RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 Q6ZQY7 126 aa9.72□□□□□ -0.85
SCAF11-206ENST00000474828 PPDPFLQ8WWR9 84 aa9.72□□□□□ -0.85
SCAF11-206ENST00000474828 A0A1B0GX51 115 aa9.71□□□□□ -0.86
SCAF11-206ENST00000474828 K7ERJ3 54 aa9.71□□□□□ -0.86
SCAF11-206ENST00000474828 TSPAN13O95857 204 aa9.71□□□□□ -0.86
SCAF11-206ENST00000474828 DEFB105AQ8NG35 78 aa9.71□□□□□ -0.86
SCAF11-206ENST00000474828 FAM218AQ96MZ4 157 aa9.71□□□□□ -0.86
SCAF11-206ENST00000474828 TRIAP1O43715 76 aa9.7□□□□□ -0.86
SCAF11-206ENST00000474828 TSTD3H0UI37 97 aa9.68□□□□□ -0.86
SCAF11-206ENST00000474828 Q1RN00 199 aa9.68□□□□□ -0.86
SCAF11-206ENST00000474828 IGLV8-61A0A075B6I0 122 aa9.67□□□□□ -0.86
SCAF11-206ENST00000474828 M0R143 59 aa9.67□□□□□ -0.86
SCAF11-206ENST00000474828 OCIAD2Q56VL3 154 aa9.67□□□□□ -0.86
SCAF11-206ENST00000474828 C9orf153Q5TBE3 101 aa9.67□□□□□ -0.86
SCAF11-206ENST00000474828 CD164Q04900 197 aa9.66□□□□□ -0.86
SCAF11-206ENST00000474828 LPAP08519 4548 aa9.65□□□□□ -0.86
SCAF11-206ENST00000474828 SNCGO76070 127 aa9.64□□□□□ -0.87
SCAF11-206ENST00000474828 COX6CP09669 75 aa9.61□□□□□ -0.87
SCAF11-206ENST00000474828 Q5XG85 94 aa9.6□□□□□ -0.87
SCAF11-206ENST00000474828 FP248Q71RG6 208 aaPredicted RBP9.6□□□□□ -0.87
SCAF11-206ENST00000474828 PSMB2P49721 201 aa9.59□□□□□ -0.87
SCAF11-206ENST00000474828 PRR4Q16378 134 aa9.59□□□□□ -0.87
SCAF11-206ENST00000474828 CLEC2BQ92478 149 aa9.59□□□□□ -0.87
SCAF11-206ENST00000474828 GHRHP01286 108 aa9.58□□□□□ -0.88
SCAF11-206ENST00000474828 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
SCAF11-206ENST00000474828 Q6JHZ5 121 aa9.57□□□□□ -0.88
SCAF11-206ENST00000474828 F8WEM9 126 aa9.56□□□□□ -0.88
SCAF11-206ENST00000474828 TRACP01848 142 aa9.56□□□□□ -0.88
SCAF11-206ENST00000474828 H3BQ85 93 aa9.55□□□□□ -0.88
SCAF11-206ENST00000474828 LST1O00453 97 aa9.55□□□□□ -0.88
SCAF11-206ENST00000474828 TPRXLQ17RH7 258 aa9.55□□□□□ -0.88
SCAF11-206ENST00000474828 LIMD2Q9BT23 127 aa9.54□□□□□ -0.88
SCAF11-206ENST00000474828 SNHG12Q9BXW3 62 aa9.54□□□□□ -0.88
SCAF11-206ENST00000474828 RNF213Q63HN8 5207 aa9.53□□□□□ -0.88
SCAF11-206ENST00000474828 NDUFV3P56181 108 aaKnown RBP9.53□□□□□ -0.88
SCAF11-206ENST00000474828 IGFL1Q6UW32 110 aa9.53□□□□□ -0.88
SCAF11-206ENST00000474828 IGLV7-46A0A075B6I9 117 aa9.52□□□□□ -0.89
SCAF11-206ENST00000474828 A0A0G2JQZ4 141 aa9.52□□□□□ -0.89
SCAF11-206ENST00000474828 DNAL4O96015 105 aa9.5□□□□□ -0.89
SCAF11-206ENST00000474828 ORMDL1Q9P0S3 153 aa9.5□□□□□ -0.89
SCAF11-206ENST00000474828 Q6Q795 121 aa9.49□□□□□ -0.89
SCAF11-206ENST00000474828 TMEM256-PLSCR3K7ERE1 68 aa9.48□□□□□ -0.89
SCAF11-206ENST00000474828 SCGB1C2P0DMR2 95 aa9.48□□□□□ -0.89
SCAF11-206ENST00000474828 HRCT1Q6UXD1 115 aa9.48□□□□□ -0.89
SCAF11-206ENST00000474828 ASB16-AS1Q495Z4 193 aa9.47□□□□□ -0.89
SCAF11-206ENST00000474828 H3BUT2 72 aa9.46□□□□□ -0.9
SCAF11-206ENST00000474828 UBE2V1Q13404 147 aa9.46□□□□□ -0.9
SCAF11-206ENST00000474828 KRTAP13-3Q3SY46 172 aa9.46□□□□□ -0.9
SCAF11-206ENST00000474828 TRBV7-7A0A0K0K1E9 115 aa9.45□□□□□ -0.9
SCAF11-206ENST00000474828 H3BMG7 143 aa9.45□□□□□ -0.9
SCAF11-206ENST00000474828 FABP2P12104 132 aa9.45□□□□□ -0.9
SCAF11-206ENST00000474828 TCL1BO95988 128 aa9.44□□□□□ -0.9
SCAF11-206ENST00000474828 TAX1BP3O14907 124 aa9.43□□□□□ -0.9
SCAF11-206ENST00000474828 BATFQ16520 125 aa9.43□□□□□ -0.9
SCAF11-206ENST00000474828 C1orf195Q5TG92 126 aa9.43□□□□□ -0.9
SCAF11-206ENST00000474828 NAA38Q9BRA0 125 aaKnown RBP9.43□□□□□ -0.9
SCAF11-206ENST00000474828 C9orf118A6NHY6 69 aa9.42□□□□□ -0.9
SCAF11-206ENST00000474828 ATXN8Q156A1 80 aa9.42□□□□□ -0.9
SCAF11-206ENST00000474828 TRBV20-1A0A075B6N2 111 aa9.41□□□□□ -0.9
SCAF11-206ENST00000474828 LYRM7Q5U5X0 104 aa9.41□□□□□ -0.9
SCAF11-206ENST00000474828 TEN1Q86WV5 123 aa9.41□□□□□ -0.9
SCAF11-206ENST00000474828 MUC17Q685J3 4493 aa9.39□□□□□ -0.91
SCAF11-206ENST00000474828 A0A1W2PNM2 257 aa9.37□□□□□ -0.91
SCAF11-206ENST00000474828 BAALC-AS2P0C853 105 aa9.37□□□□□ -0.91
SCAF11-206ENST00000474828 TRBV7-4A0A0J9YYF1 115 aa9.36□□□□□ -0.91
SCAF11-206ENST00000474828 A0A1W2PPM0 123 aa9.36□□□□□ -0.91
SCAF11-206ENST00000474828 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
SCAF11-206ENST00000474828 ANKRD29Q8N6D5 301 aa9.35□□□□□ -0.91
SCAF11-206ENST00000474828 SS18L2Q9UHA2 77 aa9.32□□□□□ -0.92
SCAF11-206ENST00000474828 RBM3P98179 157 aaKnown RBP9.31□□□□□ -0.92
SCAF11-206ENST00000474828 COL5A1-AS1Q5SY13 56 aa9.31□□□□□ -0.92
SCAF11-206ENST00000474828 XP32Q5T750 250 aa9.31□□□□□ -0.92
SCAF11-206ENST00000474828 OBSCN-AS1Q96MR7 158 aa9.29□□□□□ -0.92
SCAF11-206ENST00000474828 A0A087WSZ3 146 aa9.28□□□□□ -0.92
SCAF11-206ENST00000474828 JMJD7-PLA2G4BH0Y9G9 81 aa9.28□□□□□ -0.92
SCAF11-206ENST00000474828 Q96NJ1 140 aa9.28□□□□□ -0.92
SCAF11-206ENST00000474828 MUC2Q02817 5179 aa9.27□□□□□ -0.92
SCAF11-206ENST00000474828 C9JAW5 83 aa9.27□□□□□ -0.93
SCAF11-206ENST00000474828 CCKP06307 115 aa9.26□□□□□ -0.93
SCAF11-206ENST00000474828 H3BT86 120 aa9.25□□□□□ -0.93
SCAF11-206ENST00000474828 DSCR8Q96T75 97 aa9.25□□□□□ -0.93
SCAF11-206ENST00000474828 LOC110117498A0A087WWA1 95 aa9.24□□□□□ -0.93
SCAF11-206ENST00000474828 A0A1B0GV72 72 aa9.24□□□□□ -0.93
SCAF11-206ENST00000474828 A0A1B0GW54 56 aa9.23□□□□□ -0.93
SCAF11-206ENST00000474828 PDE6GP18545 87 aa9.22□□□□□ -0.93
SCAF11-206ENST00000474828 Q6ZQT0 140 aa9.22□□□□□ -0.93
SCAF11-206ENST00000474828 LOC100996750A0A140TA64 210 aa9.21□□□□□ -0.94
SCAF11-206ENST00000474828 C21orf62-AS1Q17RA5 79 aa9.21□□□□□ -0.94
SCAF11-206ENST00000474828 KRTAP4-6Q9BYQ5 205 aa9.21□□□□□ -0.94
SCAF11-206ENST00000474828 LINC00472Q9H8W2 130 aa9.21□□□□□ -0.94
SCAF11-206ENST00000474828 SPCS1Q9Y6A9 102 aa9.21□□□□□ -0.94
SCAF11-206ENST00000474828 PCP4L1A6NKN8 68 aa9.19□□□□□ -0.94
SCAF11-206ENST00000474828 C9orf92A6NGG3 77 aa9.18□□□□□ -0.94
SCAF11-206ENST00000474828 SEC61BP60468 96 aaKnown RBP9.17□□□□□ -0.94
SCAF11-206ENST00000474828 A0A0U1RQV1 116 aa9.15□□□□□ -0.94
SCAF11-206ENST00000474828 K7EP34 96 aa9.15□□□□□ -0.94
SCAF11-206ENST00000474828 PRO0461Q9UI25 63 aa9.15□□□□□ -0.94
SCAF11-206ENST00000474828 C14orf132Q9NPU4 83 aa9.14□□□□□ -0.95
SCAF11-206ENST00000474828 MTURNQ8N3F0 131 aa9.13□□□□□ -0.95
SCAF11-206ENST00000474828 VPS25Q9BRG1 176 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms