RNA–Protein interactions for RNA: ENST00000463004.5

RBM39-223, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 4,580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-223ENST00000463004 Q8NDZ9 215 aa7.33□□□□□ -1.24
RBM39-223ENST00000463004 HRNRQ86YZ3 2850 aaPredicted RBP7.32□□□□□ -1.24
RBM39-223ENST00000463004 RPS28P62857 69 aaKnown RBP7.31□□□□□ -1.24
RBM39-223ENST00000463004 PCOTHQ58A44 107 aa7.31□□□□□ -1.24
RBM39-223ENST00000463004 DNAH14Q0VDD8 3507 aa7.31□□□□□ -1.24
RBM39-223ENST00000463004 PRR4Q16378 134 aa7.31□□□□□ -1.24
RBM39-223ENST00000463004 NBEAQ8NFP9 2946 aa7.3□□□□□ -1.24
RBM39-223ENST00000463004 ACYP2P14621 99 aa7.29□□□□□ -1.24
RBM39-223ENST00000463004 LRBAP50851 2863 aa7.29□□□□□ -1.24
RBM39-223ENST00000463004 FREM2Q5SZK8 3169 aa7.29□□□□□ -1.24
RBM39-223ENST00000463004 K7ERS5 55 aa7.28□□□□□ -1.24
RBM39-223ENST00000463004 MPLKIPQ8TAP9 179 aa7.28□□□□□ -1.24
RBM39-223ENST00000463004 KLKP1Q107X0 134 aa7.28□□□□□ -1.24
RBM39-223ENST00000463004 IGKV2D-30A0A075B6S6 120 aa7.27□□□□□ -1.25
RBM39-223ENST00000463004 IGKV2-30P06310 120 aa7.27□□□□□ -1.25
RBM39-223ENST00000463004 Q96NJ1 140 aa7.27□□□□□ -1.25
RBM39-223ENST00000463004 CELSR3Q9NYQ7 3312 aa7.25□□□□□ -1.25
RBM39-223ENST00000463004 ATP11AUNQ6ZP68 121 aa7.25□□□□□ -1.25
RBM39-223ENST00000463004 KRTAP4-16G5E9R7 235 aaPredicted RBP7.25□□□□□ -1.25
RBM39-223ENST00000463004 SMR3BP02814 79 aaPredicted RBP7.25□□□□□ -1.25
RBM39-223ENST00000463004 Q6ZRN7 208 aaPredicted RBP7.25□□□□□ -1.25
RBM39-223ENST00000463004 ZZEF1O43149 2961 aa7.24□□□□□ -1.25
RBM39-223ENST00000463004 RETNLBQ9BQ08 111 aa7.23□□□□□ -1.25
RBM39-223ENST00000463004 J3QL48 77 aa7.22□□□□□ -1.25
RBM39-223ENST00000463004 LINC00483Q53H64 154 aa7.22□□□□□ -1.25
RBM39-223ENST00000463004 ANAPC11Q9NYG5 84 aa7.22□□□□□ -1.25
RBM39-223ENST00000463004 USP34Q70CQ2 3546 aa7.21□□□□□ -1.26
RBM39-223ENST00000463004 NIPBLQ6KC79 2804 aaeCLIP7.2□□□□□ -1.269e-8■□□□□ 8.9
RBM39-223ENST00000463004 BRK1Q8WUW1 75 aa7.2□□□□□ -1.26
RBM39-223ENST00000463004 C7orf65Q6ZTY9 151 aa7.2□□□□□ -1.26
RBM39-223ENST00000463004 DSCR10P59022 87 aa7.19□□□□□ -1.26
RBM39-223ENST00000463004 A6NED7 52 aa7.18□□□□□ -1.26
RBM39-223ENST00000463004 NBEAL2Q6ZNJ1 2754 aa7.18□□□□□ -1.26
RBM39-223ENST00000463004 A0A0G2JQZ4 141 aa7.18□□□□□ -1.26
RBM39-223ENST00000463004 ZANQ9Y493 2812 aa7.18□□□□□ -1.26
RBM39-223ENST00000463004 KRTAP10-1P60331 282 aa7.16□□□□□ -1.26
RBM39-223ENST00000463004 SPANXA2-OT1Q8N9U9 137 aa7.16□□□□□ -1.26
RBM39-223ENST00000463004 C1orf195Q5TG92 126 aa7.15□□□□□ -1.26
RBM39-223ENST00000463004 TACC2O95359 2948 aa7.15□□□□□ -1.26
RBM39-223ENST00000463004 KRTAP10-2P60368 255 aa7.14□□□□□ -1.27
RBM39-223ENST00000463004 OCR1Q9BZK8 76 aa7.13□□□□□ -1.27
RBM39-223ENST00000463004 A0A0U1RQV1 116 aa7.13□□□□□ -1.27
RBM39-223ENST00000463004 LINC00472Q9H8W2 130 aa7.13□□□□□ -1.27
RBM39-223ENST00000463004 LOC400499M0QZD8 3231 aa7.11□□□□□ -1.27
RBM39-223ENST00000463004 PRR26Q8N8Z3 221 aa7.11□□□□□ -1.27
RBM39-223ENST00000463004 NBEAL1Q6ZS30 2694 aa7.1□□□□□ -1.27
RBM39-223ENST00000463004 H7BZZ5 65 aa7.09□□□□□ -1.27
RBM39-223ENST00000463004 TENM4Q6N022 2769 aa7.07□□□□□ -1.28
RBM39-223ENST00000463004 MMP24-AS1A0A0U1RRL7 71 aa7.07□□□□□ -1.28
RBM39-223ENST00000463004 PANO1I0J062 215 aa7.06□□□□□ -1.28
RBM39-223ENST00000463004 A0A1B0GU69 56 aa7.06□□□□□ -1.28
RBM39-223ENST00000463004 CELSR2Q9HCU4 2923 aa7.05□□□□□ -1.28
RBM39-223ENST00000463004 RPS29P62273 56 aaKnown RBP7.05□□□□□ -1.28
RBM39-223ENST00000463004 ASB16-AS1Q495Z4 193 aa7.05□□□□□ -1.28
RBM39-223ENST00000463004 PDZD2O15018 2839 aa7.04□□□□□ -1.28
RBM39-223ENST00000463004 COA5Q86WW8 74 aa7.03□□□□□ -1.28
RBM39-223ENST00000463004 FBN2P35556 2912 aa7.03□□□□□ -1.28
RBM39-223ENST00000463004 KRTAP13-1Q8IUC0 172 aa7.02□□□□□ -1.29
RBM39-223ENST00000463004 KRTAP7-1Q8IUC3 87 aa7.02□□□□□ -1.29
RBM39-223ENST00000463004 IGLV7-46A0A075B6I9 117 aa7.02□□□□□ -1.29
RBM39-223ENST00000463004 C9orf92A6NGG3 77 aa7.02□□□□□ -1.29
RBM39-223ENST00000463004 A8MUN3 132 aa7.01□□□□□ -1.29
RBM39-223ENST00000463004 CYP4F30PQ9H0H9 118 aa7.01□□□□□ -1.29
RBM39-223ENST00000463004 Q5VSD8 79 aa7□□□□□ -1.29
RBM39-223ENST00000463004 FP248Q71RG6 208 aaPredicted RBP7□□□□□ -1.29
RBM39-223ENST00000463004 PSPHP1O15172 72 aa7□□□□□ -1.29
RBM39-223ENST00000463004 Q5XG85 94 aa6.98□□□□□ -1.29
RBM39-223ENST00000463004 RBM12B-AS1Q9P1G2 102 aa6.98□□□□□ -1.29
RBM39-223ENST00000463004 SPEGQ15772 3267 aa6.97□□□□□ -1.29
RBM39-223ENST00000463004 ZCCHC13Q8WW36 166 aaKnown RBP6.96□□□□□ -1.29
RBM39-223ENST00000463004 MXRA5Q9NR99 2828 aa6.96□□□□□ -1.3
RBM39-223ENST00000463004 STAB2Q8WWQ8 2551 aa6.96□□□□□ -1.3
RBM39-223ENST00000463004 ASH1LQ9NR48 2969 aaKnown RBP6.95□□□□□ -1.3
RBM39-223ENST00000463004 Q6ZSA8 131 aa6.93□□□□□ -1.3
RBM39-223ENST00000463004 CRYBG3Q68DQ2 2970 aa6.93□□□□□ -1.3
RBM39-223ENST00000463004 DCHS2Q6V1P9 2916 aa6.93□□□□□ -1.3
RBM39-223ENST00000463004 KRTAP11-1Q8IUC1 163 aa6.93□□□□□ -1.3
RBM39-223ENST00000463004 NF1P21359 2839 aa6.92□□□□□ -1.3
RBM39-223ENST00000463004 MYO15AQ9UKN7 3530 aa6.9□□□□□ -1.31
RBM39-223ENST00000463004 PRO0628Q9UI54 55 aa6.89□□□□□ -1.31
RBM39-223ENST00000463004 KRTAP29-1A8MX34 341 aaPredicted RBP6.89□□□□□ -1.31
RBM39-223ENST00000463004 PMAIP1Q13794 54 aa6.88□□□□□ -1.31
RBM39-223ENST00000463004 A0A087X002 238 aa6.87□□□□□ -1.31
RBM39-223ENST00000463004 OXTP01178 125 aa6.87□□□□□ -1.31
RBM39-223ENST00000463004 UQCR11O14957 56 aa6.87□□□□□ -1.31
RBM39-223ENST00000463004 COX6B2Q6YFQ2 88 aa6.87□□□□□ -1.31
RBM39-223ENST00000463004 HRES1P13985 223 aa6.85□□□□□ -1.31
RBM39-223ENST00000463004 Q5W150 140 aa6.85□□□□□ -1.31
RBM39-223ENST00000463004 SEC61BP60468 96 aaKnown RBP6.84□□□□□ -1.31
RBM39-223ENST00000463004 CFAP47Q6ZTR5 3102 aa6.82□□□□□ -1.32
RBM39-223ENST00000463004 C4orf26Q17RF5 130 aa6.81□□□□□ -1.32
RBM39-223ENST00000463004 DCHS1Q96JQ0 3298 aa6.8□□□□□ -1.32
RBM39-223ENST00000463004 OTOGQ6ZRI0 2925 aa6.8□□□□□ -1.32
RBM39-223ENST00000463004 Q1T7F1 81 aa6.79□□□□□ -1.32
RBM39-223ENST00000463004 KRTAP13-2Q52LG2 175 aa6.79□□□□□ -1.32
RBM39-223ENST00000463004 Q8N1X5 172 aa6.77□□□□□ -1.33
RBM39-223ENST00000463004 MUC3AQ02505 3323 aa6.76□□□□□ -1.33
RBM39-223ENST00000463004 SPINK7P58062 85 aa6.76□□□□□ -1.33
RBM39-223ENST00000463004 Q8N9P0 234 aaPredicted RBP6.76□□□□□ -1.33
RBM39-223ENST00000463004 MIR22HGQ0VDD5 57 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms