RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 TRBV20-1A0A075B6N2 111 aa10.32□□□□□ -0.76
CPSF4-209ENST00000465132 C9orf118A6NHY6 69 aa10.31□□□□□ -0.76
CPSF4-209ENST00000465132 TRACP01848 142 aa10.31□□□□□ -0.76
CPSF4-209ENST00000465132 TYMSOSQ8TAI1 123 aa10.31□□□□□ -0.76
CPSF4-209ENST00000465132 CLEC2BQ92478 149 aa10.31□□□□□ -0.76
CPSF4-209ENST00000465132 F8WEM9 126 aa10.3□□□□□ -0.76
CPSF4-209ENST00000465132 ATXN8Q156A1 80 aa10.3□□□□□ -0.76
CPSF4-209ENST00000465132 H3BUT2 72 aa10.29□□□□□ -0.76
CPSF4-209ENST00000465132 ANAPC11Q9NYG5 84 aa10.29□□□□□ -0.76
CPSF4-209ENST00000465132 LST1O00453 97 aa10.28□□□□□ -0.76
CPSF4-209ENST00000465132 FABP2P12104 132 aa10.28□□□□□ -0.76
CPSF4-209ENST00000465132 SSBP3-AS1Q7Z2R9 100 aa10.28□□□□□ -0.76
CPSF4-209ENST00000465132 FAM218AQ96MZ4 157 aa10.28□□□□□ -0.76
CPSF4-209ENST00000465132 ORMDL1Q9P0S3 153 aa10.28□□□□□ -0.76
CPSF4-209ENST00000465132 A0A087X002 238 aa10.27□□□□□ -0.77
CPSF4-209ENST00000465132 TAX1BP3O14907 124 aa10.27□□□□□ -0.77
CPSF4-209ENST00000465132 IGLV9-49A0A0B4J1Y8 123 aa10.26□□□□□ -0.77
CPSF4-209ENST00000465132 C9orf153Q5TBE3 101 aa10.26□□□□□ -0.77
CPSF4-209ENST00000465132 A0A1W2PPM0 123 aa10.25□□□□□ -0.77
CPSF4-209ENST00000465132 TMEM256-PLSCR3K7ERE1 68 aa10.25□□□□□ -0.77
CPSF4-209ENST00000465132 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
CPSF4-209ENST00000465132 Q8N377 158 aa10.25□□□□□ -0.77
CPSF4-209ENST00000465132 Q8NBF4 154 aa10.25□□□□□ -0.77
CPSF4-209ENST00000465132 LINC01547P58512 204 aaPredicted RBP10.24□□□□□ -0.77
CPSF4-209ENST00000465132 SPAG11AQ6PDA7 123 aa10.24□□□□□ -0.77
CPSF4-209ENST00000465132 NAA38Q9BRA0 125 aaKnown RBP10.24□□□□□ -0.77
CPSF4-209ENST00000465132 MOBPQ13875 183 aa10.22□□□□□ -0.77
CPSF4-209ENST00000465132 KRTAP13-2Q52LG2 175 aa10.22□□□□□ -0.77
CPSF4-209ENST00000465132 TCL1BO95988 128 aa10.2□□□□□ -0.78
CPSF4-209ENST00000465132 Q6JHZ5 121 aa10.2□□□□□ -0.78
CPSF4-209ENST00000465132 C3orf22Q8N5N4 141 aa10.2□□□□□ -0.78
CPSF4-209ENST00000465132 LINC00304Q8N9R0 145 aa10.2□□□□□ -0.78
CPSF4-209ENST00000465132 NDUFV3P56181 108 aaKnown RBP10.18□□□□□ -0.78
CPSF4-209ENST00000465132 SMIM29Q86T20 159 aa10.18□□□□□ -0.78
CPSF4-209ENST00000465132 UBE2V1Q13404 147 aa10.17□□□□□ -0.78
CPSF4-209ENST00000465132 PRR4Q16378 134 aa10.16□□□□□ -0.78
CPSF4-209ENST00000465132 MUC2Q02817 5179 aa10.15□□□□□ -0.78
CPSF4-209ENST00000465132 SPINK1P00995 79 aa10.15□□□□□ -0.78
CPSF4-209ENST00000465132 BAALC-AS2P0C853 105 aa10.15□□□□□ -0.78
CPSF4-209ENST00000465132 SPCS1Q9Y6A9 102 aa10.15□□□□□ -0.78
CPSF4-209ENST00000465132 IGLV8-61A0A075B6I0 122 aa10.14□□□□□ -0.79
CPSF4-209ENST00000465132 H3BMG7 143 aa10.13□□□□□ -0.79
CPSF4-209ENST00000465132 CD164Q04900 197 aa10.13□□□□□ -0.79
CPSF4-209ENST00000465132 GTF2H5Q6ZYL4 71 aa10.13□□□□□ -0.79
CPSF4-209ENST00000465132 C9JAW5 83 aa10.11□□□□□ -0.79
CPSF4-209ENST00000465132 RPS29P62273 56 aaKnown RBP10.11□□□□□ -0.79
CPSF4-209ENST00000465132 ANKRD29Q8N6D5 301 aa10.11□□□□□ -0.79
CPSF4-209ENST00000465132 JMJD7-PLA2G4BH0Y9G9 81 aa10.09□□□□□ -0.79
CPSF4-209ENST00000465132 H3BT86 120 aa10.09□□□□□ -0.79
CPSF4-209ENST00000465132 LIMD2Q9BT23 127 aa10.08□□□□□ -0.8
CPSF4-209ENST00000465132 K7EP34 96 aa10.07□□□□□ -0.8
CPSF4-209ENST00000465132 C21orf62-AS1Q17RA5 79 aa10.07□□□□□ -0.8
CPSF4-209ENST00000465132 RBM3P98179 157 aaKnown RBP10.06□□□□□ -0.8
CPSF4-209ENST00000465132 DSCR8Q96T75 97 aa10.05□□□□□ -0.8
CPSF4-209ENST00000465132 IGFL1Q6UW32 110 aa10.04□□□□□ -0.8
CPSF4-209ENST00000465132 PDE6GP18545 87 aa10.03□□□□□ -0.8
CPSF4-209ENST00000465132 A0A0U1RQV1 116 aa10.02□□□□□ -0.81
CPSF4-209ENST00000465132 Q6Q795 121 aa10.01□□□□□ -0.81
CPSF4-209ENST00000465132 TEN1Q86WV5 123 aa10.01□□□□□ -0.81
CPSF4-209ENST00000465132 HRCT1Q6UXD1 115 aa10□□□□□ -0.81
CPSF4-209ENST00000465132 SS18L2Q9UHA2 77 aa9.99□□□□□ -0.81
CPSF4-209ENST00000465132 Q5XG85 94 aa9.98□□□□□ -0.81
CPSF4-209ENST00000465132 F8W1H4 67 aa9.97□□□□□ -0.81
CPSF4-209ENST00000465132 TRBV7-4A0A0J9YYF1 115 aa9.96□□□□□ -0.82
CPSF4-209ENST00000465132 TRBV7-7A0A0K0K1E9 115 aa9.96□□□□□ -0.82
CPSF4-209ENST00000465132 A0A1B0GV72 72 aa9.95□□□□□ -0.82
CPSF4-209ENST00000465132 A0A1B0GW54 56 aa9.95□□□□□ -0.82
CPSF4-209ENST00000465132 CCKP06307 115 aa9.95□□□□□ -0.82
CPSF4-209ENST00000465132 LOC110117498A0A087WWA1 95 aa9.93□□□□□ -0.82
CPSF4-209ENST00000465132 FP248Q71RG6 208 aaPredicted RBP9.93□□□□□ -0.82
CPSF4-209ENST00000465132 KRTAP9-2Q9BYQ4 174 aa9.93□□□□□ -0.82
CPSF4-209ENST00000465132 MTURNQ8N3F0 131 aa9.92□□□□□ -0.82
CPSF4-209ENST00000465132 OBSCN-AS1Q96MR7 158 aa9.92□□□□□ -0.82
CPSF4-209ENST00000465132 FAT4Q6V0I7 4981 aa9.91□□□□□ -0.82
CPSF4-209ENST00000465132 A0A0G2JQZ4 141 aa9.91□□□□□ -0.82
CPSF4-209ENST00000465132 ASB16-AS1Q495Z4 193 aa9.9□□□□□ -0.82
CPSF4-209ENST00000465132 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
CPSF4-209ENST00000465132 RETNLBQ9BQ08 111 aa9.9□□□□□ -0.82
CPSF4-209ENST00000465132 VPS25Q9BRG1 176 aa9.9□□□□□ -0.82
CPSF4-209ENST00000465132 A0A1W2PNM2 257 aa9.88□□□□□ -0.83
CPSF4-209ENST00000465132 C14orf132Q9NPU4 83 aa9.88□□□□□ -0.83
CPSF4-209ENST00000465132 PRO0461Q9UI25 63 aa9.88□□□□□ -0.83
CPSF4-209ENST00000465132 Q6ZQT0 140 aa9.87□□□□□ -0.83
CPSF4-209ENST00000465132 A0A087WSZ3 146 aa9.86□□□□□ -0.83
CPSF4-209ENST00000465132 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-209ENST00000465132 MUC17Q685J3 4493 aa9.84□□□□□ -0.83
CPSF4-209ENST00000465132 TPRXLQ17RH7 258 aa9.83□□□□□ -0.84
CPSF4-209ENST00000465132 CDIP1Q9H305 208 aa9.83□□□□□ -0.84
CPSF4-209ENST00000465132 IGLV7-46A0A075B6I9 117 aa9.82□□□□□ -0.84
CPSF4-209ENST00000465132 A0A1B0GV90 55 aa9.81□□□□□ -0.84
CPSF4-209ENST00000465132 C1orf195Q5TG92 126 aa9.79□□□□□ -0.84
CPSF4-209ENST00000465132 ETDBQ3ZM63 59 aa9.77□□□□□ -0.85
CPSF4-209ENST00000465132 J3KT08 172 aa9.74□□□□□ -0.85
CPSF4-209ENST00000465132 NREPQ16612 68 aa9.73□□□□□ -0.85
CPSF4-209ENST00000465132 KRTAP9-6A0A140TA67 174 aa9.69□□□□□ -0.86
CPSF4-209ENST00000465132 IGKV4-1P06312 121 aa9.68□□□□□ -0.86
CPSF4-209ENST00000465132 SIGMAR1Q99720 223 aa9.68□□□□□ -0.86
CPSF4-209ENST00000465132 LINC00472Q9H8W2 130 aa9.68□□□□□ -0.86
CPSF4-209ENST00000465132 UBL5Q9BZL1 73 aa9.67□□□□□ -0.86
CPSF4-209ENST00000465132 ACYP1P07311 99 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 144.2 ms