RNA–Protein interactions for RNA: ENST00000465379.1

SP3-205, Transcript of Sp3 transcription factor, humanhuman

TSL 1 (best)

Gene SP3, Length 5,489 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP3-205ENST00000465379 GVINP1Q7Z2Y8 2422 aa1.99□□□□□ -2.09
SP3-205ENST00000465379 SMG1Q96Q15 3661 aaKnown RBP1.98□□□□□ -2.09
SP3-205ENST00000465379 ICE1Q9Y2F5 2266 aa1.98□□□□□ -2.09
SP3-205ENST00000465379 ANKHD1Q8IWZ3 2542 aaKnown RBP1.98□□□□□ -2.09
SP3-205ENST00000465379 SPTBN1Q01082 2364 aaKnown RBP1.98□□□□□ -2.09
SP3-205ENST00000465379 SPTBN2O15020 2390 aa1.98□□□□□ -2.09
SP3-205ENST00000465379 SNRNP200O75643 2136 aaKnown RBP1.98□□□□□ -2.09
SP3-205ENST00000465379 CSMD2Q7Z408 3487 aa1.98□□□□□ -2.09
SP3-205ENST00000465379 CADP27708 2225 aa1.98□□□□□ -2.09
SP3-205ENST00000465379 C2CD3Q4AC94 2353 aa1.98□□□□□ -2.09
SP3-205ENST00000465379 LOC105371267A0A1B0GV96 52 aa1.97□□□□□ -2.09
SP3-205ENST00000465379 DOPEY2Q9Y3R5 2298 aa1.97□□□□□ -2.09
SP3-205ENST00000465379 A0A096LNJ9 63 aa1.97□□□□□ -2.09
SP3-205ENST00000465379 KRTAP9-3Q9BYQ3 159 aa1.97□□□□□ -2.09
SP3-205ENST00000465379 WNK2Q9Y3S1 2297 aa1.96□□□□□ -2.09
SP3-205ENST00000465379 PKDREJQ9NTG1 2253 aa1.96□□□□□ -2.1
SP3-205ENST00000465379 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
SP3-205ENST00000465379 ATRXP46100 2492 aa1.96□□□□□ -2.1
SP3-205ENST00000465379 KRTAP3-1Q9BYR8 98 aa1.96□□□□□ -2.1
SP3-205ENST00000465379 PIEZO1Q92508 2521 aa1.95□□□□□ -2.1
SP3-205ENST00000465379 DOPEY1Q5JWR5 2465 aa1.95□□□□□ -2.1
SP3-205ENST00000465379 NUP214P35658 2090 aaPredicted RBP1.95□□□□□ -2.1
SP3-205ENST00000465379 CACNA1HO95180 2353 aa1.95□□□□□ -2.1
SP3-205ENST00000465379 MT3P25713 68 aa1.95□□□□□ -2.1
SP3-205ENST00000465379 KRTAP13-2Q52LG2 175 aa1.95□□□□□ -2.1
SP3-205ENST00000465379 RP1L1Q8IWN7 2480 aaPredicted RBP1.94□□□□□ -2.1
SP3-205ENST00000465379 KRTAP10-6P60371 365 aaPredicted RBP1.94□□□□□ -2.1
SP3-205ENST00000465379 CEP250Q9BV73 2442 aa1.94□□□□□ -2.1
SP3-205ENST00000465379 KRTAP13-1Q8IUC0 172 aa1.94□□□□□ -2.1
SP3-205ENST00000465379 ABCA1O95477 2261 aa1.94□□□□□ -2.1
SP3-205ENST00000465379 ZFHX2Q9C0A1 2572 aaPredicted RBP1.94□□□□□ -2.1
SP3-205ENST00000465379 KNL1Q8NG31 2342 aa1.94□□□□□ -2.1
SP3-205ENST00000465379 KRTAP5-3Q6L8H2 238 aa1.94□□□□□ -2.1
SP3-205ENST00000465379 KIAA2026Q5HYC2 2103 aa1.94□□□□□ -2.1
SP3-205ENST00000465379 CR1P17927 2039 aa1.93□□□□□ -2.1
SP3-205ENST00000465379 POLEQ07864 2286 aa1.93□□□□□ -2.1
SP3-205ENST00000465379 ACACBO00763 2458 aa1.92□□□□□ -2.1
SP3-205ENST00000465379 RELNP78509 3460 aa1.92□□□□□ -2.1
SP3-205ENST00000465379 MAP1BP46821 2468 aaKnown RBP1.91□□□□□ -2.1
SP3-205ENST00000465379 CUL9Q8IWT3 2517 aa1.91□□□□□ -2.1
SP3-205ENST00000465379 AKAP6Q13023 2319 aa1.9□□□□□ -2.1
SP3-205ENST00000465379 RIF1Q5UIP0 2472 aaKnown RBP1.9□□□□□ -2.11
SP3-205ENST00000465379 CSPG4Q6UVK1 2322 aa1.9□□□□□ -2.11
SP3-205ENST00000465379 GPR179Q6PRD1 2367 aa1.88□□□□□ -2.11
SP3-205ENST00000465379 LRRK2Q5S007 2527 aa1.88□□□□□ -2.11
SP3-205ENST00000465379 PKD1L2Q7Z442 2459 aa1.88□□□□□ -2.11
SP3-205ENST00000465379 MED13LQ71F56 2210 aa1.88□□□□□ -2.11
SP3-205ENST00000465379 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.87□□□□□ -2.11
SP3-205ENST00000465379 KRTAP1-4P0C5Y4 121 aa1.87□□□□□ -2.11
SP3-205ENST00000465379 SORL1Q92673 2214 aa1.86□□□□□ -2.11
SP3-205ENST00000465379 ARHGAP32A7KAX9 2087 aa1.86□□□□□ -2.11
SP3-205ENST00000465379 KRTAP15-1Q3LI76 137 aa1.86□□□□□ -2.11
SP3-205ENST00000465379 FN1P02751 2386 aaKnown RBP1.85□□□□□ -2.11
SP3-205ENST00000465379 WNK1Q9H4A3 2382 aa1.85□□□□□ -2.11
SP3-205ENST00000465379 KRTAP10-7P60409 375 aaPredicted RBP1.85□□□□□ -2.11
SP3-205ENST00000465379 CUBNO60494 3623 aa1.85□□□□□ -2.11
SP3-205ENST00000465379 TNCP24821 2201 aa1.85□□□□□ -2.11
SP3-205ENST00000465379 KRTAP8-1Q8IUC2 63 aa1.84□□□□□ -2.11
SP3-205ENST00000465379 KRTAP9-8Q9BYQ0 159 aa1.84□□□□□ -2.11
SP3-205ENST00000465379 F8P00451 2351 aa1.84□□□□□ -2.11
SP3-205ENST00000465379 SPG11Q96JI7 2443 aa1.83□□□□□ -2.12
SP3-205ENST00000465379 UNC80Q8N2C7 3258 aa1.83□□□□□ -2.12
SP3-205ENST00000465379 ROS1P08922 2347 aa1.83□□□□□ -2.12
SP3-205ENST00000465379 KRTAP13-4Q3LI77 160 aa1.83□□□□□ -2.12
SP3-205ENST00000465379 HIVEP3Q5T1R4 2406 aa1.83□□□□□ -2.12
SP3-205ENST00000465379 TRIOO75962 3097 aa1.82□□□□□ -2.12
SP3-205ENST00000465379 KRTAP12-2P59991 146 aa1.82□□□□□ -2.12
SP3-205ENST00000465379 TTC28Q96AY4 2481 aa1.81□□□□□ -2.12
SP3-205ENST00000465379 ANKRD17O75179 2603 aaKnown RBP1.8□□□□□ -2.12
SP3-205ENST00000465379 CACNA1AO00555 2505 aa1.8□□□□□ -2.12
SP3-205ENST00000465379 KRTAP10-12P60413 245 aa1.79□□□□□ -2.12
SP3-205ENST00000465379 CCDC168Q8NDH2 2452 aa1.79□□□□□ -2.12
SP3-205ENST00000465379 SPTAN1Q13813 2472 aaKnown RBP1.79□□□□□ -2.12
SP3-205ENST00000465379 CSMD1Q96PZ7 3565 aa1.79□□□□□ -2.12
SP3-205ENST00000465379 FAT3Q8TDW7 4589 aa1.78□□□□□ -2.12
SP3-205ENST00000465379 NOTCH2Q04721 2471 aa1.78□□□□□ -2.13
SP3-205ENST00000465379 DMDP11532 3685 aa1.77□□□□□ -2.13
SP3-205ENST00000465379 WDFY3Q8IZQ1 3526 aa1.77□□□□□ -2.13
SP3-205ENST00000465379 INE1O15225 51 aa1.76□□□□□ -2.13
SP3-205ENST00000465379 NCOR2Q9Y618 2525 aa1.76□□□□□ -2.13
SP3-205ENST00000465379 ZNF462Q96JM2 2506 aa1.76□□□□□ -2.13
SP3-205ENST00000465379 MTORP42345 2549 aa1.75□□□□□ -2.13
SP3-205ENST00000465379 MUC4Q99102 2169 aa1.75□□□□□ -2.13
SP3-205ENST00000465379 HUWE1Q7Z6Z7 4374 aaKnown RBP1.74□□□□□ -2.13
SP3-205ENST00000465379 SRCAPQ6ZRS2 3230 aa1.74□□□□□ -2.13
SP3-205ENST00000465379 NOTCH3Q9UM47 2321 aa1.73□□□□□ -2.13
SP3-205ENST00000465379 MYO9AB2RTY4 2548 aa1.72□□□□□ -2.13
SP3-205ENST00000465379 MUC3AQ02505 3323 aa1.72□□□□□ -2.13
SP3-205ENST00000465379 SPRR2DP22532 72 aa1.72□□□□□ -2.13
SP3-205ENST00000465379 LRP2P98164 4655 aa1.72□□□□□ -2.13
SP3-205ENST00000465379 SPRR2EP22531 72 aa1.71□□□□□ -2.14
SP3-205ENST00000465379 SPRR2BP35325 72 aa1.71□□□□□ -2.14
SP3-205ENST00000465379 SPRR2AP35326 72 aa1.71□□□□□ -2.14
SP3-205ENST00000465379 CSMD3Q7Z407 3707 aa1.71□□□□□ -2.14
SP3-205ENST00000465379 BRCA2P51587 3418 aa1.7□□□□□ -2.14
SP3-205ENST00000465379 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
SP3-205ENST00000465379 SONP18583 2426 aaKnown RBP1.7□□□□□ -2.14
SP3-205ENST00000465379 HERC1Q15751 4861 aa1.7□□□□□ -2.14
SP3-205ENST00000465379 ACANP16112 2415 aa1.7□□□□□ -2.14
SP3-205ENST00000465379 MYO15AQ9UKN7 3530 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms