RNA–Protein interactions for RNA: ENST00000470621.1

SSB-209, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-209ENST00000470621 RALGAPBQ86X10 1494 aa0.04□□□□□ -2.4
SSB-209ENST00000470621 DMBT1Q9UGM3 2413 aaPredicted RBP0.04□□□□□ -2.4
SSB-209ENST00000470621 DEFB131BA0A096LNP1 70 aa0.04□□□□□ -2.4
SSB-209ENST00000470621 ATXN8Q156A1 80 aa0.04□□□□□ -2.4
SSB-209ENST00000470621 LYSTQ99698 3801 aa0.04□□□□□ -2.4
SSB-209ENST00000470621 DEPDC5O75140 1603 aa0.04□□□□□ -2.4
SSB-209ENST00000470621 PDE4DIPQ5VU43 2346 aa0.04□□□□□ -2.4
SSB-209ENST00000470621 HFM1A2PYH4 1435 aa0.04□□□□□ -2.4
SSB-209ENST00000470621 CCDC180Q9P1Z9 1646 aa0.03□□□□□ -2.4
SSB-209ENST00000470621 TRANK1O15050 2925 aa0.03□□□□□ -2.4
SSB-209ENST00000470621 LYNX1G3V0Z9 82 aa0.03□□□□□ -2.4
SSB-209ENST00000470621 C3orf79P0CE67 100 aa0.03□□□□□ -2.4
SSB-209ENST00000470621 C3P01024 1663 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 AKAP13Q12802 2813 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 MACF1Q9UPN3 7388 aaKnown RBP0.02□□□□□ -2.41
SSB-209ENST00000470621 ACANP16112 2415 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 PKD1P98161 4303 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 DEFB130BP0DP73 79 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 DEFB130AP0DP74 79 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 SPRR2BP35325 72 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 DEFB135Q30KP9 77 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 DSPP15924 2871 aaKnown RBP0.02□□□□□ -2.41
SSB-209ENST00000470621 COL7A1Q02388 2944 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 ABCC6O95255 1503 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 APC2O95996 2303 aa0.02□□□□□ -2.41
SSB-209ENST00000470621 SYNE2Q8WXH0 6885 aaKnown RBP0.01□□□□□ -2.41
SSB-209ENST00000470621 SETXQ7Z333 2677 aaKnown RBP0.01□□□□□ -2.41
SSB-209ENST00000470621 SMIM31A0A1B0GVY4 71 aa0.01□□□□□ -2.41
SSB-209ENST00000470621 LINC01549A6NIU2 74 aa0.01□□□□□ -2.41
SSB-209ENST00000470621 UBL5Q9BZL1 73 aa0.01□□□□□ -2.41
SSB-209ENST00000470621 GNG13Q9P2W3 67 aa0.01□□□□□ -2.41
SSB-209ENST00000470621 SSPOA2VEC9 5147 aa0.01□□□□□ -2.41
SSB-209ENST00000470621 NSD1Q96L73 2696 aaPredicted RBP0.01□□□□□ -2.41
SSB-209ENST00000470621 PKHD1P08F94 4074 aa0.01□□□□□ -2.41
SSB-209ENST00000470621 TNRC18O15417 2968 aaPredicted RBP0.01□□□□□ -2.41
SSB-209ENST00000470621 BPTFQ12830 3046 aa0.01□□□□□ -2.41
SSB-209ENST00000470621 ITSN2Q9NZM3 1697 aa0.01□□□□□ -2.41
SSB-209ENST00000470621 A0A087WWC5 75 aa0□□□□□ -2.41
SSB-209ENST00000470621 ETDCA0A1B0GVM5 59 aa0□□□□□ -2.41
SSB-209ENST00000470621 NBASA2RRP1 2371 aa0□□□□□ -2.41
SSB-209ENST00000470621 IAPPP10997 89 aa0□□□□□ -2.41
SSB-209ENST00000470621 PCNX1Q96RV3 2341 aa0□□□□□ -2.41
SSB-209ENST00000470621 FSIP2Q5CZC0 6907 aa-0.01□□□□□ -2.41
SSB-209ENST00000470621 COL6A3P12111 3177 aa-0.01□□□□□ -2.41
SSB-209ENST00000470621 ERICH3Q5RHP9 1530 aa-0.01□□□□□ -2.41
SSB-209ENST00000470621 DCHS2Q6V1P9 2916 aa-0.01□□□□□ -2.41
SSB-209ENST00000470621 KRTAP6-2Q3LI66 62 aa-0.01□□□□□ -2.41
SSB-209ENST00000470621 FLNCQ14315 2725 aa-0.01□□□□□ -2.41
SSB-209ENST00000470621 LY75O60449 1722 aa-0.01□□□□□ -2.41
SSB-209ENST00000470621 VPS13BQ7Z7G8 4022 aa-0.02□□□□□ -2.41
SSB-209ENST00000470621 KIAA0586Q9BVV6 1533 aa-0.02□□□□□ -2.41
SSB-209ENST00000470621 HECTD1Q9ULT8 2610 aa-0.02□□□□□ -2.41
SSB-209ENST00000470621 K7EMI3 77 aa-0.02□□□□□ -2.41
SSB-209ENST00000470621 DEFB114Q30KQ6 69 aa-0.02□□□□□ -2.41
SSB-209ENST00000470621 NCBP2-AS2Q69YL0 99 aa-0.02□□□□□ -2.41
SSB-209ENST00000470621 SVEP1Q4LDE5 3571 aa-0.02□□□□□ -2.41
SSB-209ENST00000470621 THOC2Q8NI27 1593 aaKnown RBP-0.02□□□□□ -2.41
SSB-209ENST00000470621 PRRC2CQ9Y520 2896 aaKnown RBP-0.03□□□□□ -2.41
SSB-209ENST00000470621 KMT2CQ8NEZ4 4911 aaKnown RBP-0.03□□□□□ -2.41
SSB-209ENST00000470621 DNAH9Q9NYC9 4486 aa-0.03□□□□□ -2.41
SSB-209ENST00000470621 MRPL33O75394 65 aaKnown RBP-0.03□□□□□ -2.41
SSB-209ENST00000470621 RPS27P42677 84 aaKnown RBP-0.03□□□□□ -2.41
SSB-209ENST00000470621 RPS27LQ71UM5 84 aaKnown RBP-0.03□□□□□ -2.41
SSB-209ENST00000470621 SPRR2GQ9BYE4 73 aa-0.03□□□□□ -2.41
SSB-209ENST00000470621 NEBP20929 6669 aa-0.03□□□□□ -2.41
SSB-209ENST00000470621 FLGP20930 4061 aaPredicted RBP-0.03□□□□□ -2.41
SSB-209ENST00000470621 FLNBO75369 2602 aaKnown RBP-0.03□□□□□ -2.41
SSB-209ENST00000470621 MUC2Q02817 5179 aa-0.04□□□□□ -2.42
SSB-209ENST00000470621 ALS2Q96Q42 1657 aa-0.04□□□□□ -2.42
SSB-209ENST00000470621 CUBNO60494 3623 aa-0.04□□□□□ -2.42
SSB-209ENST00000470621 SFTA3P0C7M3 94 aa-0.04□□□□□ -2.42
SSB-209ENST00000470621 TIAM1Q13009 1591 aa-0.04□□□□□ -2.42
SSB-209ENST00000470621 TENM2Q9NT68 2774 aa-0.04□□□□□ -2.42
SSB-209ENST00000470621 TOGARAM1Q9Y4F4 1720 aa-0.04□□□□□ -2.42
SSB-209ENST00000470621 APOBP04114 4563 aaKnown RBP-0.04□□□□□ -2.42
SSB-209ENST00000470621 FAT3Q8TDW7 4589 aa-0.04□□□□□ -2.42
SSB-209ENST00000470621 STAB1Q9NY15 2570 aa-0.05□□□□□ -2.42
SSB-209ENST00000470621 S4R3F8 94 aa-0.05□□□□□ -2.42
SSB-209ENST00000470621 SACSQ9NZJ4 4579 aa-0.05□□□□□ -2.42
SSB-209ENST00000470621 ANKRD36CQ5JPF3 1778 aa-0.05□□□□□ -2.42
SSB-209ENST00000470621 CROCC2H7BZ55 1655 aa-0.05□□□□□ -2.42
SSB-209ENST00000470621 KIF1AQ12756 1690 aa-0.05□□□□□ -2.42
SSB-209ENST00000470621 PKHD1L1Q86WI1 4243 aa-0.06□□□□□ -2.42
SSB-209ENST00000470621 M0R1W7 72 aa-0.06□□□□□ -2.42
SSB-209ENST00000470621 S100ZQ8WXG8 99 aa-0.06□□□□□ -2.42
SSB-209ENST00000470621 ANK3Q12955 4377 aaKnown RBP-0.06□□□□□ -2.42
SSB-209ENST00000470621 MUC12Q9UKN1 5478 aa-0.06□□□□□ -2.42
SSB-209ENST00000470621 CREBBPQ92793 2442 aa-0.06□□□□□ -2.42
SSB-209ENST00000470621 DSTQ03001 7570 aaKnown RBP-0.06□□□□□ -2.42
SSB-209ENST00000470621 UGGT1Q9NYU2 1555 aa-0.06□□□□□ -2.42
SSB-209ENST00000470621 PCLOQ9Y6V0 5065 aa-0.07□□□□□ -2.42
SSB-209ENST00000470621 PRXQ9BXM0 1461 aa-0.07□□□□□ -2.42
SSB-209ENST00000470621 PRLHP81277 87 aa-0.07□□□□□ -2.42
SSB-209ENST00000470621 FLNAP21333 2647 aaKnown RBP-0.07□□□□□ -2.42
SSB-209ENST00000470621 SONP18583 2426 aaKnown RBP-0.07□□□□□ -2.42
SSB-209ENST00000470621 CLASP1Q7Z460 1538 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 ABCA10Q8WWZ4 1543 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 MROH2AA6NES4 1674 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 RYR3Q15413 4870 aa-0.08□□□□□ -2.42
SSB-209ENST00000470621 SPTBN4Q9H254 2564 aa-0.08□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms