RNA–Protein interactions for RNA: ENST00000458729.5

SEMA3C-205, Transcript of semaphorin 3C, humanhuman

TSL 2

Gene SEMA3C, Length 1,318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-205ENST00000458729 A0A1B0GX51 115 aa14.88□□□□□ -0.03
SEMA3C-205ENST00000458729 COX6CP09669 75 aa14.87□□□□□ -0.03
SEMA3C-205ENST00000458729 PPDPFLQ8WWR9 84 aa14.87□□□□□ -0.03
SEMA3C-205ENST00000458729 FAM218AQ96MZ4 157 aa14.87□□□□□ -0.03
SEMA3C-205ENST00000458729 OCIAD2Q56VL3 154 aa14.86□□□□□ -0.03
SEMA3C-205ENST00000458729 RPS29P62273 56 aaKnown RBP14.83□□□□□ -0.04
SEMA3C-205ENST00000458729 PRR4Q16378 134 aa14.83□□□□□ -0.04
SEMA3C-205ENST00000458729 F8WEM9 126 aa14.82□□□□□ -0.04
SEMA3C-205ENST00000458729 GHRHP01286 108 aa14.79□□□□□ -0.04
SEMA3C-205ENST00000458729 CLEC2BQ92478 149 aa14.78□□□□□ -0.04
SEMA3C-205ENST00000458729 SNHG12Q9BXW3 62 aa14.78□□□□□ -0.04
SEMA3C-205ENST00000458729 RETNLBQ9BQ08 111 aa14.76□□□□□ -0.05
SEMA3C-205ENST00000458729 CD164Q04900 197 aa14.75□□□□□ -0.05
SEMA3C-205ENST00000458729 SCGB1C2P0DMR2 95 aa14.74□□□□□ -0.05
SEMA3C-205ENST00000458729 DNAL4O96015 105 aa14.73□□□□□ -0.05
SEMA3C-205ENST00000458729 IGLV8-61A0A075B6I0 122 aa14.71□□□□□ -0.05
SEMA3C-205ENST00000458729 HRCT1Q6UXD1 115 aa14.71□□□□□ -0.05
SEMA3C-205ENST00000458729 Q6JHZ5 121 aa14.7□□□□□ -0.06
SEMA3C-205ENST00000458729 H3BQ85 93 aa14.68□□□□□ -0.06
SEMA3C-205ENST00000458729 LIMD2Q9BT23 127 aa14.68□□□□□ -0.06
SEMA3C-205ENST00000458729 BATFQ16520 125 aa14.67□□□□□ -0.06
SEMA3C-205ENST00000458729 FP248Q71RG6 208 aaPredicted RBP14.66□□□□□ -0.06
SEMA3C-205ENST00000458729 ORMDL1Q9P0S3 153 aa14.66□□□□□ -0.06
SEMA3C-205ENST00000458729 FABP2P12104 132 aa14.66□□□□□ -0.06
SEMA3C-205ENST00000458729 A0A0G2JQZ4 141 aa14.65□□□□□ -0.06
SEMA3C-205ENST00000458729 TRACP01848 142 aa14.65□□□□□ -0.06
SEMA3C-205ENST00000458729 NDUFV3P56181 108 aaKnown RBP14.65□□□□□ -0.06
SEMA3C-205ENST00000458729 IGLV7-46A0A075B6I9 117 aa14.64□□□□□ -0.07
SEMA3C-205ENST00000458729 LST1O00453 97 aa14.64□□□□□ -0.07
SEMA3C-205ENST00000458729 IGFL1Q6UW32 110 aa14.62□□□□□ -0.07
SEMA3C-205ENST00000458729 TMEM256-PLSCR3K7ERE1 68 aa14.6□□□□□ -0.07
SEMA3C-205ENST00000458729 LRP2P98164 4655 aa14.59□□□□□ -0.07
SEMA3C-205ENST00000458729 H3BUT2 72 aa14.59□□□□□ -0.07
SEMA3C-205ENST00000458729 Q5XG85 94 aa14.59□□□□□ -0.07
SEMA3C-205ENST00000458729 NAA38Q9BRA0 125 aaKnown RBP14.59□□□□□ -0.07
SEMA3C-205ENST00000458729 H3BMG7 143 aa14.57□□□□□ -0.08
SEMA3C-205ENST00000458729 LYRM7Q5U5X0 104 aa14.56□□□□□ -0.08
SEMA3C-205ENST00000458729 ATXN8Q156A1 80 aa14.54□□□□□ -0.08
SEMA3C-205ENST00000458729 TPRXLQ17RH7 258 aa14.54□□□□□ -0.08
SEMA3C-205ENST00000458729 LPAP08519 4548 aa14.52□□□□□ -0.08
SEMA3C-205ENST00000458729 TCL1BO95988 128 aa14.51□□□□□ -0.09
SEMA3C-205ENST00000458729 UBE2V1Q13404 147 aa14.51□□□□□ -0.09
SEMA3C-205ENST00000458729 TRBV7-7A0A0K0K1E9 115 aa14.5□□□□□ -0.09
SEMA3C-205ENST00000458729 C9orf118A6NHY6 69 aa14.48□□□□□ -0.09
SEMA3C-205ENST00000458729 UBR4Q5T4S7 5183 aa14.48□□□□□ -0.09
SEMA3C-205ENST00000458729 TRBV20-1A0A075B6N2 111 aa14.47□□□□□ -0.09
SEMA3C-205ENST00000458729 TAX1BP3O14907 124 aa14.47□□□□□ -0.09
SEMA3C-205ENST00000458729 Q6Q795 121 aa14.47□□□□□ -0.09
SEMA3C-205ENST00000458729 BAALC-AS2P0C853 105 aa14.45□□□□□ -0.1
SEMA3C-205ENST00000458729 TEN1Q86WV5 123 aa14.45□□□□□ -0.1
SEMA3C-205ENST00000458729 CDIP1Q9H305 208 aa14.44□□□□□ -0.1
SEMA3C-205ENST00000458729 KRTAP13-3Q3SY46 172 aa14.42□□□□□ -0.1
SEMA3C-205ENST00000458729 C1orf195Q5TG92 126 aa14.42□□□□□ -0.1
SEMA3C-205ENST00000458729 ANKRD29Q8N6D5 301 aa14.42□□□□□ -0.1
SEMA3C-205ENST00000458729 ASB16-AS1Q495Z4 193 aa14.41□□□□□ -0.1
SEMA3C-205ENST00000458729 A0A1B0GV72 72 aa14.39□□□□□ -0.11
SEMA3C-205ENST00000458729 A0A1W2PPM0 123 aa14.39□□□□□ -0.11
SEMA3C-205ENST00000458729 COL5A1-AS1Q5SY13 56 aa14.37□□□□□ -0.11
SEMA3C-205ENST00000458729 SS18L2Q9UHA2 77 aa14.37□□□□□ -0.11
SEMA3C-205ENST00000458729 RBM3P98179 157 aaKnown RBP14.36□□□□□ -0.11
SEMA3C-205ENST00000458729 A0A1W2PNM2 257 aa14.34□□□□□ -0.11
SEMA3C-205ENST00000458729 PCP4L1A6NKN8 68 aa14.33□□□□□ -0.12
SEMA3C-205ENST00000458729 TRBV7-4A0A0J9YYF1 115 aa14.32□□□□□ -0.12
SEMA3C-205ENST00000458729 A0A087WSZ3 146 aa14.31□□□□□ -0.12
SEMA3C-205ENST00000458729 C9JAW5 83 aa14.31□□□□□ -0.12
SEMA3C-205ENST00000458729 DSCR8Q96T75 97 aa14.31□□□□□ -0.12
SEMA3C-205ENST00000458729 JMJD7-PLA2G4BH0Y9G9 81 aa14.28□□□□□ -0.12
SEMA3C-205ENST00000458729 CCKP06307 115 aa14.28□□□□□ -0.12
SEMA3C-205ENST00000458729 SPCS1Q9Y6A9 102 aa14.23□□□□□ -0.13
SEMA3C-205ENST00000458729 H3BT86 120 aa14.21□□□□□ -0.13
SEMA3C-205ENST00000458729 C9orf92A6NGG3 77 aa14.19□□□□□ -0.14
SEMA3C-205ENST00000458729 VPS25Q9BRG1 176 aa14.19□□□□□ -0.14
SEMA3C-205ENST00000458729 XP32Q5T750 250 aa14.18□□□□□ -0.14
SEMA3C-205ENST00000458729 PDE6GP18545 87 aa14.17□□□□□ -0.14
SEMA3C-205ENST00000458729 LOC110117498A0A087WWA1 95 aa14.15□□□□□ -0.14
SEMA3C-205ENST00000458729 C21orf62-AS1Q17RA5 79 aa14.15□□□□□ -0.14
SEMA3C-205ENST00000458729 OBSCN-AS1Q96MR7 158 aa14.15□□□□□ -0.15
SEMA3C-205ENST00000458729 RNF213Q63HN8 5207 aa14.15□□□□□ -0.15
SEMA3C-205ENST00000458729 Q6ZQT0 140 aa14.13□□□□□ -0.15
SEMA3C-205ENST00000458729 MTURNQ8N3F0 131 aa14.13□□□□□ -0.15
SEMA3C-205ENST00000458729 Q96NJ1 140 aa14.13□□□□□ -0.15
SEMA3C-205ENST00000458729 C14orf132Q9NPU4 83 aa14.11□□□□□ -0.15
SEMA3C-205ENST00000458729 SEC61BP60468 96 aaKnown RBP14.1□□□□□ -0.15
SEMA3C-205ENST00000458729 MUC17Q685J3 4493 aa14.09□□□□□ -0.15
SEMA3C-205ENST00000458729 A0A1B0GW54 56 aa14.09□□□□□ -0.15
SEMA3C-205ENST00000458729 K7EP34 96 aa14.09□□□□□ -0.15
SEMA3C-205ENST00000458729 LINC00472Q9H8W2 130 aa14.05□□□□□ -0.16
SEMA3C-205ENST00000458729 IGKV4-1P06312 121 aa14.02□□□□□ -0.17
SEMA3C-205ENST00000458729 GTF2H5Q6ZYL4 71 aa14.02□□□□□ -0.17
SEMA3C-205ENST00000458729 SIGMAR1Q99720 223 aa14.02□□□□□ -0.17
SEMA3C-205ENST00000458729 SMCPP49901 116 aaPredicted RBP13.99□□□□□ -0.17
SEMA3C-205ENST00000458729 PRO0461Q9UI25 63 aa13.97□□□□□ -0.17
SEMA3C-205ENST00000458729 DEFB116Q30KQ4 102 aa13.96□□□□□ -0.17
SEMA3C-205ENST00000458729 RPL37P61927 97 aaKnown RBP13.93□□□□□ -0.18
SEMA3C-205ENST00000458729 J3KT08 172 aa13.92□□□□□ -0.18
SEMA3C-205ENST00000458729 MUC2Q02817 5179 aa13.89□□□□□ -0.19
SEMA3C-205ENST00000458729 PCOTHQ58A44 107 aa13.89□□□□□ -0.19
SEMA3C-205ENST00000458729 F8W1H4 67 aa13.87□□□□□ -0.19
SEMA3C-205ENST00000458729 LINC00313P59037 77 aa13.87□□□□□ -0.19
SEMA3C-205ENST00000458729 DSCR10P59022 87 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms