RNA–Protein interactions for RNA: ENST00000460909.1

RPUSD3-210, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-210ENST00000460909 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.72□□□□□ -0.53
RPUSD3-210ENST00000460909 FAM218AQ96MZ4 157 aa11.72□□□□□ -0.53
RPUSD3-210ENST00000460909 TRIAP1O43715 76 aa11.68□□□□□ -0.54
RPUSD3-210ENST00000460909 IGLV7-46A0A075B6I9 117 aa11.65□□□□□ -0.54
RPUSD3-210ENST00000460909 PPDPFLQ8WWR9 84 aa11.65□□□□□ -0.54
RPUSD3-210ENST00000460909 A0A0G2JQZ4 141 aa11.64□□□□□ -0.55
RPUSD3-210ENST00000460909 CD164Q04900 197 aa11.64□□□□□ -0.55
RPUSD3-210ENST00000460909 FP248Q71RG6 208 aaPredicted RBP11.64□□□□□ -0.55
RPUSD3-210ENST00000460909 A0A1B0GX51 115 aa11.63□□□□□ -0.55
RPUSD3-210ENST00000460909 HRCT1Q6UXD1 115 aa11.63□□□□□ -0.55
RPUSD3-210ENST00000460909 SNCGO76070 127 aa11.62□□□□□ -0.55
RPUSD3-210ENST00000460909 IGLV8-61A0A075B6I0 122 aa11.61□□□□□ -0.55
RPUSD3-210ENST00000460909 OCIAD2Q56VL3 154 aa11.61□□□□□ -0.55
RPUSD3-210ENST00000460909 TPRXLQ17RH7 258 aa11.6□□□□□ -0.55
RPUSD3-210ENST00000460909 CLEC2BQ92478 149 aa11.6□□□□□ -0.55
RPUSD3-210ENST00000460909 F8WEM9 126 aa11.59□□□□□ -0.55
RPUSD3-210ENST00000460909 PSMB2P49721 201 aa11.59□□□□□ -0.55
RPUSD3-210ENST00000460909 LIMD2Q9BT23 127 aa11.57□□□□□ -0.56
RPUSD3-210ENST00000460909 TSTD3H0UI37 97 aa11.56□□□□□ -0.56
RPUSD3-210ENST00000460909 M0R143 59 aa11.56□□□□□ -0.56
RPUSD3-210ENST00000460909 SNHG12Q9BXW3 62 aa11.56□□□□□ -0.56
RPUSD3-210ENST00000460909 COX6CP09669 75 aa11.55□□□□□ -0.56
RPUSD3-210ENST00000460909 Q6JHZ5 121 aa11.55□□□□□ -0.56
RPUSD3-210ENST00000460909 Q5XG85 94 aa11.54□□□□□ -0.56
RPUSD3-210ENST00000460909 IGFL1Q6UW32 110 aa11.54□□□□□ -0.56
RPUSD3-210ENST00000460909 KRTAP13-3Q3SY46 172 aa11.52□□□□□ -0.57
RPUSD3-210ENST00000460909 NDUFV3P56181 108 aaKnown RBP11.51□□□□□ -0.57
RPUSD3-210ENST00000460909 H3BUT2 72 aa11.5□□□□□ -0.57
RPUSD3-210ENST00000460909 GHRHP01286 108 aa11.49□□□□□ -0.57
RPUSD3-210ENST00000460909 CDIP1Q9H305 208 aa11.49□□□□□ -0.57
RPUSD3-210ENST00000460909 DNAL4O96015 105 aa11.47□□□□□ -0.57
RPUSD3-210ENST00000460909 LST1O00453 97 aa11.46□□□□□ -0.57
RPUSD3-210ENST00000460909 FABP2P12104 132 aa11.46□□□□□ -0.57
RPUSD3-210ENST00000460909 ORMDL1Q9P0S3 153 aa11.46□□□□□ -0.57
RPUSD3-210ENST00000460909 RNF213Q63HN8 5207 aa11.46□□□□□ -0.58
RPUSD3-210ENST00000460909 TRACP01848 142 aa11.45□□□□□ -0.58
RPUSD3-210ENST00000460909 SCGB1C2P0DMR2 95 aa11.45□□□□□ -0.58
RPUSD3-210ENST00000460909 TRBV7-7A0A0K0K1E9 115 aa11.44□□□□□ -0.58
RPUSD3-210ENST00000460909 C1orf195Q5TG92 126 aa11.44□□□□□ -0.58
RPUSD3-210ENST00000460909 H3BMG7 143 aa11.43□□□□□ -0.58
RPUSD3-210ENST00000460909 H3BQ85 93 aa11.42□□□□□ -0.58
RPUSD3-210ENST00000460909 MUC17Q685J3 4493 aa11.41□□□□□ -0.58
RPUSD3-210ENST00000460909 TCL1BO95988 128 aa11.41□□□□□ -0.58
RPUSD3-210ENST00000460909 NAA38Q9BRA0 125 aaKnown RBP11.41□□□□□ -0.58
RPUSD3-210ENST00000460909 TMEM256-PLSCR3K7ERE1 68 aa11.4□□□□□ -0.58
RPUSD3-210ENST00000460909 Q6Q795 121 aa11.4□□□□□ -0.58
RPUSD3-210ENST00000460909 ASB16-AS1Q495Z4 193 aa11.39□□□□□ -0.59
RPUSD3-210ENST00000460909 BATFQ16520 125 aa11.38□□□□□ -0.59
RPUSD3-210ENST00000460909 TEN1Q86WV5 123 aa11.36□□□□□ -0.59
RPUSD3-210ENST00000460909 UBE2V1Q13404 147 aa11.35□□□□□ -0.59
RPUSD3-210ENST00000460909 MUC2Q02817 5179 aa11.33□□□□□ -0.6
RPUSD3-210ENST00000460909 A0A1W2PNM2 257 aa11.32□□□□□ -0.6
RPUSD3-210ENST00000460909 ATXN8Q156A1 80 aa11.31□□□□□ -0.6
RPUSD3-210ENST00000460909 XP32Q5T750 250 aa11.31□□□□□ -0.6
RPUSD3-210ENST00000460909 A0A1B0GV72 72 aa11.3□□□□□ -0.6
RPUSD3-210ENST00000460909 BAALC-AS2P0C853 105 aa11.3□□□□□ -0.6
RPUSD3-210ENST00000460909 ANKRD29Q8N6D5 301 aa11.29□□□□□ -0.6
RPUSD3-210ENST00000460909 C9orf92A6NGG3 77 aa11.28□□□□□ -0.6
RPUSD3-210ENST00000460909 TAX1BP3O14907 124 aa11.28□□□□□ -0.6
RPUSD3-210ENST00000460909 A0A087WSZ3 146 aa11.26□□□□□ -0.61
RPUSD3-210ENST00000460909 C9orf118A6NHY6 69 aa11.26□□□□□ -0.61
RPUSD3-210ENST00000460909 LYRM7Q5U5X0 104 aa11.26□□□□□ -0.61
RPUSD3-210ENST00000460909 SS18L2Q9UHA2 77 aa11.26□□□□□ -0.61
RPUSD3-210ENST00000460909 TRBV20-1A0A075B6N2 111 aa11.24□□□□□ -0.61
RPUSD3-210ENST00000460909 TRBV7-4A0A0J9YYF1 115 aa11.24□□□□□ -0.61
RPUSD3-210ENST00000460909 RBM3P98179 157 aaKnown RBP11.22□□□□□ -0.61
RPUSD3-210ENST00000460909 Q96NJ1 140 aa11.21□□□□□ -0.61
RPUSD3-210ENST00000460909 A0A1W2PPM0 123 aa11.2□□□□□ -0.62
RPUSD3-210ENST00000460909 CCKP06307 115 aa11.2□□□□□ -0.62
RPUSD3-210ENST00000460909 SEC61BP60468 96 aaKnown RBP11.19□□□□□ -0.62
RPUSD3-210ENST00000460909 DSCR8Q96T75 97 aa11.17□□□□□ -0.62
RPUSD3-210ENST00000460909 C9JAW5 83 aa11.16□□□□□ -0.62
RPUSD3-210ENST00000460909 KRTAP4-1Q9BYQ7 146 aa11.14□□□□□ -0.63
RPUSD3-210ENST00000460909 JMJD7-PLA2G4BH0Y9G9 81 aa11.12□□□□□ -0.63
RPUSD3-210ENST00000460909 COL5A1-AS1Q5SY13 56 aa11.1□□□□□ -0.63
RPUSD3-210ENST00000460909 OBSCN-AS1Q96MR7 158 aa11.1□□□□□ -0.63
RPUSD3-210ENST00000460909 VPS25Q9BRG1 176 aa11.1□□□□□ -0.63
RPUSD3-210ENST00000460909 LINC00472Q9H8W2 130 aa11.09□□□□□ -0.63
RPUSD3-210ENST00000460909 LOC110117498A0A087WWA1 95 aa11.08□□□□□ -0.64
RPUSD3-210ENST00000460909 Q6ZQT0 140 aa11.08□□□□□ -0.64
RPUSD3-210ENST00000460909 RPL37P61927 97 aaKnown RBP11.07□□□□□ -0.64
RPUSD3-210ENST00000460909 PCOTHQ58A44 107 aa11.07□□□□□ -0.64
RPUSD3-210ENST00000460909 H3BT86 120 aa11.06□□□□□ -0.64
RPUSD3-210ENST00000460909 MTURNQ8N3F0 131 aa11.05□□□□□ -0.64
RPUSD3-210ENST00000460909 SPCS1Q9Y6A9 102 aa11.05□□□□□ -0.64
RPUSD3-210ENST00000460909 PCP4L1A6NKN8 68 aa11.04□□□□□ -0.64
RPUSD3-210ENST00000460909 C14orf132Q9NPU4 83 aa11.04□□□□□ -0.64
RPUSD3-210ENST00000460909 IGKV4-1P06312 121 aa11.03□□□□□ -0.64
RPUSD3-210ENST00000460909 PDE6GP18545 87 aa11.03□□□□□ -0.64
RPUSD3-210ENST00000460909 DEFB116Q30KQ4 102 aa11.02□□□□□ -0.65
RPUSD3-210ENST00000460909 SIGMAR1Q99720 223 aa11.02□□□□□ -0.65
RPUSD3-210ENST00000460909 C21orf62-AS1Q17RA5 79 aa11.01□□□□□ -0.65
RPUSD3-210ENST00000460909 A0A0U1RQV1 116 aa11□□□□□ -0.65
RPUSD3-210ENST00000460909 FAT4Q6V0I7 4981 aa10.99□□□□□ -0.65
RPUSD3-210ENST00000460909 A0A1B0GW54 56 aa10.99□□□□□ -0.65
RPUSD3-210ENST00000460909 Q75L30 129 aa10.98□□□□□ -0.65
RPUSD3-210ENST00000460909 SMCPP49901 116 aaPredicted RBP10.96□□□□□ -0.65
RPUSD3-210ENST00000460909 DSCR10P59022 87 aa10.96□□□□□ -0.65
RPUSD3-210ENST00000460909 C20orf166-AS1Q96NR2 134 aa10.94□□□□□ -0.66
RPUSD3-210ENST00000460909 K7EP34 96 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms