RNA–Protein interactions for RNA: ENST00000466696.1

CHMP2B-202, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2

Gene CHMP2B, Length 664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-202ENST00000466696 RBP2P50120 134 aa-0.62□□□□□ -2.51
CHMP2B-202ENST00000466696 DEFB1P60022 68 aa-0.62□□□□□ -2.51
CHMP2B-202ENST00000466696 NIPBLQ6KC79 2804 aaeCLIP-0.63□□□□□ -2.51
CHMP2B-202ENST00000466696 M0R143 59 aa-0.63□□□□□ -2.51
CHMP2B-202ENST00000466696 CCNB3Q8WWL7 1395 aa-0.63□□□□□ -2.51
CHMP2B-202ENST00000466696 DNAH2Q9P225 4427 aa-0.63□□□□□ -2.51
CHMP2B-202ENST00000466696 PLXNC1O60486 1568 aa-0.63□□□□□ -2.51
CHMP2B-202ENST00000466696 KIAA1109Q2LD37 5005 aa-0.63□□□□□ -2.51
CHMP2B-202ENST00000466696 LAMA2P24043 3122 aaKnown RBP-0.63□□□□□ -2.51
CHMP2B-202ENST00000466696 ANK3Q12955 4377 aaKnown RBP-0.63□□□□□ -2.51
CHMP2B-202ENST00000466696 USP32Q8NFA0 1604 aa-0.64□□□□□ -2.51
CHMP2B-202ENST00000466696 KALRNO60229 2985 aa-0.64□□□□□ -2.51
CHMP2B-202ENST00000466696 NBEAL2Q6ZNJ1 2754 aa-0.64□□□□□ -2.51
CHMP2B-202ENST00000466696 CEBPZOSA8MTT3 80 aa-0.64□□□□□ -2.51
CHMP2B-202ENST00000466696 NCMAPQ5T1S8 102 aa-0.64□□□□□ -2.51
CHMP2B-202ENST00000466696 C14orf144Q96I85 54 aa-0.64□□□□□ -2.51
CHMP2B-202ENST00000466696 Q9H521 79 aa-0.64□□□□□ -2.51
CHMP2B-202ENST00000466696 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.64□□□□□ -2.51
CHMP2B-202ENST00000466696 NWD1Q149M9 1564 aa-0.65□□□□□ -2.51
CHMP2B-202ENST00000466696 MRPL33O75394 65 aaKnown RBP-0.65□□□□□ -2.51
CHMP2B-202ENST00000466696 MT1HP80294 61 aa-0.65□□□□□ -2.51
CHMP2B-202ENST00000466696 DEPDC5O75140 1603 aa-0.65□□□□□ -2.51
CHMP2B-202ENST00000466696 DSPP15924 2871 aaKnown RBP-0.65□□□□□ -2.51
CHMP2B-202ENST00000466696 TLN2Q9Y4G6 2542 aa-0.66□□□□□ -2.51
CHMP2B-202ENST00000466696 UMAD1C9J7I0 102 aa-0.66□□□□□ -2.52
CHMP2B-202ENST00000466696 H0YAA0 97 aa-0.66□□□□□ -2.52
CHMP2B-202ENST00000466696 DEFB130BP0DP73 79 aa-0.66□□□□□ -2.52
CHMP2B-202ENST00000466696 DEFB130AP0DP74 79 aa-0.66□□□□□ -2.52
CHMP2B-202ENST00000466696 SNRPFP62306 86 aaKnown RBP-0.66□□□□□ -2.52
CHMP2B-202ENST00000466696 URB2Q14146 1524 aaKnown RBP-0.66□□□□□ -2.52
CHMP2B-202ENST00000466696 SUPT6HQ7KZ85 1726 aaKnown RBP-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 TIAM2Q8IVF5 1701 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 APOBP04114 4563 aaKnown RBP-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 NESP48681 1621 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 MYO3AQ8NEV4 1616 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 NEXMIFQ5QGS0 1516 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 PVALEFA0A1B0GWK0 134 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 LYNX1G3V0Z9 82 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 NDUFA4O00483 81 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 LINC00643Q86TS7 51 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 C20orf78Q9BR46 151 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 RABAC1Q9UI14 185 aa-0.67□□□□□ -2.52
CHMP2B-202ENST00000466696 LCE6AA0A183 80 aa-0.68□□□□□ -2.52
CHMP2B-202ENST00000466696 CEP162Q5TB80 1403 aa-0.68□□□□□ -2.52
CHMP2B-202ENST00000466696 CLPSL2Q6UWE3 100 aa-0.68□□□□□ -2.52
CHMP2B-202ENST00000466696 MYH4Q9Y623 1939 aa-0.68□□□□□ -2.52
CHMP2B-202ENST00000466696 SCN11AQ9UI33 1791 aa-0.68□□□□□ -2.52
CHMP2B-202ENST00000466696 NCOA2Q15596 1464 aa-0.68□□□□□ -2.52
CHMP2B-202ENST00000466696 ABCC10Q5T3U5 1492 aa-0.68□□□□□ -2.52
CHMP2B-202ENST00000466696 RGPD1P0DJD0 1748 aa-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 A0A087WXM4 84 aa-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 S100A8P05109 93 aa-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 PKIAP61925 76 aa-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 S100A16Q96FQ6 103 aaKnown RBP-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 LAMA3Q16787 3333 aa-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 SPTAN1Q13813 2472 aaKnown RBP-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 RYR2Q92736 4967 aa-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 DNHD1Q96M86 4753 aa-0.69□□□□□ -2.52
CHMP2B-202ENST00000466696 DNAH1Q9P2D7 4330 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 THOC2Q8NI27 1593 aaKnown RBP-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 LTN1O94822 1766 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 MYO9AB2RTY4 2548 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 KANTRA0A1W2PQU2 76 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 TNP1P09430 55 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 PYY3Q5JQD4 70 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 ATP5EP2Q5VTU8 51 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 CCDC88BA6NC98 1476 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 WIZO95785 1651 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 POLR1AO95602 1720 aaPredicted RBP-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 RGPD3A6NKT7 1758 aaPredicted RBP-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 RGPD4Q7Z3J3 1758 aa-0.7□□□□□ -2.52
CHMP2B-202ENST00000466696 HFM1A2PYH4 1435 aa-0.71□□□□□ -2.52
CHMP2B-202ENST00000466696 SACSQ9NZJ4 4579 aa-0.71□□□□□ -2.52
CHMP2B-202ENST00000466696 MMP24-AS1A0A0U1RRL7 71 aa-0.71□□□□□ -2.52
CHMP2B-202ENST00000466696 HMGA1P17096 107 aaKnown RBP-0.71□□□□□ -2.52
CHMP2B-202ENST00000466696 NREPQ16612 68 aa-0.71□□□□□ -2.52
CHMP2B-202ENST00000466696 UBL5Q9BZL1 73 aa-0.71□□□□□ -2.52
CHMP2B-202ENST00000466696 FRYQ5TBA9 3013 aa-0.71□□□□□ -2.52
CHMP2B-202ENST00000466696 TRIOO75962 3097 aa-0.71□□□□□ -2.52
CHMP2B-202ENST00000466696 RNF213Q63HN8 5207 aa-0.72□□□□□ -2.52
CHMP2B-202ENST00000466696 DEFB131BA0A096LNP1 70 aa-0.72□□□□□ -2.52
CHMP2B-202ENST00000466696 BVES-AS1Q5T3Y7 98 aa-0.72□□□□□ -2.52
CHMP2B-202ENST00000466696 SNHG12Q9BXW3 62 aa-0.72□□□□□ -2.52
CHMP2B-202ENST00000466696 V9GYS6 101 aa-0.72□□□□□ -2.52
CHMP2B-202ENST00000466696 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.72□□□□□ -2.52
CHMP2B-202ENST00000466696 RELNP78509 3460 aa-0.72□□□□□ -2.53
CHMP2B-202ENST00000466696 CEP295Q9C0D2 2601 aa-0.72□□□□□ -2.53
CHMP2B-202ENST00000466696 KIAA0586Q9BVV6 1533 aa-0.73□□□□□ -2.53
CHMP2B-202ENST00000466696 RANBP2P49792 3224 aaKnown RBP-0.73□□□□□ -2.53
CHMP2B-202ENST00000466696 NOP10Q9NPE3 64 aaKnown RBP-0.73□□□□□ -2.53
CHMP2B-202ENST00000466696 DOT1LQ8TEK3 1739 aa-0.73□□□□□ -2.53
CHMP2B-202ENST00000466696 CMYA5Q8N3K9 4069 aa-0.73□□□□□ -2.53
CHMP2B-202ENST00000466696 C5orf42Q9H799 3197 aa-0.73□□□□□ -2.53
CHMP2B-202ENST00000466696 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.74□□□□□ -2.53
CHMP2B-202ENST00000466696 DIP2BQ9P265 1576 aa-0.74□□□□□ -2.53
CHMP2B-202ENST00000466696 DDX60LQ5H9U9 1706 aaKnown RBP-0.74□□□□□ -2.53
CHMP2B-202ENST00000466696 H3BUA1 57 aa-0.74□□□□□ -2.53
CHMP2B-202ENST00000466696 WT1-ASQ06250 92 aa-0.74□□□□□ -2.53
CHMP2B-202ENST00000466696 MINOS1Q5TGZ0 78 aa-0.74□□□□□ -2.53
CHMP2B-202ENST00000466696 DNAH7Q8WXX0 4024 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms