RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 SMG1Q96Q15 3661 aaKnown RBP1.67□□□□□ -2.14
COL11A1-208ENST00000470170 FLNAP21333 2647 aaKnown RBP1.66□□□□□ -2.14
COL11A1-208ENST00000470170 DMXL1Q9Y485 3027 aa1.66□□□□□ -2.14
COL11A1-208ENST00000470170 MYO15AQ9UKN7 3530 aa1.66□□□□□ -2.14
COL11A1-208ENST00000470170 FXYD6P3P58550 94 aa1.66□□□□□ -2.14
COL11A1-208ENST00000470170 UBE2DNLQ8IWF7 75 aa1.66□□□□□ -2.14
COL11A1-208ENST00000470170 COL6A5A8TX70 2615 aa1.66□□□□□ -2.14
COL11A1-208ENST00000470170 NCOA6Q14686 2063 aaPredicted RBP1.65□□□□□ -2.14
COL11A1-208ENST00000470170 LOC730098B7Z3J9 87 aa1.65□□□□□ -2.15
COL11A1-208ENST00000470170 LY6G6CO95867 125 aa1.65□□□□□ -2.15
COL11A1-208ENST00000470170 CMC2Q9NRP2 79 aa1.65□□□□□ -2.15
COL11A1-208ENST00000470170 CELSR3Q9NYQ7 3312 aa1.65□□□□□ -2.15
COL11A1-208ENST00000470170 DDX60LQ5H9U9 1706 aaKnown RBP1.65□□□□□ -2.15
COL11A1-208ENST00000470170 DOT1LQ8TEK3 1739 aa1.65□□□□□ -2.15
COL11A1-208ENST00000470170 NBASA2RRP1 2371 aa1.65□□□□□ -2.15
COL11A1-208ENST00000470170 ANKHD1Q8IWZ3 2542 aaKnown RBP1.65□□□□□ -2.15
COL11A1-208ENST00000470170 MYO7AQ13402 2215 aa1.64□□□□□ -2.15
COL11A1-208ENST00000470170 ZNF831Q5JPB2 1677 aa1.64□□□□□ -2.15
COL11A1-208ENST00000470170 FAM208AQ9UK61 1670 aaKnown RBP1.64□□□□□ -2.15
COL11A1-208ENST00000470170 ZZEF1O43149 2961 aa1.64□□□□□ -2.15
COL11A1-208ENST00000470170 K7EMI3 77 aa1.64□□□□□ -2.15
COL11A1-208ENST00000470170 PCOTHQ58A44 107 aa1.64□□□□□ -2.15
COL11A1-208ENST00000470170 ICE1Q9Y2F5 2266 aa1.64□□□□□ -2.15
COL11A1-208ENST00000470170 DSPP15924 2871 aaKnown RBP1.64□□□□□ -2.15
COL11A1-208ENST00000470170 RELNP78509 3460 aa1.64□□□□□ -2.15
COL11A1-208ENST00000470170 NBEAL2Q6ZNJ1 2754 aa1.64□□□□□ -2.15
COL11A1-208ENST00000470170 USP9YO00507 2555 aaPredicted RBP1.63□□□□□ -2.15
COL11A1-208ENST00000470170 NF1P21359 2839 aa1.63□□□□□ -2.15
COL11A1-208ENST00000470170 SPTY2D1-AS1A0A0U1RR47 76 aa1.63□□□□□ -2.15
COL11A1-208ENST00000470170 CPSF4LA6NMK7 179 aaKnown RBP1.63□□□□□ -2.15
COL11A1-208ENST00000470170 DEFB114Q30KQ6 69 aa1.63□□□□□ -2.15
COL11A1-208ENST00000470170 VPS13AQ96RL7 3174 aa1.63□□□□□ -2.15
COL11A1-208ENST00000470170 AHCTF1Q8WYP5 2266 aa1.63□□□□□ -2.15
COL11A1-208ENST00000470170 HIVEP3Q5T1R4 2406 aa1.62□□□□□ -2.15
COL11A1-208ENST00000470170 INTS1Q8N201 2190 aaKnown RBP1.62□□□□□ -2.15
COL11A1-208ENST00000470170 CACNA1EQ15878 2313 aa1.62□□□□□ -2.15
COL11A1-208ENST00000470170 TLN2Q9Y4G6 2542 aa1.62□□□□□ -2.15
COL11A1-208ENST00000470170 PLNP26678 52 aa1.62□□□□□ -2.15
COL11A1-208ENST00000470170 DEFB119Q8N690 84 aa1.62□□□□□ -2.15
COL11A1-208ENST00000470170 COL6A6A6NMZ7 2263 aa1.62□□□□□ -2.15
COL11A1-208ENST00000470170 LRRC37AA6NMS7 1700 aa1.62□□□□□ -2.15
COL11A1-208ENST00000470170 MRPL33O75394 65 aaKnown RBP1.61□□□□□ -2.15
COL11A1-208ENST00000470170 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
COL11A1-208ENST00000470170 CSPG4Q6UVK1 2322 aa1.61□□□□□ -2.15
COL11A1-208ENST00000470170 PKD1L1Q8TDX9 2849 aa1.61□□□□□ -2.15
COL11A1-208ENST00000470170 NBEAQ8NFP9 2946 aa1.6□□□□□ -2.15
COL11A1-208ENST00000470170 DUOX1Q9NRD9 1551 aa1.6□□□□□ -2.15
COL11A1-208ENST00000470170 ACACAQ13085 2346 aa1.6□□□□□ -2.15
COL11A1-208ENST00000470170 ANGP03950 147 aaKnown RBP1.6□□□□□ -2.15
COL11A1-208ENST00000470170 KCNQ1DNQ9H478 68 aa1.6□□□□□ -2.15
COL11A1-208ENST00000470170 CRIPTQ9P021 101 aa1.6□□□□□ -2.15
COL11A1-208ENST00000470170 ABRACLQ9P1F3 81 aa1.6□□□□□ -2.15
COL11A1-208ENST00000470170 URB1O60287 2271 aaKnown RBP1.6□□□□□ -2.15
COL11A1-208ENST00000470170 LOC400499M0QZD8 3231 aa1.6□□□□□ -2.15
COL11A1-208ENST00000470170 SPTBN1Q01082 2364 aaKnown RBP1.59□□□□□ -2.15
COL11A1-208ENST00000470170 TRIOO75962 3097 aa1.59□□□□□ -2.15
COL11A1-208ENST00000470170 ETDCA0A1B0GVM5 59 aa1.59□□□□□ -2.15
COL11A1-208ENST00000470170 M0R1W7 72 aa1.59□□□□□ -2.15
COL11A1-208ENST00000470170 COL12A1Q99715 3063 aa1.59□□□□□ -2.16
COL11A1-208ENST00000470170 MED13LQ71F56 2210 aa1.59□□□□□ -2.16
COL11A1-208ENST00000470170 FREM2Q5SZK8 3169 aa1.59□□□□□ -2.16
COL11A1-208ENST00000470170 ARL14EPLP0DKL9 152 aa1.58□□□□□ -2.16
COL11A1-208ENST00000470170 USMG5Q96IX5 58 aa1.58□□□□□ -2.16
COL11A1-208ENST00000470170 DMDP11532 3685 aa1.58□□□□□ -2.16
COL11A1-208ENST00000470170 FRYLO94915 3013 aa1.58□□□□□ -2.16
COL11A1-208ENST00000470170 DNHD1Q96M86 4753 aa1.57□□□□□ -2.16
COL11A1-208ENST00000470170 DEFB124Q8NES8 71 aa1.57□□□□□ -2.16
COL11A1-208ENST00000470170 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.56□□□□□ -2.16
COL11A1-208ENST00000470170 WNK1Q9H4A3 2382 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 DEFB131BA0A096LNP1 70 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 SMIM27A0A1W2PRY6 76 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 IGIPA6NJ69 53 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 I3L3M4 83 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 PIGYQ3MUY2 71 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 ANKRD36CQ5JPF3 1778 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 ITPR2Q14571 2701 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 PLXNB2O15031 1838 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 APC2O95996 2303 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 NFAT5O94916 1531 aa1.56□□□□□ -2.16
COL11A1-208ENST00000470170 DMXL2Q8TDJ6 3036 aa1.55□□□□□ -2.16
COL11A1-208ENST00000470170 H0YGX0 51 aa1.55□□□□□ -2.16
COL11A1-208ENST00000470170 K7EIL1 84 aa1.55□□□□□ -2.16
COL11A1-208ENST00000470170 TP53AIP1Q9HCN2 124 aa1.55□□□□□ -2.16
COL11A1-208ENST00000470170 DDX60Q8IY21 1712 aaKnown RBP1.54□□□□□ -2.16
COL11A1-208ENST00000470170 VWFP04275 2813 aa1.54□□□□□ -2.16
COL11A1-208ENST00000470170 BOD1L1Q8NFC6 3051 aa1.54□□□□□ -2.16
COL11A1-208ENST00000470170 MGAM2Q2M2H8 2515 aa1.54□□□□□ -2.16
COL11A1-208ENST00000470170 HIVEP1P15822 2718 aa1.54□□□□□ -2.16
COL11A1-208ENST00000470170 WDFY3Q8IZQ1 3526 aa1.54□□□□□ -2.16
COL11A1-208ENST00000470170 NBPF19A0A087WUL8 3843 aa1.54□□□□□ -2.16
COL11A1-208ENST00000470170 UTP20O75691 2785 aaKnown RBP1.53□□□□□ -2.16
COL11A1-208ENST00000470170 ABCA1O95477 2261 aa1.53□□□□□ -2.16
COL11A1-208ENST00000470170 F5P12259 2224 aa1.53□□□□□ -2.16
COL11A1-208ENST00000470170 NIPBLQ6KC79 2804 aaeCLIP1.53□□□□□ -2.16
COL11A1-208ENST00000470170 OTOGQ6ZRI0 2925 aa1.53□□□□□ -2.16
COL11A1-208ENST00000470170 CACNA1CQ13936 2221 aa1.52□□□□□ -2.17
COL11A1-208ENST00000470170 COX6B2Q6YFQ2 88 aa1.52□□□□□ -2.17
COL11A1-208ENST00000470170 CHD9Q3L8U1 2897 aa1.52□□□□□ -2.17
COL11A1-208ENST00000470170 LRBAP50851 2863 aa1.51□□□□□ -2.17
COL11A1-208ENST00000470170 LINC01546A6NGU7 62 aa1.51□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms