RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 C3P01024 1663 aa0.39□□□□□ -2.35
SPTLC1-203ENST00000461132 ABCA10Q8WWZ4 1543 aa0.38□□□□□ -2.35
SPTLC1-203ENST00000461132 SPRR2DP22532 72 aa0.38□□□□□ -2.35
SPTLC1-203ENST00000461132 IGSF10Q6WRI0 2623 aa0.38□□□□□ -2.35
SPTLC1-203ENST00000461132 ABCA6Q8N139 1617 aa0.38□□□□□ -2.35
SPTLC1-203ENST00000461132 M0R1W7 72 aa0.37□□□□□ -2.35
SPTLC1-203ENST00000461132 C6orf48Q9UBA6 75 aa0.37□□□□□ -2.35
SPTLC1-203ENST00000461132 PHGR1C9JFL3 82 aa0.36□□□□□ -2.35
SPTLC1-203ENST00000461132 WNK1Q9H4A3 2382 aa0.36□□□□□ -2.35
SPTLC1-203ENST00000461132 EEA1Q15075 1411 aa0.36□□□□□ -2.35
SPTLC1-203ENST00000461132 APC2O95996 2303 aa0.36□□□□□ -2.35
SPTLC1-203ENST00000461132 UBR5O95071 2799 aaPredicted RBP0.35□□□□□ -2.35
SPTLC1-203ENST00000461132 GPR98Q8WXG9 6306 aa0.35□□□□□ -2.35
SPTLC1-203ENST00000461132 CPS1P31327 1500 aa0.35□□□□□ -2.35
SPTLC1-203ENST00000461132 SYNE1Q8NF91 8797 aaKnown RBP0.35□□□□□ -2.35
SPTLC1-203ENST00000461132 DMBT1Q9UGM3 2413 aaPredicted RBP0.34□□□□□ -2.35
SPTLC1-203ENST00000461132 H3BUA1 57 aa0.33□□□□□ -2.36
SPTLC1-203ENST00000461132 PRLHP81277 87 aa0.33□□□□□ -2.36
SPTLC1-203ENST00000461132 WT1-ASQ06250 92 aa0.33□□□□□ -2.36
SPTLC1-203ENST00000461132 TMEM167BQ9NRX6 74 aa0.33□□□□□ -2.36
SPTLC1-203ENST00000461132 PRXQ9BXM0 1461 aa0.33□□□□□ -2.36
SPTLC1-203ENST00000461132 MAP1BP46821 2468 aaKnown RBP0.32□□□□□ -2.36
SPTLC1-203ENST00000461132 MUC5ACP98088 5654 aa0.32□□□□□ -2.36
SPTLC1-203ENST00000461132 CSMD3Q7Z407 3707 aa0.31□□□□□ -2.36
SPTLC1-203ENST00000461132 HRNRQ86YZ3 2850 aaPredicted RBP0.31□□□□□ -2.36
SPTLC1-203ENST00000461132 ALS2Q96Q42 1657 aa0.31□□□□□ -2.36
SPTLC1-203ENST00000461132 PKD1L1Q8TDX9 2849 aa0.31□□□□□ -2.36
SPTLC1-203ENST00000461132 SPRR2BP35325 72 aa0.31□□□□□ -2.36
SPTLC1-203ENST00000461132 DEFB106AQ8N104 65 aa0.31□□□□□ -2.36
SPTLC1-203ENST00000461132 TIMM8BQ9Y5J9 83 aaPredicted RBP0.31□□□□□ -2.36
SPTLC1-203ENST00000461132 H0YGX0 51 aa0.3□□□□□ -2.36
SPTLC1-203ENST00000461132 KIF1AQ12756 1690 aa0.3□□□□□ -2.36
SPTLC1-203ENST00000461132 LY75O60449 1722 aa0.3□□□□□ -2.36
SPTLC1-203ENST00000461132 PCNX1Q96RV3 2341 aa0.29□□□□□ -2.36
SPTLC1-203ENST00000461132 RPS27P42677 84 aaKnown RBP0.29□□□□□ -2.36
SPTLC1-203ENST00000461132 RPS27LQ71UM5 84 aaKnown RBP0.29□□□□□ -2.36
SPTLC1-203ENST00000461132 S4R3F8 94 aa0.29□□□□□ -2.36
SPTLC1-203ENST00000461132 MAST4O15021 2626 aa0.29□□□□□ -2.36
SPTLC1-203ENST00000461132 UGGT1Q9NYU2 1555 aa0.28□□□□□ -2.36
SPTLC1-203ENST00000461132 C9orf92A6NGG3 77 aa0.28□□□□□ -2.36
SPTLC1-203ENST00000461132 IGIPA6NJ69 53 aa0.28□□□□□ -2.36
SPTLC1-203ENST00000461132 ACANP16112 2415 aa0.28□□□□□ -2.36
SPTLC1-203ENST00000461132 CACNA1AO00555 2505 aa0.27□□□□□ -2.37
SPTLC1-203ENST00000461132 ABRACLQ9P1F3 81 aa0.27□□□□□ -2.37
SPTLC1-203ENST00000461132 GLI2P10070 1586 aa0.27□□□□□ -2.37
SPTLC1-203ENST00000461132 MAST1Q9Y2H9 1570 aa0.27□□□□□ -2.37
SPTLC1-203ENST00000461132 KMT2DO14686 5537 aa0.27□□□□□ -2.37
SPTLC1-203ENST00000461132 CLASP1Q7Z460 1538 aa0.26□□□□□ -2.37
SPTLC1-203ENST00000461132 ITSN2Q9NZM3 1697 aa0.25□□□□□ -2.37
SPTLC1-203ENST00000461132 H3BNG1 76 aa0.25□□□□□ -2.37
SPTLC1-203ENST00000461132 PLNP26678 52 aa0.25□□□□□ -2.37
SPTLC1-203ENST00000461132 REV3LO60673 3130 aa0.24□□□□□ -2.37
SPTLC1-203ENST00000461132 CELSR1Q9NYQ6 3014 aa0.24□□□□□ -2.37
SPTLC1-203ENST00000461132 CROCC2H7BZ55 1655 aa0.24□□□□□ -2.37
SPTLC1-203ENST00000461132 LINC00308Q8TCZ7 52 aa0.24□□□□□ -2.37
SPTLC1-203ENST00000461132 NBASA2RRP1 2371 aa0.23□□□□□ -2.37
SPTLC1-203ENST00000461132 NOP10Q9NPE3 64 aaKnown RBP0.23□□□□□ -2.37
SPTLC1-203ENST00000461132 ANKRD36CQ5JPF3 1778 aa0.23□□□□□ -2.37
SPTLC1-203ENST00000461132 FLNBO75369 2602 aaKnown RBP0.23□□□□□ -2.37
SPTLC1-203ENST00000461132 BPTFQ12830 3046 aa0.23□□□□□ -2.37
SPTLC1-203ENST00000461132 TRANK1O15050 2925 aa0.22□□□□□ -2.37
SPTLC1-203ENST00000461132 SPRR2GQ9BYE4 73 aa0.22□□□□□ -2.37
SPTLC1-203ENST00000461132 SETXQ7Z333 2677 aaKnown RBP0.22□□□□□ -2.37
SPTLC1-203ENST00000461132 CREBBPQ92793 2442 aa0.22□□□□□ -2.37
SPTLC1-203ENST00000461132 FAT4Q6V0I7 4981 aa0.22□□□□□ -2.37
SPTLC1-203ENST00000461132 MACF1Q9UPN3 7388 aaKnown RBP0.21□□□□□ -2.38
SPTLC1-203ENST00000461132 HECTD1Q9ULT8 2610 aa0.21□□□□□ -2.38
SPTLC1-203ENST00000461132 TNXBP22105 4242 aa0.21□□□□□ -2.38
SPTLC1-203ENST00000461132 CDC42BPAQ5VT25 1732 aa0.21□□□□□ -2.38
SPTLC1-203ENST00000461132 PREX2Q70Z35 1606 aa0.2□□□□□ -2.38
SPTLC1-203ENST00000461132 SYCP2Q9BX26 1530 aa0.2□□□□□ -2.38
SPTLC1-203ENST00000461132 LRP1Q07954 4544 aaKnown RBP0.2□□□□□ -2.38
SPTLC1-203ENST00000461132 SMIM27A0A1W2PRY6 76 aa0.2□□□□□ -2.38
SPTLC1-203ENST00000461132 CMC2Q9NRP2 79 aa0.2□□□□□ -2.38
SPTLC1-203ENST00000461132 ADCY10Q96PN6 1610 aa0.2□□□□□ -2.38
SPTLC1-203ENST00000461132 ANK2Q01484 3957 aa0.19□□□□□ -2.38
SPTLC1-203ENST00000461132 SPRR2AP35326 72 aa0.18□□□□□ -2.38
SPTLC1-203ENST00000461132 FLNCQ14315 2725 aa0.18□□□□□ -2.38
SPTLC1-203ENST00000461132 TOGARAM1Q9Y4F4 1720 aa0.18□□□□□ -2.38
SPTLC1-203ENST00000461132 SYNE2Q8WXH0 6885 aaKnown RBP0.18□□□□□ -2.38
SPTLC1-203ENST00000461132 COL7A1Q02388 2944 aa0.17□□□□□ -2.38
SPTLC1-203ENST00000461132 IGLV5-48A0A075B6I7 105 aa0.17□□□□□ -2.38
SPTLC1-203ENST00000461132 DSPP15924 2871 aaKnown RBP0.16□□□□□ -2.38
SPTLC1-203ENST00000461132 FSIP2Q5CZC0 6907 aa0.16□□□□□ -2.38
SPTLC1-203ENST00000461132 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
SPTLC1-203ENST00000461132 PKD1L2Q7Z442 2459 aa0.15□□□□□ -2.38
SPTLC1-203ENST00000461132 SNRPGP15A8MWD9 76 aa0.15□□□□□ -2.39
SPTLC1-203ENST00000461132 EFCAB6Q5THR3 1501 aa0.14□□□□□ -2.39
SPTLC1-203ENST00000461132 AKAP13Q12802 2813 aa0.14□□□□□ -2.39
SPTLC1-203ENST00000461132 DCHS2Q6V1P9 2916 aa0.14□□□□□ -2.39
SPTLC1-203ENST00000461132 AGLP35573 1532 aa0.13□□□□□ -2.39
SPTLC1-203ENST00000461132 SPTBN4Q9H254 2564 aa0.13□□□□□ -2.39
SPTLC1-203ENST00000461132 MMP24-AS1A0A0U1RRL7 71 aa0.13□□□□□ -2.39
SPTLC1-203ENST00000461132 FANCD2Q9BXW9 1451 aa0.13□□□□□ -2.39
SPTLC1-203ENST00000461132 CEP290O15078 2479 aa0.13□□□□□ -2.39
SPTLC1-203ENST00000461132 MYCBP2O75592 4640 aa0.13□□□□□ -2.39
SPTLC1-203ENST00000461132 NSD1Q96L73 2696 aaPredicted RBP0.12□□□□□ -2.39
SPTLC1-203ENST00000461132 ABCC8Q09428 1581 aa0.12□□□□□ -2.39
SPTLC1-203ENST00000461132 KAAG1Q9UBP8 84 aa0.12□□□□□ -2.39
SPTLC1-203ENST00000461132 ABCA5Q8WWZ7 1642 aa0.12□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms