC17Q685J3 4493 aa1.44□□□□□ -2.18
PTCD3-211ENST00000476215 TRAV7A0A075B6U4 112 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 TGIF2-C20orf24A0A0A6YYL0 155 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 H7C2G1 150 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 K7EMI3 77 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 G0S2P27469 103 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 IFI27P40305 119 aaPredicted RBP1.43□□□□□ -2.18
PTCD3-211ENST00000476215 CKS1BP61024 79 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 TMEM141Q96I45 108 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 CDKN2A-AS1Q9UH64 79 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 LAMTOR2Q9Y2Q5 125 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 C22orf24Q9Y442 160 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 FAT4Q6V0I7 4981 aa1.43□□□□□ -2.18
PTCD3-211ENST00000476215 ADCYAP1P18509 176 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 RAB14P61106 215 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 UBE2BP63146 152 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 SEC11AP67812 179 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 COMMD7Q86VX2 200 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 Q8IZM0 81 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 TOMM6Q96B49 74 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 SCGB3A1Q96QR1 104 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 C2orf88Q9BSF0 95 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 MAP1LC3AQ9H492 121 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 XAGE1AQ9HD64 81 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 NXT2Q9NPJ8 142 aaKnown RBP1.42□□□□□ -2.18
PTCD3-211ENST00000476215 TOMM7Q9P0U1 55 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 CYSLTR1Q9Y271 337 aa1.42□□□□□ -2.18
PTCD3-211ENST00000476215 TRAV9-1A0A075B6T8 112 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 TMEM218A2RU14 115 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 LINC01546A6NGU7 62 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 LINC01549A6NIU2 74 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 F8VRH5 84 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 NUPR1O60356 82 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 BCE1O60756 84 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 RAB5BP61020 215 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 COX7B2Q8TF08 81 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 TP73-AS1Q9UF72 201 aa1.41□□□□□ -2.18
PTCD3-211ENST00000476215 SPINK8P0C7L1 97 aa1.4□□□□□ -2.19
PTCD3-211ENST00000476215 CRYGAP11844 174 aa1.4□□□□□ -2.19
PTCD3-211ENST00000476215 HIST1H4AP62805 103 aaKnown RBP1.4□□□□□ -2.19
PTCD3-211ENST00000476215 FABP9Q0Z7S8 132 aa1.4□□□□□ -2.19
PTCD3-211ENST00000476215 CLLU1Q5K131 121 aa1.4□□□□□ -2.19
PTCD3-211ENST00000476215 C7orf65Q6ZTY9 151 aa1.4□□□□□ -2.19
PTCD3-211ENST00000476215 CYSTM1Q9H1C7 97 aa1.4□□□□□ -2.19
PTCD3-211ENST00000476215 H3BRM9 83 aa1.39□□□□□ -2.19
PTCD3-211ENST00000476215 IGLC3P0DOY3 106 aa1.39□□□□□ -2.19
PTCD3-211ENST00000476215 S100PP25815 95 aa1.39□□□□□ -2.19
PTCD3-211ENST00000476215 NDUFA6P56556 154 aa1.39□□□□□ -2.19
PTCD3-211ENST00000476215 IFITM2Q01629 132 aa1.39□□□□□ -2.19
PTCD3-211ENST00000476215 FP248Q71RG6 208 aaPredicted RBP1.39□□□□□ -2.19
PTCD3-211ENST00000476215 PLEKHB2Q96CS7 222 aa1.39□□□□□ -2.19
PTCD3-211ENST00000476215 SEC11CQ9BY50 192 aa1.39□□□□□ -2.19
PTCD3-211ENST00000476215 IGKV2D-26A0A0A0MRZ7 120 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 TMEM238C9JI98 176 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 M0R378 163 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 CTAG1AP78358 180 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 COX17Q14061 63 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 BAGE3Q86Y29 109 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 TMEM126AQ9H061 195 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 SMCO4Q9NRQ5 59 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 ERG28Q9UKR5 140 aa1.38□□□□□ -2.19
PTCD3-211ENST00000476215 IGKV3D-7A0A0C4DH55 119 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 LST1O00453 97 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 LEPROTO15243 131 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 HBDP02042 147 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 LINC00158P58513 81 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 RHEBQ15382 184 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 PMCHL1Q16048 86 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 BATFQ16520 125 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 SPAG11AQ6PDA7 123 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 SFTA2Q6UW10 78 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 C18orf32Q8TCD1 76 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 RETNLBQ9BQ08 111 aa1.37□□□□□ -2.19
PTCD3-211ENST00000476215 TRAV12-1A0A0B4J245 112 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 LOC107984156A0A0G2JMH3 177 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 APOC3P02656 99 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 SMIM13P0DJ93 91 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 PRLHP81277 87 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 Q1T7F1 81 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 TMEM170BQ5T4T1 132 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 C1orf195Q5TG92 126 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 ARL17AQ8IVW1 177 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 IFI27L1Q96BM0 104 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 CHCHD1Q96BP2 118 aaKnown RBP1.36□□□□□ -2.19
PTCD3-211ENST00000476215 SPRR4Q96PI1 79 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 KCNQ1DNQ9H478 68 aa1.36□□□□□ -2.19
PTCD3-211ENST00000476215 TRBV10-3A0A0K0K1G6 114 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 MYMXA0A1B0GTQ4 84 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 ETDCA0A1B0GVM5 59 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 LINC00587B1AMM8 73 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 SPRR1AP35321 89 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 SSBP3-AS1Q7Z2R9 100 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 SVBPQ8N300 66 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 FAM19A2Q8N3H0 131 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 NDUFA12Q9UI09 145 aa1.35□□□□□ -2.19
PTCD3-211ENST00000476215 TRBV10-2A0A0K0K1G8 114 aa1.34□□□□□ -2.19
PTCD3-211ENST00000476215 ERC2-IT1O76042 136 aa1.34□□□□□ -2.19
PTCD3-211ENST00000476215 SPINK1P00995 79 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms