RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 UTP20O75691 2785 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-207ENST00000469334 ANKRD17O75179 2603 aaKnown RBP5.64□□□□□ -1.51
SMARCE1-207ENST00000469334 TEX15Q9BXT5 2789 aa5.63□□□□□ -1.51
SMARCE1-207ENST00000469334 CENPEQ02224 2701 aa5.62□□□□□ -1.51
SMARCE1-207ENST00000469334 MYO9AB2RTY4 2548 aa5.62□□□□□ -1.51
SMARCE1-207ENST00000469334 IGKV2-24A0A0C4DH68 120 aa5.62□□□□□ -1.51
SMARCE1-207ENST00000469334 A0A0G2JQZ4 141 aa5.62□□□□□ -1.51
SMARCE1-207ENST00000469334 A0A1W2PNN7 141 aa5.62□□□□□ -1.51
SMARCE1-207ENST00000469334 LINC01556Q5JQF7 62 aa5.62□□□□□ -1.51
SMARCE1-207ENST00000469334 VPS13CQ709C8 3753 aa5.61□□□□□ -1.51
SMARCE1-207ENST00000469334 FAM168BA1KXE4 195 aa5.61□□□□□ -1.51
SMARCE1-207ENST00000469334 RTL8CO15255 209 aa5.61□□□□□ -1.51
SMARCE1-207ENST00000469334 FN1P02751 2386 aaKnown RBP5.6□□□□□ -1.51
SMARCE1-207ENST00000469334 H0Y9J4 135 aa5.6□□□□□ -1.51
SMARCE1-207ENST00000469334 SPRR1BP22528 89 aa5.6□□□□□ -1.51
SMARCE1-207ENST00000469334 KRTAP7-1Q8IUC3 87 aa5.6□□□□□ -1.51
SMARCE1-207ENST00000469334 MDFIQ99750 246 aa5.6□□□□□ -1.51
SMARCE1-207ENST00000469334 NOTCH2Q04721 2471 aa5.59□□□□□ -1.51
SMARCE1-207ENST00000469334 USP9YO00507 2555 aaPredicted RBP5.59□□□□□ -1.51
SMARCE1-207ENST00000469334 APCP25054 2843 aa5.58□□□□□ -1.52
SMARCE1-207ENST00000469334 PRR26Q8N8Z3 221 aa5.58□□□□□ -1.52
SMARCE1-207ENST00000469334 SPATA8Q6RVD6 105 aa5.57□□□□□ -1.52
SMARCE1-207ENST00000469334 DEFB113Q30KQ7 82 aa5.57□□□□□ -1.52
SMARCE1-207ENST00000469334 ADM2Q7Z4H4 148 aa5.57□□□□□ -1.52
SMARCE1-207ENST00000469334 MXRA5Q9NR99 2828 aa5.57□□□□□ -1.52
SMARCE1-207ENST00000469334 CELSR2Q9HCU4 2923 aa5.56□□□□□ -1.52
SMARCE1-207ENST00000469334 J3QKU1 62 aa5.56□□□□□ -1.52
SMARCE1-207ENST00000469334 RETNLBQ9BQ08 111 aa5.56□□□□□ -1.52
SMARCE1-207ENST00000469334 KRTAP21-3Q3LHN1 58 aa5.55□□□□□ -1.52
SMARCE1-207ENST00000469334 C8orf17Q9NRJ1 99 aa5.55□□□□□ -1.52
SMARCE1-207ENST00000469334 TEP1Q99973 2627 aaKnown RBP5.55□□□□□ -1.52
SMARCE1-207ENST00000469334 ITPR2Q14571 2701 aa5.55□□□□□ -1.52
SMARCE1-207ENST00000469334 ACYP2P14621 99 aa5.54□□□□□ -1.52
SMARCE1-207ENST00000469334 FBN3Q75N90 2809 aa5.54□□□□□ -1.52
SMARCE1-207ENST00000469334 PRLHP81277 87 aa5.53□□□□□ -1.52
SMARCE1-207ENST00000469334 AKAP9Q99996 3911 aa5.53□□□□□ -1.52
SMARCE1-207ENST00000469334 DNAH10OSP0CZ25 163 aa5.53□□□□□ -1.52
SMARCE1-207ENST00000469334 DOPEY1Q5JWR5 2465 aa5.51□□□□□ -1.53
SMARCE1-207ENST00000469334 A0A1B0GU69 56 aa5.51□□□□□ -1.53
SMARCE1-207ENST00000469334 LOC100996750A0A140TA64 210 aa5.5□□□□□ -1.53
SMARCE1-207ENST00000469334 Q96NJ1 140 aa5.5□□□□□ -1.53
SMARCE1-207ENST00000469334 MRPL34Q9BQ48 92 aaKnown RBP5.5□□□□□ -1.53
SMARCE1-207ENST00000469334 KRTAP4-6Q9BYQ5 205 aa5.5□□□□□ -1.53
SMARCE1-207ENST00000469334 CSMD2Q7Z408 3487 aa5.5□□□□□ -1.53
SMARCE1-207ENST00000469334 KRTAP1-3Q8IUG1 177 aa5.5□□□□□ -1.53
SMARCE1-207ENST00000469334 A0A1B0GVX0 72 aa5.49□□□□□ -1.53
SMARCE1-207ENST00000469334 UQCR11O14957 56 aa5.49□□□□□ -1.53
SMARCE1-207ENST00000469334 MIR22HGQ0VDD5 57 aa5.49□□□□□ -1.53
SMARCE1-207ENST00000469334 ZANQ9Y493 2812 aa5.49□□□□□ -1.53
SMARCE1-207ENST00000469334 ABCA12Q86UK0 2595 aa5.48□□□□□ -1.53
SMARCE1-207ENST00000469334 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
SMARCE1-207ENST00000469334 DMAC1Q96GE9 116 aa5.47□□□□□ -1.53
SMARCE1-207ENST00000469334 CDK2AP2O75956 126 aa5.45□□□□□ -1.54
SMARCE1-207ENST00000469334 KRTAP10-3P60369 221 aa5.45□□□□□ -1.54
SMARCE1-207ENST00000469334 OTOGQ6ZRI0 2925 aa5.45□□□□□ -1.54
SMARCE1-207ENST00000469334 KRTAP10-9P60411 292 aa5.44□□□□□ -1.54
SMARCE1-207ENST00000469334 NBEAL2Q6ZNJ1 2754 aa5.44□□□□□ -1.54
SMARCE1-207ENST00000469334 HIVEP2P31629 2446 aa5.44□□□□□ -1.54
SMARCE1-207ENST00000469334 ALMS1Q8TCU4 4167 aa5.43□□□□□ -1.54
SMARCE1-207ENST00000469334 FBN2P35556 2912 aa5.43□□□□□ -1.54
SMARCE1-207ENST00000469334 IGHV6-1A0A0B4J1U7 121 aa5.43□□□□□ -1.54
SMARCE1-207ENST00000469334 KRTAP13-3Q3SY46 172 aa5.43□□□□□ -1.54
SMARCE1-207ENST00000469334 A0A096LNI7 61 aa5.42□□□□□ -1.54
SMARCE1-207ENST00000469334 CASC10Q5T4H9 136 aa5.42□□□□□ -1.54
SMARCE1-207ENST00000469334 PDZD2O15018 2839 aa5.41□□□□□ -1.54
SMARCE1-207ENST00000469334 POLQO75417 2590 aa5.41□□□□□ -1.54
SMARCE1-207ENST00000469334 ZNF861PO60384 105 aa5.39□□□□□ -1.55
SMARCE1-207ENST00000469334 KRTAP1-1Q07627 177 aa5.39□□□□□ -1.55
SMARCE1-207ENST00000469334 TENM2Q9NT68 2774 aa5.39□□□□□ -1.55
SMARCE1-207ENST00000469334 MTORP42345 2549 aa5.38□□□□□ -1.55
SMARCE1-207ENST00000469334 SETD2Q9BYW2 2564 aaPredicted RBP5.38□□□□□ -1.55
SMARCE1-207ENST00000469334 C1orf134Q5TEV5 83 aa5.38□□□□□ -1.55
SMARCE1-207ENST00000469334 NF1P21359 2839 aa5.38□□□□□ -1.55
SMARCE1-207ENST00000469334 NIPBLQ6KC79 2804 aaeCLIP5.38□□□□□ -1.55
SMARCE1-207ENST00000469334 CCDC168Q8NDH2 2452 aa5.38□□□□□ -1.55
SMARCE1-207ENST00000469334 Q5W150 140 aa5.36□□□□□ -1.55
SMARCE1-207ENST00000469334 KRTAP13-1Q8IUC0 172 aa5.36□□□□□ -1.55
SMARCE1-207ENST00000469334 SONP18583 2426 aaKnown RBP5.36□□□□□ -1.55
SMARCE1-207ENST00000469334 LINC00483Q53H64 154 aa5.35□□□□□ -1.55
SMARCE1-207ENST00000469334 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
SMARCE1-207ENST00000469334 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
SMARCE1-207ENST00000469334 HIVEP1P15822 2718 aa5.35□□□□□ -1.55
SMARCE1-207ENST00000469334 K7EIL1 84 aa5.35□□□□□ -1.55
SMARCE1-207ENST00000469334 ANK3Q12955 4377 aaKnown RBP5.34□□□□□ -1.55
SMARCE1-207ENST00000469334 ROMO1P60602 79 aa5.34□□□□□ -1.55
SMARCE1-207ENST00000469334 KRTAP11-1Q8IUC1 163 aa5.34□□□□□ -1.55
SMARCE1-207ENST00000469334 ZNF706Q9Y5V0 76 aaPredicted RBP5.34□□□□□ -1.55
SMARCE1-207ENST00000469334 ZNF469Q96JG9 3925 aaPredicted RBP5.34□□□□□ -1.56
SMARCE1-207ENST00000469334 F8P00451 2351 aa5.33□□□□□ -1.56
SMARCE1-207ENST00000469334 IGLV9-49A0A0B4J1Y8 123 aa5.33□□□□□ -1.56
SMARCE1-207ENST00000469334 IGLV7-43P04211 117 aa5.33□□□□□ -1.56
SMARCE1-207ENST00000469334 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
SMARCE1-207ENST00000469334 ITPR3Q14573 2671 aa5.32□□□□□ -1.56
SMARCE1-207ENST00000469334 CHTF8P0CG12 524 aa5.32□□□□□ -1.56
SMARCE1-207ENST00000469334 C14orf177Q52M58 125 aa5.32□□□□□ -1.56
SMARCE1-207ENST00000469334 NOTCH2NLQ7Z3S9 236 aa5.32□□□□□ -1.56
SMARCE1-207ENST00000469334 FAM229AH3BQW9 127 aa5.32□□□□□ -1.56
SMARCE1-207ENST00000469334 DNHD1Q96M86 4753 aa5.3□□□□□ -1.56
SMARCE1-207ENST00000469334 IGKV2-30P06310 120 aa5.3□□□□□ -1.56
SMARCE1-207ENST00000469334 CUBNO60494 3623 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms