RNA–Protein interactions for RNA: ENST00000463048.3

NUP43-205, Transcript of nucleoporin 43, humanhuman

TSL 3

Gene NUP43, Length 523 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-205ENST00000463048 COX6CP09669 75 aa11.73□□□□□ -0.53
NUP43-205ENST00000463048 SSBP3-AS1Q7Z2R9 100 aa11.73□□□□□ -0.53
NUP43-205ENST00000463048 SCGB1C2P0DMR2 95 aa11.72□□□□□ -0.53
NUP43-205ENST00000463048 HRCT1Q6UXD1 115 aa11.69□□□□□ -0.54
NUP43-205ENST00000463048 A0A0G2JQZ4 141 aa11.68□□□□□ -0.54
NUP43-205ENST00000463048 SPAG11AQ6PDA7 123 aa11.68□□□□□ -0.54
NUP43-205ENST00000463048 RETNLBQ9BQ08 111 aa11.68□□□□□ -0.54
NUP43-205ENST00000463048 F8WEM9 126 aa11.67□□□□□ -0.54
NUP43-205ENST00000463048 SNHG12Q9BXW3 62 aa11.66□□□□□ -0.54
NUP43-205ENST00000463048 A0A1B0GX51 115 aa11.65□□□□□ -0.54
NUP43-205ENST00000463048 DNAL4O96015 105 aa11.64□□□□□ -0.55
NUP43-205ENST00000463048 PRR4Q16378 134 aa11.64□□□□□ -0.55
NUP43-205ENST00000463048 PCP4L1A6NKN8 68 aa11.63□□□□□ -0.55
NUP43-205ENST00000463048 FABP2P12104 132 aa11.63□□□□□ -0.55
NUP43-205ENST00000463048 OCIAD2Q56VL3 154 aa11.62□□□□□ -0.55
NUP43-205ENST00000463048 SPINK1P00995 79 aa11.61□□□□□ -0.55
NUP43-205ENST00000463048 PPDPFLQ8WWR9 84 aa11.61□□□□□ -0.55
NUP43-205ENST00000463048 HMCN2Q8NDA2 5059 aa11.61□□□□□ -0.55
NUP43-205ENST00000463048 H3BUT2 72 aa11.59□□□□□ -0.55
NUP43-205ENST00000463048 ORMDL1Q9P0S3 153 aa11.59□□□□□ -0.55
NUP43-205ENST00000463048 LST1O00453 97 aa11.58□□□□□ -0.56
NUP43-205ENST00000463048 A0A1B0GV72 72 aa11.57□□□□□ -0.56
NUP43-205ENST00000463048 NDUFV3P56181 108 aaKnown RBP11.57□□□□□ -0.56
NUP43-205ENST00000463048 TCL1BO95988 128 aa11.56□□□□□ -0.56
NUP43-205ENST00000463048 TAX1BP3O14907 124 aa11.55□□□□□ -0.56
NUP43-205ENST00000463048 TRACP01848 142 aa11.55□□□□□ -0.56
NUP43-205ENST00000463048 GHRHP01286 108 aa11.54□□□□□ -0.56
NUP43-205ENST00000463048 IGFL1Q6UW32 110 aa11.54□□□□□ -0.56
NUP43-205ENST00000463048 C9orf118A6NHY6 69 aa11.52□□□□□ -0.57
NUP43-205ENST00000463048 ATXN8Q156A1 80 aa11.52□□□□□ -0.57
NUP43-205ENST00000463048 IGLV8-61A0A075B6I0 122 aa11.51□□□□□ -0.57
NUP43-205ENST00000463048 H3BMG7 143 aa11.51□□□□□ -0.57
NUP43-205ENST00000463048 Q6JHZ5 121 aa11.51□□□□□ -0.57
NUP43-205ENST00000463048 RPS29P62273 56 aaKnown RBP11.49□□□□□ -0.57
NUP43-205ENST00000463048 CD164Q04900 197 aa11.49□□□□□ -0.57
NUP43-205ENST00000463048 LYRM7Q5U5X0 104 aa11.49□□□□□ -0.57
NUP43-205ENST00000463048 TMEM256-PLSCR3K7ERE1 68 aa11.48□□□□□ -0.57
NUP43-205ENST00000463048 LIMD2Q9BT23 127 aa11.48□□□□□ -0.57
NUP43-205ENST00000463048 BAALC-AS2P0C853 105 aa11.47□□□□□ -0.57
NUP43-205ENST00000463048 IGLV7-46A0A075B6I9 117 aa11.46□□□□□ -0.57
NUP43-205ENST00000463048 A0A1W2PPM0 123 aa11.46□□□□□ -0.57
NUP43-205ENST00000463048 H3BQ85 93 aa11.46□□□□□ -0.57
NUP43-205ENST00000463048 COL5A1-AS1Q5SY13 56 aa11.45□□□□□ -0.58
NUP43-205ENST00000463048 LPAP08519 4548 aa11.43□□□□□ -0.58
NUP43-205ENST00000463048 TRBV20-1A0A075B6N2 111 aa11.42□□□□□ -0.58
NUP43-205ENST00000463048 ANKRD29Q8N6D5 301 aa11.42□□□□□ -0.58
NUP43-205ENST00000463048 UBE2V1Q13404 147 aa11.41□□□□□ -0.58
NUP43-205ENST00000463048 TRBV7-7A0A0K0K1E9 115 aa11.4□□□□□ -0.58
NUP43-205ENST00000463048 C9JAW5 83 aa11.4□□□□□ -0.58
NUP43-205ENST00000463048 FP248Q71RG6 208 aaPredicted RBP11.38□□□□□ -0.59
NUP43-205ENST00000463048 MTURNQ8N3F0 131 aa11.38□□□□□ -0.59
NUP43-205ENST00000463048 SPCS1Q9Y6A9 102 aa11.36□□□□□ -0.59
NUP43-205ENST00000463048 LRP2P98164 4655 aa11.35□□□□□ -0.59
NUP43-205ENST00000463048 A0A1W2PNM2 257 aa11.34□□□□□ -0.59
NUP43-205ENST00000463048 TEN1Q86WV5 123 aa11.34□□□□□ -0.59
NUP43-205ENST00000463048 RBM3P98179 157 aaKnown RBP11.33□□□□□ -0.6
NUP43-205ENST00000463048 C1orf195Q5TG92 126 aa11.33□□□□□ -0.6
NUP43-205ENST00000463048 Q5XG85 94 aa11.33□□□□□ -0.6
NUP43-205ENST00000463048 VPS25Q9BRG1 176 aa11.32□□□□□ -0.6
NUP43-205ENST00000463048 A0A087WSZ3 146 aa11.31□□□□□ -0.6
NUP43-205ENST00000463048 CCKP06307 115 aa11.3□□□□□ -0.6
NUP43-205ENST00000463048 Q6Q795 121 aa11.3□□□□□ -0.6
NUP43-205ENST00000463048 DSCR8Q96T75 97 aa11.3□□□□□ -0.6
NUP43-205ENST00000463048 CDIP1Q9H305 208 aa11.3□□□□□ -0.6
NUP43-205ENST00000463048 TPRXLQ17RH7 258 aa11.29□□□□□ -0.6
NUP43-205ENST00000463048 TRBV7-4A0A0J9YYF1 115 aa11.27□□□□□ -0.61
NUP43-205ENST00000463048 KRTAP13-3Q3SY46 172 aa11.27□□□□□ -0.61
NUP43-205ENST00000463048 SS18L2Q9UHA2 77 aa11.25□□□□□ -0.61
NUP43-205ENST00000463048 C9orf92A6NGG3 77 aa11.24□□□□□ -0.61
NUP43-205ENST00000463048 JMJD7-PLA2G4BH0Y9G9 81 aa11.23□□□□□ -0.61
NUP43-205ENST00000463048 H3BT86 120 aa11.23□□□□□ -0.61
NUP43-205ENST00000463048 K7EP34 96 aa11.23□□□□□ -0.61
NUP43-205ENST00000463048 ASB16-AS1Q495Z4 193 aa11.23□□□□□ -0.61
NUP43-205ENST00000463048 C14orf132Q9NPU4 83 aa11.23□□□□□ -0.61
NUP43-205ENST00000463048 UBR4Q5T4S7 5183 aa11.23□□□□□ -0.61
NUP43-205ENST00000463048 SMCPP49901 116 aaPredicted RBP11.17□□□□□ -0.62
NUP43-205ENST00000463048 Q6ZQT0 140 aa11.17□□□□□ -0.62
NUP43-205ENST00000463048 OBSCN-AS1Q96MR7 158 aa11.16□□□□□ -0.62
NUP43-205ENST00000463048 LOC110117498A0A087WWA1 95 aa11.15□□□□□ -0.62
NUP43-205ENST00000463048 GTF2H5Q6ZYL4 71 aa11.15□□□□□ -0.62
NUP43-205ENST00000463048 DEFB116Q30KQ4 102 aa11.14□□□□□ -0.63
NUP43-205ENST00000463048 Q96NJ1 140 aa11.14□□□□□ -0.63
NUP43-205ENST00000463048 PRO0461Q9UI25 63 aa11.12□□□□□ -0.63
NUP43-205ENST00000463048 XP32Q5T750 250 aa11.11□□□□□ -0.63
NUP43-205ENST00000463048 SIGMAR1Q99720 223 aa11.11□□□□□ -0.63
NUP43-205ENST00000463048 PDE6GP18545 87 aa11.1□□□□□ -0.63
NUP43-205ENST00000463048 IGKV4-1P06312 121 aa11.08□□□□□ -0.64
NUP43-205ENST00000463048 LINC00472Q9H8W2 130 aa11.05□□□□□ -0.64
NUP43-205ENST00000463048 C21orf62-AS1Q17RA5 79 aa11.01□□□□□ -0.65
NUP43-205ENST00000463048 RNF213Q63HN8 5207 aa11□□□□□ -0.65
NUP43-205ENST00000463048 MUC17Q685J3 4493 aa10.99□□□□□ -0.65
NUP43-205ENST00000463048 F8W1H4 67 aa10.99□□□□□ -0.65
NUP43-205ENST00000463048 DSCR10P59022 87 aa10.99□□□□□ -0.65
NUP43-205ENST00000463048 A0A1B0GW54 56 aa10.97□□□□□ -0.65
NUP43-205ENST00000463048 A0A1B0GV90 55 aa10.96□□□□□ -0.65
NUP43-205ENST00000463048 SEC61BP60468 96 aaKnown RBP10.96□□□□□ -0.65
NUP43-205ENST00000463048 NREPQ16612 68 aa10.96□□□□□ -0.65
NUP43-205ENST00000463048 IGHV6-1A0A0B4J1U7 121 aa10.95□□□□□ -0.66
NUP43-205ENST00000463048 ETDBQ3ZM63 59 aa10.95□□□□□ -0.66
NUP43-205ENST00000463048 PCOTHQ58A44 107 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms