RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 IGSF10Q6WRI0 2623 aa5.73□□□□□ -1.49
SHROOM4-203ENST00000460112 TNP2Q05952 138 aa5.72□□□□□ -1.49
SHROOM4-203ENST00000460112 M0R2T5 61 aa5.72□□□□□ -1.49
SHROOM4-203ENST00000460112 Q8N1X5 172 aa5.72□□□□□ -1.49
SHROOM4-203ENST00000460112 IGLV7-46A0A075B6I9 117 aa5.72□□□□□ -1.49
SHROOM4-203ENST00000460112 LAMA2P24043 3122 aaKnown RBP5.72□□□□□ -1.49
SHROOM4-203ENST00000460112 FLNCQ14315 2725 aa5.71□□□□□ -1.49
SHROOM4-203ENST00000460112 FRYLO94915 3013 aa5.71□□□□□ -1.5
SHROOM4-203ENST00000460112 DSPP15924 2871 aaKnown RBP5.71□□□□□ -1.5
SHROOM4-203ENST00000460112 NIPBLQ6KC79 2804 aaeCLIP5.7□□□□□ -1.5
SHROOM4-203ENST00000460112 A0A1B0GU33 70 aa5.7□□□□□ -1.5
SHROOM4-203ENST00000460112 SMR3BP02814 79 aaPredicted RBP5.7□□□□□ -1.5
SHROOM4-203ENST00000460112 FP248Q71RG6 208 aaPredicted RBP5.69□□□□□ -1.5
SHROOM4-203ENST00000460112 PRR26Q8N8Z3 221 aa5.69□□□□□ -1.5
SHROOM4-203ENST00000460112 CSAG1Q6PB30 78 aa5.68□□□□□ -1.5
SHROOM4-203ENST00000460112 S4R3F8 94 aa5.68□□□□□ -1.5
SHROOM4-203ENST00000460112 MGAQ8IWI9 3026 aa5.67□□□□□ -1.5
SHROOM4-203ENST00000460112 PRAC1Q96KF2 57 aa5.66□□□□□ -1.5
SHROOM4-203ENST00000460112 GOLGB1Q14789 3259 aaKnown RBP5.65□□□□□ -1.5
SHROOM4-203ENST00000460112 A0A1W2PNN7 141 aa5.65□□□□□ -1.5
SHROOM4-203ENST00000460112 GIG44P09565 113 aaPredicted RBP5.65□□□□□ -1.51
SHROOM4-203ENST00000460112 Q5VV11 94 aa5.65□□□□□ -1.51
SHROOM4-203ENST00000460112 Q8N9P0 234 aaPredicted RBP5.64□□□□□ -1.51
SHROOM4-203ENST00000460112 KRTAP16-1A8MUX0 517 aa5.64□□□□□ -1.51
SHROOM4-203ENST00000460112 LINC01558Q9Y6Z2 57 aa5.64□□□□□ -1.51
SHROOM4-203ENST00000460112 CHD9Q3L8U1 2897 aa5.64□□□□□ -1.51
SHROOM4-203ENST00000460112 ANAPC11Q9NYG5 84 aa5.64□□□□□ -1.51
SHROOM4-203ENST00000460112 C5orf42Q9H799 3197 aa5.63□□□□□ -1.51
SHROOM4-203ENST00000460112 A0A1W2PNM2 257 aa5.63□□□□□ -1.51
SHROOM4-203ENST00000460112 VPS13AQ96RL7 3174 aa5.62□□□□□ -1.51
SHROOM4-203ENST00000460112 ZCCHC13Q8WW36 166 aaKnown RBP5.62□□□□□ -1.51
SHROOM4-203ENST00000460112 CHD7Q9P2D1 2997 aa5.61□□□□□ -1.51
SHROOM4-203ENST00000460112 SEC61BP60468 96 aaKnown RBP5.61□□□□□ -1.51
SHROOM4-203ENST00000460112 FRYQ5TBA9 3013 aa5.6□□□□□ -1.51
SHROOM4-203ENST00000460112 A0A096LNT2 108 aa5.59□□□□□ -1.51
SHROOM4-203ENST00000460112 A0A0G2JQZ4 141 aa5.58□□□□□ -1.52
SHROOM4-203ENST00000460112 SPRR1AP35321 89 aa5.57□□□□□ -1.52
SHROOM4-203ENST00000460112 CASC10Q5T4H9 136 aa5.57□□□□□ -1.52
SHROOM4-203ENST00000460112 LRBAP50851 2863 aa5.57□□□□□ -1.52
SHROOM4-203ENST00000460112 SPRR1BP22528 89 aa5.56□□□□□ -1.52
SHROOM4-203ENST00000460112 R4GN34 69 aa5.56□□□□□ -1.52
SHROOM4-203ENST00000460112 A0A087X002 238 aa5.56□□□□□ -1.52
SHROOM4-203ENST00000460112 CYSTM1Q9H1C7 97 aa5.56□□□□□ -1.52
SHROOM4-203ENST00000460112 KRTAP10-3P60369 221 aa5.56□□□□□ -1.52
SHROOM4-203ENST00000460112 HIVEP1P15822 2718 aa5.55□□□□□ -1.52
SHROOM4-203ENST00000460112 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.55□□□□□ -1.52
SHROOM4-203ENST00000460112 PLAC8Q9NZF1 115 aa5.55□□□□□ -1.52
SHROOM4-203ENST00000460112 KALRNO60229 2985 aa5.54□□□□□ -1.52
SHROOM4-203ENST00000460112 SPINK7P58062 85 aa5.53□□□□□ -1.52
SHROOM4-203ENST00000460112 NF1P21359 2839 aa5.51□□□□□ -1.53
SHROOM4-203ENST00000460112 OXTP01178 125 aa5.49□□□□□ -1.53
SHROOM4-203ENST00000460112 MMP24-AS1A0A0U1RRL7 71 aa5.49□□□□□ -1.53
SHROOM4-203ENST00000460112 PLAC4Q8WY50 150 aa5.49□□□□□ -1.53
SHROOM4-203ENST00000460112 ROMO1P60602 79 aa5.48□□□□□ -1.53
SHROOM4-203ENST00000460112 LINC00472Q9H8W2 130 aa5.47□□□□□ -1.53
SHROOM4-203ENST00000460112 Q5W150 140 aa5.47□□□□□ -1.53
SHROOM4-203ENST00000460112 TENM3Q9P273 2699 aa5.47□□□□□ -1.53
SHROOM4-203ENST00000460112 TACC2O95359 2948 aa5.46□□□□□ -1.54
SHROOM4-203ENST00000460112 RPL37P61927 97 aaKnown RBP5.46□□□□□ -1.54
SHROOM4-203ENST00000460112 Q6ZR54 194 aa5.45□□□□□ -1.54
SHROOM4-203ENST00000460112 TRIOO75962 3097 aa5.45□□□□□ -1.54
SHROOM4-203ENST00000460112 TENM1Q9UKZ4 2725 aa5.45□□□□□ -1.54
SHROOM4-203ENST00000460112 CELSR2Q9HCU4 2923 aa5.44□□□□□ -1.54
SHROOM4-203ENST00000460112 ZZEF1O43149 2961 aa5.43□□□□□ -1.54
SHROOM4-203ENST00000460112 ASH1LQ9NR48 2969 aaKnown RBP5.43□□□□□ -1.54
SHROOM4-203ENST00000460112 Q5VSD8 79 aa5.42□□□□□ -1.54
SHROOM4-203ENST00000460112 M0QZ58 72 aa5.42□□□□□ -1.54
SHROOM4-203ENST00000460112 NBEAQ8NFP9 2946 aa5.41□□□□□ -1.54
SHROOM4-203ENST00000460112 KRTAP1-3Q8IUG1 177 aa5.41□□□□□ -1.54
SHROOM4-203ENST00000460112 UTRNP46939 3433 aa5.41□□□□□ -1.54
SHROOM4-203ENST00000460112 H1FX-AS1Q4G0G2 97 aa5.41□□□□□ -1.54
SHROOM4-203ENST00000460112 KRTAP1-1Q07627 177 aa5.4□□□□□ -1.55
SHROOM4-203ENST00000460112 A6NN06 94 aa5.38□□□□□ -1.55
SHROOM4-203ENST00000460112 WDFY4Q6ZS81 3184 aa5.37□□□□□ -1.55
SHROOM4-203ENST00000460112 RPS29P62273 56 aaKnown RBP5.36□□□□□ -1.55
SHROOM4-203ENST00000460112 ZANQ9Y493 2812 aa5.35□□□□□ -1.55
SHROOM4-203ENST00000460112 PRUNE2Q8WUY3 3088 aa5.35□□□□□ -1.55
SHROOM4-203ENST00000460112 PDZD2O15018 2839 aa5.35□□□□□ -1.55
SHROOM4-203ENST00000460112 RANBP2P49792 3224 aaKnown RBP5.34□□□□□ -1.55
SHROOM4-203ENST00000460112 LCE6AA0A183 80 aa5.34□□□□□ -1.55
SHROOM4-203ENST00000460112 KRTAP25-1Q3LHN0 102 aa5.33□□□□□ -1.56
SHROOM4-203ENST00000460112 TNRC18O15417 2968 aaPredicted RBP5.33□□□□□ -1.56
SHROOM4-203ENST00000460112 ADM2Q7Z4H4 148 aa5.32□□□□□ -1.56
SHROOM4-203ENST00000460112 NDUFAF8A1L188 74 aa5.32□□□□□ -1.56
SHROOM4-203ENST00000460112 SPATA8Q6RVD6 105 aa5.31□□□□□ -1.56
SHROOM4-203ENST00000460112 CRYBG3Q68DQ2 2970 aa5.31□□□□□ -1.56
SHROOM4-203ENST00000460112 PANO1I0J062 215 aa5.3□□□□□ -1.56
SHROOM4-203ENST00000460112 KRTAP4-16G5E9R7 235 aaPredicted RBP5.29□□□□□ -1.56
SHROOM4-203ENST00000460112 KRTAP26-1Q6PEX3 210 aa5.29□□□□□ -1.56
SHROOM4-203ENST00000460112 COL12A1Q99715 3063 aa5.29□□□□□ -1.56
SHROOM4-203ENST00000460112 DMXL2Q8TDJ6 3036 aa5.29□□□□□ -1.56
SHROOM4-203ENST00000460112 DCHS2Q6V1P9 2916 aa5.28□□□□□ -1.56
SHROOM4-203ENST00000460112 KRTAP29-1A8MX34 341 aaPredicted RBP5.28□□□□□ -1.56
SHROOM4-203ENST00000460112 HTTP42858 3142 aa5.23□□□□□ -1.57
SHROOM4-203ENST00000460112 TGP01266 2768 aa5.22□□□□□ -1.57
SHROOM4-203ENST00000460112 KRTAP10-1P60331 282 aa5.21□□□□□ -1.58
SHROOM4-203ENST00000460112 ADGRG4Q8IZF6 3080 aa5.19□□□□□ -1.58
SHROOM4-203ENST00000460112 MXRA5Q9NR99 2828 aa5.18□□□□□ -1.58
SHROOM4-203ENST00000460112 C20orf166-AS1Q96NR2 134 aa5.18□□□□□ -1.58
SHROOM4-203ENST00000460112 FBN2P35556 2912 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms