RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 SPANXA2-OT1Q8N9U9 137 aa3.6□□□□□ -1.83
CBWD1-212ENST00000475411 IGLV5-37A0A075B6J1 123 aa3.6□□□□□ -1.83
CBWD1-212ENST00000475411 IGHV6-1A0A0B4J1U7 121 aa3.6□□□□□ -1.83
CBWD1-212ENST00000475411 FAM229BQ4G0N7 80 aa3.59□□□□□ -1.83
CBWD1-212ENST00000475411 Q75L30 129 aa3.59□□□□□ -1.83
CBWD1-212ENST00000475411 VCANP13611 3396 aa3.59□□□□□ -1.84
CBWD1-212ENST00000475411 FAM168BA1KXE4 195 aa3.58□□□□□ -1.84
CBWD1-212ENST00000475411 COX6B2Q6YFQ2 88 aa3.58□□□□□ -1.84
CBWD1-212ENST00000475411 NOTCH1P46531 2555 aa3.58□□□□□ -1.84
CBWD1-212ENST00000475411 LITAFQ99732 161 aa3.58□□□□□ -1.84
CBWD1-212ENST00000475411 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
CBWD1-212ENST00000475411 SMG1Q96Q15 3661 aaKnown RBP3.57□□□□□ -1.84
CBWD1-212ENST00000475411 TRBV7-4A0A0J9YYF1 115 aa3.57□□□□□ -1.84
CBWD1-212ENST00000475411 OXTP01178 125 aa3.57□□□□□ -1.84
CBWD1-212ENST00000475411 IGLV6-57P01721 117 aa3.57□□□□□ -1.84
CBWD1-212ENST00000475411 C9orf129Q5T035 196 aaKnown RBP3.57□□□□□ -1.84
CBWD1-212ENST00000475411 A0A1W2PNN7 141 aa3.56□□□□□ -1.84
CBWD1-212ENST00000475411 LINC00313P59037 77 aa3.56□□□□□ -1.84
CBWD1-212ENST00000475411 A0A0A0MQY5 61 aa3.56□□□□□ -1.84
CBWD1-212ENST00000475411 EIF4EBP3O60516 100 aaPredicted RBP3.56□□□□□ -1.84
CBWD1-212ENST00000475411 AKAP9Q99996 3911 aa3.56□□□□□ -1.84
CBWD1-212ENST00000475411 APCP25054 2843 aa3.56□□□□□ -1.84
CBWD1-212ENST00000475411 MYO15AQ9UKN7 3530 aa3.56□□□□□ -1.84
CBWD1-212ENST00000475411 SPRR4Q96PI1 79 aa3.56□□□□□ -1.84
CBWD1-212ENST00000475411 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.56□□□□□ -1.84
CBWD1-212ENST00000475411 ST20-AS1Q8NBB2 130 aa3.55□□□□□ -1.84
CBWD1-212ENST00000475411 TRIOO75962 3097 aa3.55□□□□□ -1.84
CBWD1-212ENST00000475411 IGLV8-61A0A075B6I0 122 aa3.55□□□□□ -1.84
CBWD1-212ENST00000475411 KRTAP10-1P60331 282 aa3.55□□□□□ -1.84
CBWD1-212ENST00000475411 PRAC1Q96KF2 57 aa3.55□□□□□ -1.84
CBWD1-212ENST00000475411 KRTAP1-5Q9BYS1 174 aa3.55□□□□□ -1.84
CBWD1-212ENST00000475411 TENM4Q6N022 2769 aa3.55□□□□□ -1.84
CBWD1-212ENST00000475411 A8MWP4 228 aa3.54□□□□□ -1.84
CBWD1-212ENST00000475411 NBEAL1Q6ZS30 2694 aa3.54□□□□□ -1.84
CBWD1-212ENST00000475411 WDFY4Q6ZS81 3184 aa3.54□□□□□ -1.84
CBWD1-212ENST00000475411 DNAH14Q0VDD8 3507 aa3.53□□□□□ -1.84
CBWD1-212ENST00000475411 KRTAP16-1A8MUX0 517 aa3.53□□□□□ -1.84
CBWD1-212ENST00000475411 LUZP6Q538Z0 58 aa3.53□□□□□ -1.84
CBWD1-212ENST00000475411 KRTAP10-2P60368 255 aa3.53□□□□□ -1.84
CBWD1-212ENST00000475411 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
CBWD1-212ENST00000475411 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.84
CBWD1-212ENST00000475411 CYSTM1Q9H1C7 97 aa3.53□□□□□ -1.84
CBWD1-212ENST00000475411 DMAC1Q96GE9 116 aa3.52□□□□□ -1.85
CBWD1-212ENST00000475411 ASH1LQ9NR48 2969 aaKnown RBP3.52□□□□□ -1.85
CBWD1-212ENST00000475411 Q8N9P0 234 aaPredicted RBP3.52□□□□□ -1.85
CBWD1-212ENST00000475411 Q5VV11 94 aa3.52□□□□□ -1.85
CBWD1-212ENST00000475411 K7EQZ3 153 aa3.52□□□□□ -1.85
CBWD1-212ENST00000475411 CFAP54Q96N23 3096 aa3.51□□□□□ -1.85
CBWD1-212ENST00000475411 Q8N1X5 172 aa3.51□□□□□ -1.85
CBWD1-212ENST00000475411 OCR1Q9BZK8 76 aa3.51□□□□□ -1.85
CBWD1-212ENST00000475411 PRR26Q8N8Z3 221 aa3.51□□□□□ -1.85
CBWD1-212ENST00000475411 Q96NJ1 140 aa3.51□□□□□ -1.85
CBWD1-212ENST00000475411 OBSCN-AS1Q96MR7 158 aa3.51□□□□□ -1.85
CBWD1-212ENST00000475411 MUC3AQ02505 3323 aa3.51□□□□□ -1.85
CBWD1-212ENST00000475411 UTP20O75691 2785 aaKnown RBP3.51□□□□□ -1.85
CBWD1-212ENST00000475411 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
CBWD1-212ENST00000475411 ITPR1Q14643 2758 aa3.5□□□□□ -1.85
CBWD1-212ENST00000475411 IGKV2D-30A0A075B6S6 120 aa3.5□□□□□ -1.85
CBWD1-212ENST00000475411 IGKV2-30P06310 120 aa3.5□□□□□ -1.85
CBWD1-212ENST00000475411 SEC61BP60468 96 aaKnown RBP3.5□□□□□ -1.85
CBWD1-212ENST00000475411 CSAG1Q6PB30 78 aa3.5□□□□□ -1.85
CBWD1-212ENST00000475411 MAP1AP78559 2803 aaPredicted RBP3.5□□□□□ -1.85
CBWD1-212ENST00000475411 FRYLO94915 3013 aa3.49□□□□□ -1.85
CBWD1-212ENST00000475411 Q6ZRN7 208 aaPredicted RBP3.47□□□□□ -1.85
CBWD1-212ENST00000475411 Q6ZSA8 131 aa3.47□□□□□ -1.85
CBWD1-212ENST00000475411 KRTAP26-1Q6PEX3 210 aa3.46□□□□□ -1.86
CBWD1-212ENST00000475411 DMXL2Q8TDJ6 3036 aa3.46□□□□□ -1.86
CBWD1-212ENST00000475411 MRPL34Q9BQ48 92 aaKnown RBP3.46□□□□□ -1.86
CBWD1-212ENST00000475411 LAMA5O15230 3695 aa3.45□□□□□ -1.86
CBWD1-212ENST00000475411 IGFL1Q6UW32 110 aa3.45□□□□□ -1.86
CBWD1-212ENST00000475411 FRYQ5TBA9 3013 aa3.45□□□□□ -1.86
CBWD1-212ENST00000475411 VPS13AQ96RL7 3174 aa3.45□□□□□ -1.86
CBWD1-212ENST00000475411 C9orf92A6NGG3 77 aa3.45□□□□□ -1.86
CBWD1-212ENST00000475411 ANAPC11Q9NYG5 84 aa3.45□□□□□ -1.86
CBWD1-212ENST00000475411 RELNP78509 3460 aa3.43□□□□□ -1.86
CBWD1-212ENST00000475411 Q8N377 158 aa3.43□□□□□ -1.86
CBWD1-212ENST00000475411 COL12A1Q99715 3063 aa3.43□□□□□ -1.86
CBWD1-212ENST00000475411 A0A1B0GVX0 72 aa3.42□□□□□ -1.86
CBWD1-212ENST00000475411 A6NN06 94 aa3.42□□□□□ -1.86
CBWD1-212ENST00000475411 DMXL1Q9Y485 3027 aa3.42□□□□□ -1.86
CBWD1-212ENST00000475411 NBEAQ8NFP9 2946 aa3.42□□□□□ -1.86
CBWD1-212ENST00000475411 SPRR1AP35321 89 aa3.42□□□□□ -1.86
CBWD1-212ENST00000475411 FAM104AQ969W3 186 aa3.42□□□□□ -1.86
CBWD1-212ENST00000475411 SPINK7P58062 85 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 LAMA1P25391 3075 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 STAB2Q8WWQ8 2551 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 IGLV5-48A0A075B6I7 105 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 ATMQ13315 3056 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 KALRNO60229 2985 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 SPRR1BP22528 89 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 DSCR10P59022 87 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 C8orf17Q9NRJ1 99 aa3.41□□□□□ -1.86
CBWD1-212ENST00000475411 M0R2T5 61 aa3.4□□□□□ -1.86
CBWD1-212ENST00000475411 LCE2BO14633 110 aa3.39□□□□□ -1.87
CBWD1-212ENST00000475411 NIPBLQ6KC79 2804 aaeCLIP3.39□□□□□ -1.87
CBWD1-212ENST00000475411 CSMD3Q7Z407 3707 aa3.39□□□□□ -1.87
CBWD1-212ENST00000475411 RPS29P62273 56 aaKnown RBP3.38□□□□□ -1.87
CBWD1-212ENST00000475411 CUBNO60494 3623 aa3.37□□□□□ -1.87
CBWD1-212ENST00000475411 A0A1W2PNM2 257 aa3.36□□□□□ -1.87
CBWD1-212ENST00000475411 LINC00483Q53H64 154 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms