RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 A0A0B4J2C4 111 aa5.08□□□□□ -1.6
LDB1-203ENST00000461873 A0A1B0GWB2 263 aa5.08□□□□□ -1.6
LDB1-203ENST00000461873 SLC25A20O43772 301 aa5.08□□□□□ -1.6
LDB1-203ENST00000461873 LAMTOR3Q9UHA4 124 aa5.08□□□□□ -1.6
LDB1-203ENST00000461873 H3BUT2 72 aa5.07□□□□□ -1.6
LDB1-203ENST00000461873 ERC2-IT1O76042 136 aa5.07□□□□□ -1.6
LDB1-203ENST00000461873 Q1RN00 199 aa5.07□□□□□ -1.6
LDB1-203ENST00000461873 Q9BRP9 147 aa5.07□□□□□ -1.6
LDB1-203ENST00000461873 TRAV13-2A0A0B4J235 113 aa5.06□□□□□ -1.6
LDB1-203ENST00000461873 COX7BP24311 80 aa5.06□□□□□ -1.6
LDB1-203ENST00000461873 RPS29P62273 56 aaKnown RBP5.06□□□□□ -1.6
LDB1-203ENST00000461873 SMIM11BQ8TCY0 68 aa5.06□□□□□ -1.6
LDB1-203ENST00000461873 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
LDB1-203ENST00000461873 A0A1B0GV90 55 aa5.05□□□□□ -1.6
LDB1-203ENST00000461873 C9orf118A6NHY6 69 aa5.05□□□□□ -1.6
LDB1-203ENST00000461873 PSMB2P49721 201 aa5.05□□□□□ -1.6
LDB1-203ENST00000461873 MUC2Q02817 5179 aa5.05□□□□□ -1.6
LDB1-203ENST00000461873 SEC61BP60468 96 aaKnown RBP5.04□□□□□ -1.6
LDB1-203ENST00000461873 C6orf99Q4VX62 202 aa5.04□□□□□ -1.6
LDB1-203ENST00000461873 ST20-AS1Q8NBB2 130 aa5.04□□□□□ -1.6
LDB1-203ENST00000461873 DEFB105AQ8NG35 78 aa5.04□□□□□ -1.6
LDB1-203ENST00000461873 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.03□□□□□ -1.6
LDB1-203ENST00000461873 TRIAP1O43715 76 aa5.03□□□□□ -1.6
LDB1-203ENST00000461873 SCGB1C2P0DMR2 95 aa5.03□□□□□ -1.6
LDB1-203ENST00000461873 HRCT1Q6UXD1 115 aa5.03□□□□□ -1.6
LDB1-203ENST00000461873 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
LDB1-203ENST00000461873 VAMP3Q15836 100 aa5.02□□□□□ -1.61
LDB1-203ENST00000461873 CLEC2BQ92478 149 aa5.02□□□□□ -1.61
LDB1-203ENST00000461873 TEX49A0A1B0GTD5 131 aa5.01□□□□□ -1.61
LDB1-203ENST00000461873 A0A1W2PPM0 123 aa5.01□□□□□ -1.61
LDB1-203ENST00000461873 ELOF1P60002 83 aaKnown RBP5.01□□□□□ -1.61
LDB1-203ENST00000461873 Q8N377 158 aa5.01□□□□□ -1.61
LDB1-203ENST00000461873 TRBV7-6A0A0J9YX20 115 aa5□□□□□ -1.61
LDB1-203ENST00000461873 KRTAP9-6A0A140TA67 174 aa5□□□□□ -1.61
LDB1-203ENST00000461873 KRTAP13-3Q3SY46 172 aa5□□□□□ -1.61
LDB1-203ENST00000461873 KRTAP4-12Q9BQ66 201 aa5□□□□□ -1.61
LDB1-203ENST00000461873 F8WEM9 126 aa4.99□□□□□ -1.61
LDB1-203ENST00000461873 TCL1BO95988 128 aa4.99□□□□□ -1.61
LDB1-203ENST00000461873 FABP2P12104 132 aa4.99□□□□□ -1.61
LDB1-203ENST00000461873 SPRR1BP22528 89 aa4.98□□□□□ -1.61
LDB1-203ENST00000461873 LINC01547P58512 204 aaPredicted RBP4.98□□□□□ -1.61
LDB1-203ENST00000461873 FAM218AQ96MZ4 157 aa4.98□□□□□ -1.61
LDB1-203ENST00000461873 SPCS1Q9Y6A9 102 aa4.98□□□□□ -1.61
LDB1-203ENST00000461873 COX6CP09669 75 aa4.97□□□□□ -1.61
LDB1-203ENST00000461873 ASB16-AS1Q495Z4 193 aa4.97□□□□□ -1.61
LDB1-203ENST00000461873 MTURNQ8N3F0 131 aa4.97□□□□□ -1.61
LDB1-203ENST00000461873 MUC17Q685J3 4493 aa4.97□□□□□ -1.61
LDB1-203ENST00000461873 H3BMG7 143 aa4.96□□□□□ -1.62
LDB1-203ENST00000461873 SNCGO76070 127 aa4.96□□□□□ -1.62
LDB1-203ENST00000461873 CD164Q04900 197 aa4.96□□□□□ -1.62
LDB1-203ENST00000461873 FAT4Q6V0I7 4981 aa4.95□□□□□ -1.62
LDB1-203ENST00000461873 K7EP34 96 aa4.95□□□□□ -1.62
LDB1-203ENST00000461873 LINC00575Q6W349 94 aa4.95□□□□□ -1.62
LDB1-203ENST00000461873 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
LDB1-203ENST00000461873 H0YGX0 51 aa4.94□□□□□ -1.62
LDB1-203ENST00000461873 C9orf92A6NGG3 77 aa4.93□□□□□ -1.62
LDB1-203ENST00000461873 C9JAW5 83 aa4.93□□□□□ -1.62
LDB1-203ENST00000461873 LST1O00453 97 aa4.93□□□□□ -1.62
LDB1-203ENST00000461873 ATXN8Q156A1 80 aa4.93□□□□□ -1.62
LDB1-203ENST00000461873 LYRM7Q5U5X0 104 aa4.93□□□□□ -1.62
LDB1-203ENST00000461873 TRBV20-1A0A075B6N2 111 aa4.92□□□□□ -1.62
LDB1-203ENST00000461873 hADV29S1A0JD25 119 aa4.92□□□□□ -1.62
LDB1-203ENST00000461873 UBE2V1Q13404 147 aa4.92□□□□□ -1.62
LDB1-203ENST00000461873 GTF2H5Q6ZYL4 71 aa4.92□□□□□ -1.62
LDB1-203ENST00000461873 IGLV5-48A0A075B6I7 105 aa4.91□□□□□ -1.62
LDB1-203ENST00000461873 BAALC-AS2P0C853 105 aa4.9□□□□□ -1.63
LDB1-203ENST00000461873 Q6ZQY7 126 aa4.9□□□□□ -1.63
LDB1-203ENST00000461873 TRACP01848 142 aa4.89□□□□□ -1.63
LDB1-203ENST00000461873 Q6JHZ5 121 aa4.89□□□□□ -1.63
LDB1-203ENST00000461873 IGLV8-61A0A075B6I0 122 aa4.88□□□□□ -1.63
LDB1-203ENST00000461873 A0A1B0GV72 72 aa4.88□□□□□ -1.63
LDB1-203ENST00000461873 H3BS24 57 aa4.88□□□□□ -1.63
LDB1-203ENST00000461873 DNAL4O96015 105 aa4.88□□□□□ -1.63
LDB1-203ENST00000461873 PRO0461Q9UI25 63 aa4.88□□□□□ -1.63
LDB1-203ENST00000461873 A0A1B0GX51 115 aa4.87□□□□□ -1.63
LDB1-203ENST00000461873 PCOTHQ58A44 107 aa4.87□□□□□ -1.63
LDB1-203ENST00000461873 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
LDB1-203ENST00000461873 Q5XG85 94 aa4.87□□□□□ -1.63
LDB1-203ENST00000461873 SMIM29Q86T20 159 aa4.87□□□□□ -1.63
LDB1-203ENST00000461873 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.86□□□□□ -1.63
LDB1-203ENST00000461873 PPDPFLQ8WWR9 84 aa4.86□□□□□ -1.63
LDB1-203ENST00000461873 ORMDL1Q9P0S3 153 aa4.86□□□□□ -1.63
LDB1-203ENST00000461873 C1orf195Q5TG92 126 aa4.85□□□□□ -1.63
LDB1-203ENST00000461873 ANKRD29Q8N6D5 301 aa4.85□□□□□ -1.63
LDB1-203ENST00000461873 A0A0G2JQZ4 141 aa4.84□□□□□ -1.63
LDB1-203ENST00000461873 F8W1H4 67 aa4.84□□□□□ -1.63
LDB1-203ENST00000461873 OCIAD2Q56VL3 154 aa4.84□□□□□ -1.63
LDB1-203ENST00000461873 ETDBQ3ZM63 59 aa4.83□□□□□ -1.64
LDB1-203ENST00000461873 TRBV7-7A0A0K0K1E9 115 aa4.82□□□□□ -1.64
LDB1-203ENST00000461873 H3BT86 120 aa4.82□□□□□ -1.64
LDB1-203ENST00000461873 TMEM256-PLSCR3K7ERE1 68 aa4.82□□□□□ -1.64
LDB1-203ENST00000461873 NDUFV3P56181 108 aaKnown RBP4.82□□□□□ -1.64
LDB1-203ENST00000461873 COX6B2Q6YFQ2 88 aa4.82□□□□□ -1.64
LDB1-203ENST00000461873 SS18L2Q9UHA2 77 aa4.82□□□□□ -1.64
LDB1-203ENST00000461873 IGFL1Q6UW32 110 aa4.81□□□□□ -1.64
LDB1-203ENST00000461873 ATP11AUNQ6ZP68 121 aa4.81□□□□□ -1.64
LDB1-203ENST00000461873 RPL37P61927 97 aaKnown RBP4.8□□□□□ -1.64
LDB1-203ENST00000461873 KRTAP4-1Q9BYQ7 146 aa4.8□□□□□ -1.64
LDB1-203ENST00000461873 M0R2T5 61 aa4.79□□□□□ -1.64
LDB1-203ENST00000461873 KRTAP9-9Q9BYP9 154 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms