RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 SPRR1AP35321 89 aa3.98□□□□□ -1.77
CCDC144A-212ENST00000470068 PHF5AQ7RTV0 110 aaKnown RBP3.98□□□□□ -1.77
CCDC144A-212ENST00000470068 SPACA4Q8TDM5 124 aa3.98□□□□□ -1.77
CCDC144A-212ENST00000470068 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
CCDC144A-212ENST00000470068 TENM2Q9NT68 2774 aa3.97□□□□□ -1.77
CCDC144A-212ENST00000470068 HRES1P13985 223 aa3.97□□□□□ -1.77
CCDC144A-212ENST00000470068 Q96NJ1 140 aa3.97□□□□□ -1.77
CCDC144A-212ENST00000470068 OCR1Q9BZK8 76 aa3.97□□□□□ -1.77
CCDC144A-212ENST00000470068 CFAP54Q96N23 3096 aa3.96□□□□□ -1.77
CCDC144A-212ENST00000470068 KRTAP10-3P60369 221 aa3.96□□□□□ -1.78
CCDC144A-212ENST00000470068 RPS29P62273 56 aaKnown RBP3.96□□□□□ -1.78
CCDC144A-212ENST00000470068 AKAP13Q12802 2813 aa3.96□□□□□ -1.78
CCDC144A-212ENST00000470068 SZT2Q5T011 3432 aa3.96□□□□□ -1.78
CCDC144A-212ENST00000470068 APLNQ9ULZ1 77 aa3.96□□□□□ -1.78
CCDC144A-212ENST00000470068 DMAC1Q96GE9 116 aa3.95□□□□□ -1.78
CCDC144A-212ENST00000470068 GIG44P09565 113 aaPredicted RBP3.94□□□□□ -1.78
CCDC144A-212ENST00000470068 C9orf129Q5T035 196 aaKnown RBP3.94□□□□□ -1.78
CCDC144A-212ENST00000470068 KRTAP17-1Q9BYP8 105 aa3.94□□□□□ -1.78
CCDC144A-212ENST00000470068 FRYQ5TBA9 3013 aa3.94□□□□□ -1.78
CCDC144A-212ENST00000470068 FP248Q71RG6 208 aaPredicted RBP3.93□□□□□ -1.78
CCDC144A-212ENST00000470068 PLAC8Q9NZF1 115 aa3.93□□□□□ -1.78
CCDC144A-212ENST00000470068 A0A1W2PNM2 257 aa3.92□□□□□ -1.78
CCDC144A-212ENST00000470068 TRIOO75962 3097 aa3.92□□□□□ -1.78
CCDC144A-212ENST00000470068 ITPR1Q14643 2758 aa3.91□□□□□ -1.78
CCDC144A-212ENST00000470068 LINC00483Q53H64 154 aa3.91□□□□□ -1.78
CCDC144A-212ENST00000470068 LAMA2P24043 3122 aaKnown RBP3.91□□□□□ -1.78
CCDC144A-212ENST00000470068 OXTP01178 125 aa3.91□□□□□ -1.78
CCDC144A-212ENST00000470068 PRUNE2Q8WUY3 3088 aa3.91□□□□□ -1.78
CCDC144A-212ENST00000470068 LUZP6Q538Z0 58 aa3.9□□□□□ -1.78
CCDC144A-212ENST00000470068 SPINT4Q6UDR6 99 aa3.9□□□□□ -1.78
CCDC144A-212ENST00000470068 LAMA3Q16787 3333 aa3.9□□□□□ -1.79
CCDC144A-212ENST00000470068 NBEAL2Q6ZNJ1 2754 aa3.89□□□□□ -1.79
CCDC144A-212ENST00000470068 Q8N1X5 172 aa3.89□□□□□ -1.79
CCDC144A-212ENST00000470068 DEFB116Q30KQ4 102 aa3.88□□□□□ -1.79
CCDC144A-212ENST00000470068 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
CCDC144A-212ENST00000470068 PRR26Q8N8Z3 221 aa3.87□□□□□ -1.79
CCDC144A-212ENST00000470068 MGAQ8IWI9 3026 aa3.87□□□□□ -1.79
CCDC144A-212ENST00000470068 LINC01554Q52M75 96 aa3.86□□□□□ -1.79
CCDC144A-212ENST00000470068 ZCCHC13Q8WW36 166 aaKnown RBP3.86□□□□□ -1.79
CCDC144A-212ENST00000470068 FBN3Q75N90 2809 aa3.85□□□□□ -1.79
CCDC144A-212ENST00000470068 DSCR10P59022 87 aa3.85□□□□□ -1.79
CCDC144A-212ENST00000470068 TENM3Q9P273 2699 aa3.85□□□□□ -1.79
CCDC144A-212ENST00000470068 CHTF8P0CG12 524 aa3.85□□□□□ -1.79
CCDC144A-212ENST00000470068 A0A1B0GU33 70 aa3.84□□□□□ -1.79
CCDC144A-212ENST00000470068 CSAG1Q6PB30 78 aa3.84□□□□□ -1.79
CCDC144A-212ENST00000470068 Q6ZR54 194 aa3.84□□□□□ -1.8
CCDC144A-212ENST00000470068 C5orf42Q9H799 3197 aa3.84□□□□□ -1.8
CCDC144A-212ENST00000470068 TACC2O95359 2948 aa3.83□□□□□ -1.8
CCDC144A-212ENST00000470068 MMP24-AS1A0A0U1RRL7 71 aa3.83□□□□□ -1.8
CCDC144A-212ENST00000470068 SEC61BP60468 96 aaKnown RBP3.83□□□□□ -1.8
CCDC144A-212ENST00000470068 LINC00472Q9H8W2 130 aa3.83□□□□□ -1.8
CCDC144A-212ENST00000470068 NIPBLQ6KC79 2804 aaeCLIP3.83□□□□□ -1.8
CCDC144A-212ENST00000470068 MKI67P46013 3256 aaKnown RBP3.82□□□□□ -1.8
CCDC144A-212ENST00000470068 Q8N9P0 234 aaPredicted RBP3.82□□□□□ -1.8
CCDC144A-212ENST00000470068 PKD1L1Q8TDX9 2849 aa3.81□□□□□ -1.8
CCDC144A-212ENST00000470068 A0A1W2PNN7 141 aa3.81□□□□□ -1.8
CCDC144A-212ENST00000470068 WDFY4Q6ZS81 3184 aa3.81□□□□□ -1.8
CCDC144A-212ENST00000470068 COL6A3P12111 3177 aa3.81□□□□□ -1.8
CCDC144A-212ENST00000470068 FAM168BA1KXE4 195 aa3.8□□□□□ -1.8
CCDC144A-212ENST00000470068 TNRC18O15417 2968 aaPredicted RBP3.8□□□□□ -1.8
CCDC144A-212ENST00000470068 FRYLO94915 3013 aa3.79□□□□□ -1.8
CCDC144A-212ENST00000470068 Q6ZSA8 131 aa3.79□□□□□ -1.8
CCDC144A-212ENST00000470068 NOTCH2NLQ7Z3S9 236 aa3.79□□□□□ -1.8
CCDC144A-212ENST00000470068 HTTP42858 3142 aa3.77□□□□□ -1.81
CCDC144A-212ENST00000470068 S4R3F8 94 aa3.75□□□□□ -1.81
CCDC144A-212ENST00000470068 CFAP47Q6ZTR5 3102 aa3.75□□□□□ -1.81
CCDC144A-212ENST00000470068 RPL37P61927 97 aaKnown RBP3.74□□□□□ -1.81
CCDC144A-212ENST00000470068 KRTAP26-1Q6PEX3 210 aa3.74□□□□□ -1.81
CCDC144A-212ENST00000470068 LAMA1P25391 3075 aa3.74□□□□□ -1.81
CCDC144A-212ENST00000470068 BRCA2P51587 3418 aa3.73□□□□□ -1.81
CCDC144A-212ENST00000470068 TENM1Q9UKZ4 2725 aa3.73□□□□□ -1.81
CCDC144A-212ENST00000470068 NBEAQ8NFP9 2946 aa3.73□□□□□ -1.81
CCDC144A-212ENST00000470068 Q5W150 140 aa3.73□□□□□ -1.81
CCDC144A-212ENST00000470068 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.73□□□□□ -1.81
CCDC144A-212ENST00000470068 KRTAP29-1A8MX34 341 aaPredicted RBP3.72□□□□□ -1.81
CCDC144A-212ENST00000470068 KRTAP4-16G5E9R7 235 aaPredicted RBP3.72□□□□□ -1.81
CCDC144A-212ENST00000470068 COL12A1Q99715 3063 aa3.72□□□□□ -1.81
CCDC144A-212ENST00000470068 CHD7Q9P2D1 2997 aa3.72□□□□□ -1.81
CCDC144A-212ENST00000470068 ROMO1P60602 79 aa3.72□□□□□ -1.81
CCDC144A-212ENST00000470068 M0QZ58 72 aa3.72□□□□□ -1.81
CCDC144A-212ENST00000470068 SPATA8Q6RVD6 105 aa3.72□□□□□ -1.81
CCDC144A-212ENST00000470068 VCANP13611 3396 aa3.71□□□□□ -1.82
CCDC144A-212ENST00000470068 UNC80Q8N2C7 3258 aa3.71□□□□□ -1.82
CCDC144A-212ENST00000470068 Q5VV11 94 aa3.71□□□□□ -1.82
CCDC144A-212ENST00000470068 ANAPC11Q9NYG5 84 aa3.7□□□□□ -1.82
CCDC144A-212ENST00000470068 CYSTM1Q9H1C7 97 aa3.7□□□□□ -1.82
CCDC144A-212ENST00000470068 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
CCDC144A-212ENST00000470068 SRRM2Q9UQ35 2752 aaKnown RBP3.69□□□□□ -1.82
CCDC144A-212ENST00000470068 A6NN06 94 aa3.69□□□□□ -1.82
CCDC144A-212ENST00000470068 H1FX-AS1Q4G0G2 97 aa3.69□□□□□ -1.82
CCDC144A-212ENST00000470068 KRTAP10-1P60331 282 aa3.68□□□□□ -1.82
CCDC144A-212ENST00000470068 KRTAP10-2P60368 255 aa3.68□□□□□ -1.82
CCDC144A-212ENST00000470068 KRTAP16-1A8MUX0 517 aa3.68□□□□□ -1.82
CCDC144A-212ENST00000470068 APCP25054 2843 aa3.67□□□□□ -1.82
CCDC144A-212ENST00000470068 FBN2P35556 2912 aa3.67□□□□□ -1.82
CCDC144A-212ENST00000470068 CR1P17927 2039 aa3.66□□□□□ -1.82
CCDC144A-212ENST00000470068 SPINK7P58062 85 aa3.65□□□□□ -1.82
CCDC144A-212ENST00000470068 LCE2DQ5TA82 110 aaPredicted RBP3.65□□□□□ -1.82
CCDC144A-212ENST00000470068 TGP01266 2768 aa3.65□□□□□ -1.82
CCDC144A-212ENST00000470068 C9orf92A6NGG3 77 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms