RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 TPRP12270 2363 aaKnown RBP0.77□□□□□ -2.29
USP25-207ENST00000464435 FRAS1Q86XX4 4008 aa0.77□□□□□ -2.29
USP25-207ENST00000464435 AGLP35573 1532 aa0.77□□□□□ -2.29
USP25-207ENST00000464435 CDC42BPAQ5VT25 1732 aa0.77□□□□□ -2.29
USP25-207ENST00000464435 C6orf48Q9UBA6 75 aa0.76□□□□□ -2.29
USP25-207ENST00000464435 MUC5BQ9HC84 5762 aaPredicted RBP0.76□□□□□ -2.29
USP25-207ENST00000464435 AKAP6Q13023 2319 aa0.76□□□□□ -2.29
USP25-207ENST00000464435 REV3LO60673 3130 aa0.75□□□□□ -2.29
USP25-207ENST00000464435 H0YGX0 51 aa0.75□□□□□ -2.29
USP25-207ENST00000464435 DEFB130BP0DP73 79 aa0.75□□□□□ -2.29
USP25-207ENST00000464435 DEFB130AP0DP74 79 aa0.75□□□□□ -2.29
USP25-207ENST00000464435 TMEM167BQ9NRX6 74 aa0.75□□□□□ -2.29
USP25-207ENST00000464435 TRANK1O15050 2925 aa0.74□□□□□ -2.29
USP25-207ENST00000464435 CHD6Q8TD26 2715 aa0.73□□□□□ -2.29
USP25-207ENST00000464435 IQGAP2Q13576 1575 aa0.73□□□□□ -2.29
USP25-207ENST00000464435 A0A1B0GUL6 1792 aa0.73□□□□□ -2.29
USP25-207ENST00000464435 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
USP25-207ENST00000464435 TENM4Q6N022 2769 aa0.72□□□□□ -2.29
USP25-207ENST00000464435 ATRQ13535 2644 aa0.71□□□□□ -2.3
USP25-207ENST00000464435 SPTA1P02549 2419 aa0.7□□□□□ -2.3
USP25-207ENST00000464435 ABCA2Q9BZC7 2435 aa0.7□□□□□ -2.3
USP25-207ENST00000464435 KNL1Q8NG31 2342 aa0.7□□□□□ -2.3
USP25-207ENST00000464435 VWFP04275 2813 aa0.7□□□□□ -2.3
USP25-207ENST00000464435 WNK2Q9Y3S1 2297 aa0.69□□□□□ -2.3
USP25-207ENST00000464435 DEFB135Q30KP9 77 aa0.69□□□□□ -2.3
USP25-207ENST00000464435 LINC00308Q8TCZ7 52 aa0.69□□□□□ -2.3
USP25-207ENST00000464435 UNC79Q9P2D8 2635 aa0.68□□□□□ -2.3
USP25-207ENST00000464435 H0YGG7 62 aa0.68□□□□□ -2.3
USP25-207ENST00000464435 M0R2T5 61 aa0.68□□□□□ -2.3
USP25-207ENST00000464435 RPS27P42677 84 aaKnown RBP0.68□□□□□ -2.3
USP25-207ENST00000464435 OTOGQ6ZRI0 2925 aa0.68□□□□□ -2.3
USP25-207ENST00000464435 RPS27LQ71UM5 84 aaKnown RBP0.68□□□□□ -2.3
USP25-207ENST00000464435 ABRACLQ9P1F3 81 aa0.68□□□□□ -2.3
USP25-207ENST00000464435 LMO7Q8WWI1 1683 aa0.68□□□□□ -2.3
USP25-207ENST00000464435 USP24Q9UPU5 2620 aa0.68□□□□□ -2.3
USP25-207ENST00000464435 TOMM5Q8N4H5 51 aa0.67□□□□□ -2.3
USP25-207ENST00000464435 IQGAP1P46940 1657 aa0.67□□□□□ -2.3
USP25-207ENST00000464435 FAM208AQ9UK61 1670 aaKnown RBP0.67□□□□□ -2.3
USP25-207ENST00000464435 PTPN13Q12923 2485 aa0.66□□□□□ -2.3
USP25-207ENST00000464435 WT1-ASQ06250 92 aa0.66□□□□□ -2.3
USP25-207ENST00000464435 DEFB106AQ8N104 65 aa0.66□□□□□ -2.3
USP25-207ENST00000464435 PDE4DIPQ5VU43 2346 aa0.66□□□□□ -2.3
USP25-207ENST00000464435 ALMS1Q8TCU4 4167 aa0.65□□□□□ -2.3
USP25-207ENST00000464435 SMIM27A0A1W2PRY6 76 aa0.65□□□□□ -2.31
USP25-207ENST00000464435 H3BUA1 57 aa0.65□□□□□ -2.31
USP25-207ENST00000464435 TIMM8BQ9Y5J9 83 aaPredicted RBP0.65□□□□□ -2.31
USP25-207ENST00000464435 IGF2RP11717 2491 aa0.64□□□□□ -2.31
USP25-207ENST00000464435 DDX60Q8IY21 1712 aaKnown RBP0.64□□□□□ -2.31
USP25-207ENST00000464435 NCOR1O75376 2440 aa0.64□□□□□ -2.31
USP25-207ENST00000464435 AKAP13Q12802 2813 aa0.64□□□□□ -2.31
USP25-207ENST00000464435 DSPP15924 2871 aaKnown RBP0.64□□□□□ -2.31
USP25-207ENST00000464435 CSPG4Q6UVK1 2322 aa0.64□□□□□ -2.31
USP25-207ENST00000464435 S4R3F8 94 aa0.63□□□□□ -2.31
USP25-207ENST00000464435 LINC01546A6NGU7 62 aa0.62□□□□□ -2.31
USP25-207ENST00000464435 PRLHP81277 87 aa0.62□□□□□ -2.31
USP25-207ENST00000464435 TNXBP22105 4242 aa0.61□□□□□ -2.31
USP25-207ENST00000464435 KRTAP21-1Q3LI58 79 aa0.61□□□□□ -2.31
USP25-207ENST00000464435 HECTD1Q9ULT8 2610 aa0.61□□□□□ -2.31
USP25-207ENST00000464435 KIF21BO75037 1637 aa0.6□□□□□ -2.31
USP25-207ENST00000464435 CREBBPQ92793 2442 aa0.6□□□□□ -2.31
USP25-207ENST00000464435 CHD8Q9HCK8 2581 aa0.59□□□□□ -2.31
USP25-207ENST00000464435 EP300Q09472 2414 aaPredicted RBP0.59□□□□□ -2.31
USP25-207ENST00000464435 MUC5ACP98088 5654 aa0.59□□□□□ -2.31
USP25-207ENST00000464435 NAV2Q8IVL1 2488 aa0.59□□□□□ -2.31
USP25-207ENST00000464435 PRM1P04553 51 aa0.59□□□□□ -2.31
USP25-207ENST00000464435 TOP2AP11388 1531 aaKnown RBP0.59□□□□□ -2.32
USP25-207ENST00000464435 PRKDCP78527 4128 aaKnown RBP0.58□□□□□ -2.32
USP25-207ENST00000464435 FAT2Q9NYQ8 4349 aa0.58□□□□□ -2.32
USP25-207ENST00000464435 PKD1L1Q8TDX9 2849 aa0.58□□□□□ -2.32
USP25-207ENST00000464435 BSNQ9UPA5 3926 aa0.57□□□□□ -2.32
USP25-207ENST00000464435 WFDC10BQ8IUB3 73 aa0.57□□□□□ -2.32
USP25-207ENST00000464435 PRRC2CQ9Y520 2896 aaKnown RBP0.57□□□□□ -2.32
USP25-207ENST00000464435 TFF3Q07654 80 aa0.56□□□□□ -2.32
USP25-207ENST00000464435 KAAG1Q9UBP8 84 aa0.56□□□□□ -2.32
USP25-207ENST00000464435 HUWE1Q7Z6Z7 4374 aaKnown RBP0.56□□□□□ -2.32
USP25-207ENST00000464435 NCOR2Q9Y618 2525 aa0.56□□□□□ -2.32
USP25-207ENST00000464435 SETXQ7Z333 2677 aaKnown RBP0.55□□□□□ -2.32
USP25-207ENST00000464435 NFAT5O94916 1531 aa0.55□□□□□ -2.32
USP25-207ENST00000464435 CEP290O15078 2479 aa0.55□□□□□ -2.32
USP25-207ENST00000464435 SMIM2Q9BVW6 85 aa0.55□□□□□ -2.32
USP25-207ENST00000464435 NOP10Q9NPE3 64 aaKnown RBP0.55□□□□□ -2.32
USP25-207ENST00000464435 MAP1BP46821 2468 aaKnown RBP0.55□□□□□ -2.32
USP25-207ENST00000464435 UBR5O95071 2799 aaPredicted RBP0.54□□□□□ -2.32
USP25-207ENST00000464435 HIVEP3Q5T1R4 2406 aa0.54□□□□□ -2.32
USP25-207ENST00000464435 ATP7AQ04656 1500 aa0.54□□□□□ -2.32
USP25-207ENST00000464435 PCNX1Q96RV3 2341 aa0.53□□□□□ -2.33
USP25-207ENST00000464435 KMT2AQ03164 3969 aa0.52□□□□□ -2.33
USP25-207ENST00000464435 CLTCL1P53675 1640 aa0.52□□□□□ -2.33
USP25-207ENST00000464435 CACNA1AO00555 2505 aa0.52□□□□□ -2.33
USP25-207ENST00000464435 TNRC18O15417 2968 aaPredicted RBP0.51□□□□□ -2.33
USP25-207ENST00000464435 TRPM2O94759 1503 aa0.51□□□□□ -2.33
USP25-207ENST00000464435 SPRR2DP22532 72 aa0.51□□□□□ -2.33
USP25-207ENST00000464435 IGSF10Q6WRI0 2623 aa0.51□□□□□ -2.33
USP25-207ENST00000464435 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
USP25-207ENST00000464435 PHGR1C9JFL3 82 aa0.5□□□□□ -2.33
USP25-207ENST00000464435 KMT2DO14686 5537 aa0.5□□□□□ -2.33
USP25-207ENST00000464435 LRP1Q07954 4544 aaKnown RBP0.49□□□□□ -2.33
USP25-207ENST00000464435 NSD1Q96L73 2696 aaPredicted RBP0.49□□□□□ -2.33
USP25-207ENST00000464435 IGLV5-48A0A075B6I7 105 aa0.49□□□□□ -2.33
USP25-207ENST00000464435 C9orf92A6NGG3 77 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 114.7 ms