RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 IGFL1Q6UW32 110 aa3.91□□□□□ -1.78
HERC4-209ENST00000473533 B9D2Q9BPU9 175 aa3.91□□□□□ -1.78
HERC4-209ENST00000473533 LIMD2Q9BT23 127 aa3.9□□□□□ -1.78
HERC4-209ENST00000473533 LINC00588Q9Y4M8 146 aa3.9□□□□□ -1.78
HERC4-209ENST00000473533 FAM168BA1KXE4 195 aa3.89□□□□□ -1.79
HERC4-209ENST00000473533 SPRR1BP22528 89 aa3.89□□□□□ -1.79
HERC4-209ENST00000473533 CNBPP62633 177 aaKnown RBP3.89□□□□□ -1.79
HERC4-209ENST00000473533 CASC2Q6XLA1 102 aa3.89□□□□□ -1.79
HERC4-209ENST00000473533 A0A087WSZ3 146 aa3.89□□□□□ -1.79
HERC4-209ENST00000473533 A8MWP4 228 aa3.89□□□□□ -1.79
HERC4-209ENST00000473533 H0Y9P7 68 aa3.88□□□□□ -1.79
HERC4-209ENST00000473533 KRTAP10-11P60412 298 aa3.88□□□□□ -1.79
HERC4-209ENST00000473533 OXLD1Q5BKU9 147 aa3.88□□□□□ -1.79
HERC4-209ENST00000473533 WFDC13Q8IUB5 93 aa3.88□□□□□ -1.79
HERC4-209ENST00000473533 LINC00208Q96KT6 92 aa3.88□□□□□ -1.79
HERC4-209ENST00000473533 TP53AIP1Q9HCN2 124 aa3.88□□□□□ -1.79
HERC4-209ENST00000473533 RPL37AP61513 92 aaKnown RBP3.87□□□□□ -1.79
HERC4-209ENST00000473533 TENM2Q9NT68 2774 aa3.87□□□□□ -1.79
HERC4-209ENST00000473533 KRTAP29-1A8MX34 341 aaPredicted RBP3.87□□□□□ -1.79
HERC4-209ENST00000473533 KRTAP7-1Q8IUC3 87 aa3.86□□□□□ -1.79
HERC4-209ENST00000473533 MOBPQ13875 183 aa3.85□□□□□ -1.79
HERC4-209ENST00000473533 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
HERC4-209ENST00000473533 PRLHP81277 87 aa3.84□□□□□ -1.79
HERC4-209ENST00000473533 A0A096LNI7 61 aa3.84□□□□□ -1.79
HERC4-209ENST00000473533 UBE2DNLQ8IWF7 75 aa3.84□□□□□ -1.8
HERC4-209ENST00000473533 LINC00472Q9H8W2 130 aa3.84□□□□□ -1.8
HERC4-209ENST00000473533 ZNF706Q9Y5V0 76 aaPredicted RBP3.84□□□□□ -1.8
HERC4-209ENST00000473533 ANK3Q12955 4377 aaKnown RBP3.84□□□□□ -1.8
HERC4-209ENST00000473533 IGKV2-24A0A0C4DH68 120 aa3.83□□□□□ -1.8
HERC4-209ENST00000473533 CASC10Q5T4H9 136 aa3.83□□□□□ -1.8
HERC4-209ENST00000473533 COL7A1Q02388 2944 aa3.83□□□□□ -1.8
HERC4-209ENST00000473533 TENM3Q9P273 2699 aa3.83□□□□□ -1.8
HERC4-209ENST00000473533 PSPHP1O15172 72 aa3.83□□□□□ -1.8
HERC4-209ENST00000473533 SRRM2Q9UQ35 2752 aaKnown RBP3.83□□□□□ -1.8
HERC4-209ENST00000473533 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
HERC4-209ENST00000473533 CDK2AP2O75956 126 aa3.83□□□□□ -1.8
HERC4-209ENST00000473533 IGLV7-46A0A075B6I9 117 aa3.82□□□□□ -1.8
HERC4-209ENST00000473533 PRR4Q16378 134 aa3.82□□□□□ -1.8
HERC4-209ENST00000473533 C9orf163Q8N9P6 203 aa3.82□□□□□ -1.8
HERC4-209ENST00000473533 A0A1W2PNN7 141 aa3.81□□□□□ -1.8
HERC4-209ENST00000473533 DEFB116Q30KQ4 102 aa3.81□□□□□ -1.8
HERC4-209ENST00000473533 A8MUN3 132 aa3.81□□□□□ -1.8
HERC4-209ENST00000473533 CHKB-CPT1BH3BT56 60 aa3.81□□□□□ -1.8
HERC4-209ENST00000473533 SEC61GP60059 68 aa3.81□□□□□ -1.8
HERC4-209ENST00000473533 Q75L30 129 aa3.81□□□□□ -1.8
HERC4-209ENST00000473533 Q8N9P0 234 aaPredicted RBP3.81□□□□□ -1.8
HERC4-209ENST00000473533 PRR15LQ9BU68 103 aa3.8□□□□□ -1.8
HERC4-209ENST00000473533 MMP24-AS1A0A0U1RRL7 71 aa3.8□□□□□ -1.8
HERC4-209ENST00000473533 LOC101927531A0A1B0GV80 90 aa3.8□□□□□ -1.8
HERC4-209ENST00000473533 Q5VV11 94 aa3.79□□□□□ -1.8
HERC4-209ENST00000473533 ATP11AUNQ6ZP68 121 aa3.79□□□□□ -1.8
HERC4-209ENST00000473533 COA5Q86WW8 74 aa3.79□□□□□ -1.8
HERC4-209ENST00000473533 NDUFS5O43920 106 aa3.79□□□□□ -1.8
HERC4-209ENST00000473533 PHF5AQ7RTV0 110 aaKnown RBP3.79□□□□□ -1.8
HERC4-209ENST00000473533 KRTAP24-1Q3LI83 254 aa3.78□□□□□ -1.8
HERC4-209ENST00000473533 Q6ZR54 194 aa3.78□□□□□ -1.8
HERC4-209ENST00000473533 C8orf17Q9NRJ1 99 aa3.78□□□□□ -1.8
HERC4-209ENST00000473533 STAB2Q8WWQ8 2551 aa3.77□□□□□ -1.81
HERC4-209ENST00000473533 FBN3Q75N90 2809 aa3.77□□□□□ -1.81
HERC4-209ENST00000473533 A6NED7 52 aa3.77□□□□□ -1.81
HERC4-209ENST00000473533 ASB16-AS1Q495Z4 193 aa3.77□□□□□ -1.81
HERC4-209ENST00000473533 A0A0G2JQZ4 141 aa3.77□□□□□ -1.81
HERC4-209ENST00000473533 CD164Q04900 197 aa3.77□□□□□ -1.81
HERC4-209ENST00000473533 LINC01558Q9Y6Z2 57 aa3.77□□□□□ -1.81
HERC4-209ENST00000473533 A0A1B0GVX0 72 aa3.76□□□□□ -1.81
HERC4-209ENST00000473533 LINC00483Q53H64 154 aa3.76□□□□□ -1.81
HERC4-209ENST00000473533 KRTAP13-1Q8IUC0 172 aa3.76□□□□□ -1.81
HERC4-209ENST00000473533 MRPL34Q9BQ48 92 aaKnown RBP3.76□□□□□ -1.81
HERC4-209ENST00000473533 CDC42SE1Q9NRR8 79 aa3.76□□□□□ -1.81
HERC4-209ENST00000473533 KTN1-AS1Q86SY8 53 aa3.75□□□□□ -1.81
HERC4-209ENST00000473533 APLNQ9ULZ1 77 aa3.75□□□□□ -1.81
HERC4-209ENST00000473533 K7EIL1 84 aa3.74□□□□□ -1.81
HERC4-209ENST00000473533 NUPR2A6NF83 97 aa3.74□□□□□ -1.81
HERC4-209ENST00000473533 CHTF8P0CG12 524 aa3.73□□□□□ -1.81
HERC4-209ENST00000473533 IGLV9-49A0A0B4J1Y8 123 aa3.73□□□□□ -1.81
HERC4-209ENST00000473533 NBDYA0A0U1RRE5 68 aa3.73□□□□□ -1.81
HERC4-209ENST00000473533 C8orf87E5RJ46 101 aa3.73□□□□□ -1.81
HERC4-209ENST00000473533 KRTAP21-3Q3LHN1 58 aa3.73□□□□□ -1.81
HERC4-209ENST00000473533 PCOTHQ58A44 107 aa3.73□□□□□ -1.81
HERC4-209ENST00000473533 KRTAP1-5Q9BYS1 174 aa3.73□□□□□ -1.81
HERC4-209ENST00000473533 IGHV6-1A0A0B4J1U7 121 aa3.72□□□□□ -1.81
HERC4-209ENST00000473533 Q96NJ1 140 aa3.72□□□□□ -1.81
HERC4-209ENST00000473533 SPTSSBQ8NFR3 76 aa3.72□□□□□ -1.81
HERC4-209ENST00000473533 SPACA4Q8TDM5 124 aa3.72□□□□□ -1.81
HERC4-209ENST00000473533 ACYP2P14621 99 aa3.71□□□□□ -1.82
HERC4-209ENST00000473533 MDFIQ99750 246 aa3.71□□□□□ -1.82
HERC4-209ENST00000473533 PLAC8Q9NZF1 115 aa3.71□□□□□ -1.82
HERC4-209ENST00000473533 KRTAP11-1Q8IUC1 163 aa3.7□□□□□ -1.82
HERC4-209ENST00000473533 ZNF861PO60384 105 aa3.69□□□□□ -1.82
HERC4-209ENST00000473533 IGLV5-52A0A0A0MRZ9 124 aa3.69□□□□□ -1.82
HERC4-209ENST00000473533 SPAG11AQ6PDA7 123 aa3.69□□□□□ -1.82
HERC4-209ENST00000473533 WWC2-AS2Q96NR7 200 aa3.69□□□□□ -1.82
HERC4-209ENST00000473533 HRES1P13985 223 aa3.68□□□□□ -1.82
HERC4-209ENST00000473533 C7orf65Q6ZTY9 151 aa3.68□□□□□ -1.82
HERC4-209ENST00000473533 LCA10Q71F78 164 aa3.68□□□□□ -1.82
HERC4-209ENST00000473533 SSBP3-AS1Q7Z2R9 100 aa3.68□□□□□ -1.82
HERC4-209ENST00000473533 A6NN06 94 aa3.67□□□□□ -1.82
HERC4-209ENST00000473533 FAM229AH3BQW9 127 aa3.67□□□□□ -1.82
HERC4-209ENST00000473533 Q6ZRN7 208 aaPredicted RBP3.67□□□□□ -1.82
HERC4-209ENST00000473533 A0A087WTM6 91 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms