RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 PRO1854Q9UHT4 67 aa8.23□□□□□ -1.09
BRCA1-211ENST00000472490 IGLV5-48A0A075B6I7 105 aa8.22□□□□□ -1.09
BRCA1-211ENST00000472490 SMIM6P0DI80 62 aa8.22□□□□□ -1.09
BRCA1-211ENST00000472490 PRR4Q16378 134 aa8.22□□□□□ -1.09
BRCA1-211ENST00000472490 Q1RN00 199 aa8.22□□□□□ -1.09
BRCA1-211ENST00000472490 FXYD2P54710 66 aa8.21□□□□□ -1.1
BRCA1-211ENST00000472490 H0YGX0 51 aa8.2□□□□□ -1.1
BRCA1-211ENST00000472490 RPS29P62273 56 aaKnown RBP8.19□□□□□ -1.1
BRCA1-211ENST00000472490 KRTAP19-1Q8IUB9 90 aa8.18□□□□□ -1.1
BRCA1-211ENST00000472490 HMCN2Q8NDA2 5059 aa8.18□□□□□ -1.1
BRCA1-211ENST00000472490 LINC01547P58512 204 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-211ENST00000472490 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.17□□□□□ -1.1
BRCA1-211ENST00000472490 Q6ZQY7 126 aa8.17□□□□□ -1.1
BRCA1-211ENST00000472490 Q8N377 158 aa8.16□□□□□ -1.1
BRCA1-211ENST00000472490 PPDPFLQ8WWR9 84 aa8.16□□□□□ -1.1
BRCA1-211ENST00000472490 PRO1933Q9H354 126 aa8.16□□□□□ -1.1
BRCA1-211ENST00000472490 F8WEM9 126 aa8.15□□□□□ -1.1
BRCA1-211ENST00000472490 OCIAD2Q56VL3 154 aa8.14□□□□□ -1.11
BRCA1-211ENST00000472490 SMIM29Q86T20 159 aa8.14□□□□□ -1.11
BRCA1-211ENST00000472490 A0A1B0GX51 115 aa8.13□□□□□ -1.11
BRCA1-211ENST00000472490 COX6CP09669 75 aa8.13□□□□□ -1.11
BRCA1-211ENST00000472490 RETNLBQ9BQ08 111 aa8.13□□□□□ -1.11
BRCA1-211ENST00000472490 PSMB2P49721 201 aa8.12□□□□□ -1.11
BRCA1-211ENST00000472490 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
BRCA1-211ENST00000472490 TSTD3H0UI37 97 aa8.11□□□□□ -1.11
BRCA1-211ENST00000472490 M0R143 59 aa8.11□□□□□ -1.11
BRCA1-211ENST00000472490 CD164Q04900 197 aa8.11□□□□□ -1.11
BRCA1-211ENST00000472490 LIMD2Q9BT23 127 aa8.11□□□□□ -1.11
BRCA1-211ENST00000472490 SNHG12Q9BXW3 62 aa8.11□□□□□ -1.11
BRCA1-211ENST00000472490 IGLV7-46A0A075B6I9 117 aa8.1□□□□□ -1.11
BRCA1-211ENST00000472490 LOC105371267A0A1B0GV96 52 aa8.1□□□□□ -1.11
BRCA1-211ENST00000472490 K7ERJ3 54 aa8.1□□□□□ -1.11
BRCA1-211ENST00000472490 TRIAP1O43715 76 aa8.1□□□□□ -1.11
BRCA1-211ENST00000472490 KRTAP9-9Q9BYP9 154 aa8.1□□□□□ -1.11
BRCA1-211ENST00000472490 KRTAP9-4Q9BYQ2 154 aa8.1□□□□□ -1.11
BRCA1-211ENST00000472490 Q6JHZ5 121 aa8.08□□□□□ -1.12
BRCA1-211ENST00000472490 FAM218AQ96MZ4 157 aa8.08□□□□□ -1.12
BRCA1-211ENST00000472490 DNAL4O96015 105 aa8.07□□□□□ -1.12
BRCA1-211ENST00000472490 HRCT1Q6UXD1 115 aa8.07□□□□□ -1.12
BRCA1-211ENST00000472490 TPRXLQ17RH7 258 aa8.06□□□□□ -1.12
BRCA1-211ENST00000472490 IGLV8-61A0A075B6I0 122 aa8.05□□□□□ -1.12
BRCA1-211ENST00000472490 H3BQ85 93 aa8.05□□□□□ -1.12
BRCA1-211ENST00000472490 SCGB1C2P0DMR2 95 aa8.04□□□□□ -1.12
BRCA1-211ENST00000472490 CLEC2BQ92478 149 aa8.03□□□□□ -1.12
BRCA1-211ENST00000472490 CDIP1Q9H305 208 aa8.03□□□□□ -1.12
BRCA1-211ENST00000472490 Q5XG85 94 aa8.02□□□□□ -1.13
BRCA1-211ENST00000472490 FABP2P12104 132 aa8.01□□□□□ -1.13
BRCA1-211ENST00000472490 NDUFV3P56181 108 aaKnown RBP8.01□□□□□ -1.13
BRCA1-211ENST00000472490 ORMDL1Q9P0S3 153 aa8.01□□□□□ -1.13
BRCA1-211ENST00000472490 KRTAP4-8A0A0G2JLE6 195 aa8□□□□□ -1.13
BRCA1-211ENST00000472490 TCL1BO95988 128 aa8□□□□□ -1.13
BRCA1-211ENST00000472490 TMEM256-PLSCR3K7ERE1 68 aa7.99□□□□□ -1.13
BRCA1-211ENST00000472490 IGFL1Q6UW32 110 aa7.99□□□□□ -1.13
BRCA1-211ENST00000472490 A0A0G2JQZ4 141 aa7.98□□□□□ -1.13
BRCA1-211ENST00000472490 TRACP01848 142 aa7.98□□□□□ -1.13
BRCA1-211ENST00000472490 LRP2P98164 4655 aa7.98□□□□□ -1.13
BRCA1-211ENST00000472490 H3BMG7 143 aa7.97□□□□□ -1.13
BRCA1-211ENST00000472490 H3BUT2 72 aa7.96□□□□□ -1.14
BRCA1-211ENST00000472490 LST1O00453 97 aa7.96□□□□□ -1.14
BRCA1-211ENST00000472490 UBR4Q5T4S7 5183 aa7.96□□□□□ -1.14
BRCA1-211ENST00000472490 TRBV7-7A0A0K0K1E9 115 aa7.95□□□□□ -1.14
BRCA1-211ENST00000472490 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
BRCA1-211ENST00000472490 LYRM7Q5U5X0 104 aa7.95□□□□□ -1.14
BRCA1-211ENST00000472490 LPAP08519 4548 aa7.94□□□□□ -1.14
BRCA1-211ENST00000472490 BATFQ16520 125 aa7.94□□□□□ -1.14
BRCA1-211ENST00000472490 UBE2V1Q13404 147 aa7.93□□□□□ -1.14
BRCA1-211ENST00000472490 TEN1Q86WV5 123 aa7.93□□□□□ -1.14
BRCA1-211ENST00000472490 ATXN8Q156A1 80 aa7.92□□□□□ -1.14
BRCA1-211ENST00000472490 ASB16-AS1Q495Z4 193 aa7.92□□□□□ -1.14
BRCA1-211ENST00000472490 Q6Q795 121 aa7.92□□□□□ -1.14
BRCA1-211ENST00000472490 C1orf195Q5TG92 126 aa7.91□□□□□ -1.14
BRCA1-211ENST00000472490 C21orf62-AS1Q17RA5 79 aa7.9□□□□□ -1.14
BRCA1-211ENST00000472490 SS18L2Q9UHA2 77 aa7.9□□□□□ -1.14
BRCA1-211ENST00000472490 ANKRD29Q8N6D5 301 aa7.89□□□□□ -1.15
BRCA1-211ENST00000472490 TRBV20-1A0A075B6N2 111 aa7.88□□□□□ -1.15
BRCA1-211ENST00000472490 NAA38Q9BRA0 125 aaKnown RBP7.88□□□□□ -1.15
BRCA1-211ENST00000472490 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
BRCA1-211ENST00000472490 RBM3P98179 157 aaKnown RBP7.85□□□□□ -1.15
BRCA1-211ENST00000472490 A0A087WSZ3 146 aa7.84□□□□□ -1.15
BRCA1-211ENST00000472490 TRBV7-4A0A0J9YYF1 115 aa7.84□□□□□ -1.15
BRCA1-211ENST00000472490 A0A1B0GV72 72 aa7.84□□□□□ -1.15
BRCA1-211ENST00000472490 C9orf118A6NHY6 69 aa7.84□□□□□ -1.15
BRCA1-211ENST00000472490 DSCR8Q96T75 97 aa7.84□□□□□ -1.15
BRCA1-211ENST00000472490 SEC61BP60468 96 aaKnown RBP7.83□□□□□ -1.16
BRCA1-211ENST00000472490 A0A1W2PNM2 257 aa7.81□□□□□ -1.16
BRCA1-211ENST00000472490 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
BRCA1-211ENST00000472490 JMJD7-PLA2G4BH0Y9G9 81 aa7.81□□□□□ -1.16
BRCA1-211ENST00000472490 CCKP06307 115 aa7.81□□□□□ -1.16
BRCA1-211ENST00000472490 TAX1BP3O14907 124 aa7.8□□□□□ -1.16
BRCA1-211ENST00000472490 LCE1DQ5T752 114 aa7.8□□□□□ -1.16
BRCA1-211ENST00000472490 A0A1W2PPM0 123 aa7.79□□□□□ -1.16
BRCA1-211ENST00000472490 C9JAW5 83 aa7.79□□□□□ -1.16
BRCA1-211ENST00000472490 A0A0U1RQV1 116 aa7.77□□□□□ -1.17
BRCA1-211ENST00000472490 COL5A1-AS1Q5SY13 56 aa7.77□□□□□ -1.17
BRCA1-211ENST00000472490 PDE6GP18545 87 aa7.76□□□□□ -1.17
BRCA1-211ENST00000472490 VPS25Q9BRG1 176 aa7.76□□□□□ -1.17
BRCA1-211ENST00000472490 KRTAP4-7Q9BYR0 210 aa7.74□□□□□ -1.17
BRCA1-211ENST00000472490 RNF213Q63HN8 5207 aa7.73□□□□□ -1.17
BRCA1-211ENST00000472490 A0A1B0GW54 56 aa7.72□□□□□ -1.17
BRCA1-211ENST00000472490 H3BT86 120 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms