RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 H1FX-AS1Q4G0G2 97 aa1.54□□□□□ -2.16
SNX4-202ENST00000465505 KAAG1Q9UBP8 84 aa1.54□□□□□ -2.16
SNX4-202ENST00000465505 K7EIL1 84 aa1.53□□□□□ -2.16
SNX4-202ENST00000465505 UNQ6190/PRO20217Q6UXQ8 127 aa1.53□□□□□ -2.16
SNX4-202ENST00000465505 UBE2DNLQ8IWF7 75 aa1.53□□□□□ -2.16
SNX4-202ENST00000465505 CLPSL2Q6UWE3 100 aa1.52□□□□□ -2.17
SNX4-202ENST00000465505 GVINP1Q7Z2Y8 2422 aa1.52□□□□□ -2.17
SNX4-202ENST00000465505 DSPP15924 2871 aaKnown RBP1.51□□□□□ -2.17
SNX4-202ENST00000465505 C10orf95Q9H7T3 257 aa1.51□□□□□ -2.17
SNX4-202ENST00000465505 CEP250Q9BV73 2442 aa1.5□□□□□ -2.17
SNX4-202ENST00000465505 UBR5O95071 2799 aaPredicted RBP1.5□□□□□ -2.17
SNX4-202ENST00000465505 A8MTW9 85 aa1.5□□□□□ -2.17
SNX4-202ENST00000465505 DEFB108AA8MXU0 73 aa1.5□□□□□ -2.17
SNX4-202ENST00000465505 DEFB130BP0DP73 79 aa1.5□□□□□ -2.17
SNX4-202ENST00000465505 DEFB130AP0DP74 79 aa1.5□□□□□ -2.17
SNX4-202ENST00000465505 DEFB109BQ30KR1 87 aa1.5□□□□□ -2.17
SNX4-202ENST00000465505 BRD3OSQ6XYD6 125 aa1.5□□□□□ -2.17
SNX4-202ENST00000465505 MUC6Q6W4X9 2439 aa1.49□□□□□ -2.17
SNX4-202ENST00000465505 OTOGQ6ZRI0 2925 aa1.49□□□□□ -2.17
SNX4-202ENST00000465505 SPTBN4Q9H254 2564 aa1.48□□□□□ -2.17
SNX4-202ENST00000465505 SPRR1AP35321 89 aa1.48□□□□□ -2.17
SNX4-202ENST00000465505 LELP1Q5T871 98 aa1.48□□□□□ -2.17
SNX4-202ENST00000465505 COX14Q96I36 57 aa1.48□□□□□ -2.17
SNX4-202ENST00000465505 TOMM7Q9P0U1 55 aa1.48□□□□□ -2.17
SNX4-202ENST00000465505 COL6A3P12111 3177 aa1.47□□□□□ -2.17
SNX4-202ENST00000465505 CACNA1HO95180 2353 aa1.47□□□□□ -2.17
SNX4-202ENST00000465505 TENM2Q9NT68 2774 aa1.46□□□□□ -2.18
SNX4-202ENST00000465505 H3BUA1 57 aa1.46□□□□□ -2.18
SNX4-202ENST00000465505 DEFB104AQ8WTQ1 72 aa1.46□□□□□ -2.18
SNX4-202ENST00000465505 CREBBPQ92793 2442 aa1.46□□□□□ -2.18
SNX4-202ENST00000465505 KRTAP13-4Q3LI77 160 aa1.45□□□□□ -2.18
SNX4-202ENST00000465505 F8P00451 2351 aa1.45□□□□□ -2.18
SNX4-202ENST00000465505 ABCA2Q9BZC7 2435 aa1.45□□□□□ -2.18
SNX4-202ENST00000465505 ASH1LQ9NR48 2969 aaKnown RBP1.44□□□□□ -2.18
SNX4-202ENST00000465505 MAP1BP46821 2468 aaKnown RBP1.44□□□□□ -2.18
SNX4-202ENST00000465505 H0YGG7 62 aa1.44□□□□□ -2.18
SNX4-202ENST00000465505 SPRR1BP22528 89 aa1.44□□□□□ -2.18
SNX4-202ENST00000465505 Q5VSD8 79 aa1.44□□□□□ -2.18
SNX4-202ENST00000465505 CEP290O15078 2479 aa1.44□□□□□ -2.18
SNX4-202ENST00000465505 BAHCC1Q9P281 2608 aa1.43□□□□□ -2.18
SNX4-202ENST00000465505 APC2O95996 2303 aa1.43□□□□□ -2.18
SNX4-202ENST00000465505 ABCA12Q86UK0 2595 aa1.43□□□□□ -2.18
SNX4-202ENST00000465505 STATHP02808 62 aa1.43□□□□□ -2.18
SNX4-202ENST00000465505 DEFB119Q8N690 84 aa1.43□□□□□ -2.18
SNX4-202ENST00000465505 PRRC2CQ9Y520 2896 aaKnown RBP1.43□□□□□ -2.18
SNX4-202ENST00000465505 SETD2Q9BYW2 2564 aaPredicted RBP1.43□□□□□ -2.18
SNX4-202ENST00000465505 FBN1P35555 2871 aaKnown RBP1.42□□□□□ -2.18
SNX4-202ENST00000465505 CELSR2Q9HCU4 2923 aa1.42□□□□□ -2.18
SNX4-202ENST00000465505 WDR87Q6ZQQ6 2873 aa1.41□□□□□ -2.18
SNX4-202ENST00000465505 VPS13DQ5THJ4 4388 aa1.41□□□□□ -2.18
SNX4-202ENST00000465505 CEP350Q5VT06 3117 aa1.41□□□□□ -2.18
SNX4-202ENST00000465505 NAV2Q8IVL1 2488 aa1.41□□□□□ -2.18
SNX4-202ENST00000465505 TNRC18O15417 2968 aaPredicted RBP1.41□□□□□ -2.18
SNX4-202ENST00000465505 S4R3F8 94 aa1.4□□□□□ -2.19
SNX4-202ENST00000465505 TRANK1O15050 2925 aa1.39□□□□□ -2.19
SNX4-202ENST00000465505 VWFP04275 2813 aa1.39□□□□□ -2.19
SNX4-202ENST00000465505 PKD1L2Q7Z442 2459 aa1.39□□□□□ -2.19
SNX4-202ENST00000465505 CCDC168Q8NDH2 2452 aa1.39□□□□□ -2.19
SNX4-202ENST00000465505 TTC28Q96AY4 2481 aa1.38□□□□□ -2.19
SNX4-202ENST00000465505 KRTAP13-1Q8IUC0 172 aa1.38□□□□□ -2.19
SNX4-202ENST00000465505 DEFB105AQ8NG35 78 aa1.38□□□□□ -2.19
SNX4-202ENST00000465505 RANBP2P49792 3224 aaKnown RBP1.38□□□□□ -2.19
SNX4-202ENST00000465505 SRRM2Q9UQ35 2752 aaKnown RBP1.37□□□□□ -2.19
SNX4-202ENST00000465505 NBPF19A0A087WUL8 3843 aa1.37□□□□□ -2.19
SNX4-202ENST00000465505 DEFB103AP81534 67 aa1.37□□□□□ -2.19
SNX4-202ENST00000465505 KRTAP12-4P60329 112 aa1.36□□□□□ -2.19
SNX4-202ENST00000465505 PRLHP81277 87 aa1.36□□□□□ -2.19
SNX4-202ENST00000465505 NBEAQ8NFP9 2946 aa1.36□□□□□ -2.19
SNX4-202ENST00000465505 APLNQ9ULZ1 77 aa1.36□□□□□ -2.19
SNX4-202ENST00000465505 DNAH11Q96DT5 4516 aa1.36□□□□□ -2.19
SNX4-202ENST00000465505 COL6A5A8TX70 2615 aa1.36□□□□□ -2.19
SNX4-202ENST00000465505 MEGF8Q7Z7M0 2845 aa1.35□□□□□ -2.19
SNX4-202ENST00000465505 APELAP0DMC3 54 aa1.35□□□□□ -2.19
SNX4-202ENST00000465505 NBASA2RRP1 2371 aa1.35□□□□□ -2.19
SNX4-202ENST00000465505 NCOR1O75376 2440 aa1.35□□□□□ -2.19
SNX4-202ENST00000465505 EP300Q09472 2414 aaPredicted RBP1.35□□□□□ -2.19
SNX4-202ENST00000465505 DMBT1Q9UGM3 2413 aaPredicted RBP1.34□□□□□ -2.19
SNX4-202ENST00000465505 H3BUX3 64 aa1.34□□□□□ -2.19
SNX4-202ENST00000465505 NOP10Q9NPE3 64 aaKnown RBP1.34□□□□□ -2.19
SNX4-202ENST00000465505 PRO0255Q9UI72 69 aa1.34□□□□□ -2.19
SNX4-202ENST00000465505 SRCAPQ6ZRS2 3230 aa1.33□□□□□ -2.2
SNX4-202ENST00000465505 HTTP42858 3142 aa1.33□□□□□ -2.2
SNX4-202ENST00000465505 KRTAP12-1P59990 96 aa1.33□□□□□ -2.2
SNX4-202ENST00000465505 DEFB1P60022 68 aa1.33□□□□□ -2.2
SNX4-202ENST00000465505 PRUNE2Q8WUY3 3088 aa1.33□□□□□ -2.2
SNX4-202ENST00000465505 CHD6Q8TD26 2715 aa1.32□□□□□ -2.2
SNX4-202ENST00000465505 RHPN1-AS1Q9BWJ2 59 aa1.32□□□□□ -2.2
SNX4-202ENST00000465505 ZNF292O60281 2723 aa1.32□□□□□ -2.2
SNX4-202ENST00000465505 AKAP9Q99996 3911 aa1.32□□□□□ -2.2
SNX4-202ENST00000465505 RIF1Q5UIP0 2472 aaKnown RBP1.31□□□□□ -2.2
SNX4-202ENST00000465505 CRYBG3Q68DQ2 2970 aa1.31□□□□□ -2.2
SNX4-202ENST00000465505 FRYLO94915 3013 aa1.31□□□□□ -2.2
SNX4-202ENST00000465505 CRCT1Q9UGL9 99 aa1.31□□□□□ -2.2
SNX4-202ENST00000465505 FAM186AA6NE01 2351 aa1.31□□□□□ -2.2
SNX4-202ENST00000465505 ITPR1Q14643 2758 aa1.31□□□□□ -2.2
SNX4-202ENST00000465505 CFAP54Q96N23 3096 aa1.31□□□□□ -2.2
SNX4-202ENST00000465505 CELSR1Q9NYQ6 3014 aa1.3□□□□□ -2.2
SNX4-202ENST00000465505 GOLGB1Q14789 3259 aaKnown RBP1.3□□□□□ -2.2
SNX4-202ENST00000465505 PTPN13Q12923 2485 aa1.3□□□□□ -2.2
SNX4-202ENST00000465505 TRIOO75962 3097 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms