RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 Q1RN00 199 aa9.23□□□□□ -0.93
CD28-203ENST00000458610 H0YGX0 51 aa9.21□□□□□ -0.94
CD28-203ENST00000458610 PRO1854Q9UHT4 67 aa9.21□□□□□ -0.94
CD28-203ENST00000458610 LINC01547P58512 204 aaPredicted RBP9.2□□□□□ -0.94
CD28-203ENST00000458610 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.2□□□□□ -0.94
CD28-203ENST00000458610 F8WEM9 126 aa9.19□□□□□ -0.94
CD28-203ENST00000458610 CD164Q04900 197 aa9.19□□□□□ -0.94
CD28-203ENST00000458610 SMIM29Q86T20 159 aa9.19□□□□□ -0.94
CD28-203ENST00000458610 Q8N377 158 aa9.19□□□□□ -0.94
CD28-203ENST00000458610 LIMD2Q9BT23 127 aa9.19□□□□□ -0.94
CD28-203ENST00000458610 TPRXLQ17RH7 258 aa9.18□□□□□ -0.94
CD28-203ENST00000458610 Q6ZQY7 126 aa9.18□□□□□ -0.94
CD28-203ENST00000458610 PPDPFLQ8WWR9 84 aa9.17□□□□□ -0.94
CD28-203ENST00000458610 LRP2P98164 4655 aa9.16□□□□□ -0.94
CD28-203ENST00000458610 FXYD2P54710 66 aa9.16□□□□□ -0.94
CD28-203ENST00000458610 CDIP1Q9H305 208 aa9.16□□□□□ -0.94
CD28-203ENST00000458610 GHRHP01286 108 aa9.15□□□□□ -0.94
CD28-203ENST00000458610 OCIAD2Q56VL3 154 aa9.15□□□□□ -0.94
CD28-203ENST00000458610 HRCT1Q6UXD1 115 aa9.14□□□□□ -0.95
CD28-203ENST00000458610 GTF2H5Q6ZYL4 71 aa9.13□□□□□ -0.95
CD28-203ENST00000458610 UBR4Q5T4S7 5183 aa9.12□□□□□ -0.95
CD28-203ENST00000458610 A0A1B0GX51 115 aa9.12□□□□□ -0.95
CD28-203ENST00000458610 C9orf118A6NHY6 69 aa9.12□□□□□ -0.95
CD28-203ENST00000458610 UBE2V1Q13404 147 aa9.12□□□□□ -0.95
CD28-203ENST00000458610 Q6JHZ5 121 aa9.12□□□□□ -0.95
CD28-203ENST00000458610 TAX1BP3O14907 124 aa9.11□□□□□ -0.95
CD28-203ENST00000458610 COX6CP09669 75 aa9.09□□□□□ -0.95
CD28-203ENST00000458610 PSMB2P49721 201 aa9.09□□□□□ -0.95
CD28-203ENST00000458610 Q5XG85 94 aa9.08□□□□□ -0.96
CD28-203ENST00000458610 IGLV8-61A0A075B6I0 122 aa9.07□□□□□ -0.96
CD28-203ENST00000458610 TRIAP1O43715 76 aa9.06□□□□□ -0.96
CD28-203ENST00000458610 TCL1BO95988 128 aa9.06□□□□□ -0.96
CD28-203ENST00000458610 FABP2P12104 132 aa9.06□□□□□ -0.96
CD28-203ENST00000458610 LYRM7Q5U5X0 104 aa9.06□□□□□ -0.96
CD28-203ENST00000458610 KRTAP13-3Q3SY46 172 aa9.05□□□□□ -0.96
CD28-203ENST00000458610 FAM218AQ96MZ4 157 aa9.05□□□□□ -0.96
CD28-203ENST00000458610 H3BQ85 93 aa9.04□□□□□ -0.96
CD28-203ENST00000458610 CLEC2BQ92478 149 aa9.04□□□□□ -0.96
CD28-203ENST00000458610 LPAP08519 4548 aa9.03□□□□□ -0.96
CD28-203ENST00000458610 K7ERJ3 54 aa9.03□□□□□ -0.96
CD28-203ENST00000458610 DNAL4O96015 105 aa9.03□□□□□ -0.96
CD28-203ENST00000458610 A0A0G2JQZ4 141 aa9.02□□□□□ -0.97
CD28-203ENST00000458610 H3BUT2 72 aa9.02□□□□□ -0.97
CD28-203ENST00000458610 NDUFV3P56181 108 aaKnown RBP9.01□□□□□ -0.97
CD28-203ENST00000458610 IGFL1Q6UW32 110 aa9.01□□□□□ -0.97
CD28-203ENST00000458610 A0A1W2PPM0 123 aa9□□□□□ -0.97
CD28-203ENST00000458610 SCGB1C2P0DMR2 95 aa8.99□□□□□ -0.97
CD28-203ENST00000458610 TRBV7-7A0A0K0K1E9 115 aa8.98□□□□□ -0.97
CD28-203ENST00000458610 ORMDL1Q9P0S3 153 aa8.98□□□□□ -0.97
CD28-203ENST00000458610 C1orf195Q5TG92 126 aa8.97□□□□□ -0.97
CD28-203ENST00000458610 SPCS1Q9Y6A9 102 aa8.97□□□□□ -0.97
CD28-203ENST00000458610 H3BMG7 143 aa8.96□□□□□ -0.98
CD28-203ENST00000458610 K7EP34 96 aa8.96□□□□□ -0.98
CD28-203ENST00000458610 TRBV20-1A0A075B6N2 111 aa8.95□□□□□ -0.98
CD28-203ENST00000458610 TMEM256-PLSCR3K7ERE1 68 aa8.95□□□□□ -0.98
CD28-203ENST00000458610 SEC61BP60468 96 aaKnown RBP8.95□□□□□ -0.98
CD28-203ENST00000458610 ASB16-AS1Q495Z4 193 aa8.95□□□□□ -0.98
CD28-203ENST00000458610 A0A0U1RQV1 116 aa8.94□□□□□ -0.98
CD28-203ENST00000458610 F8W1H4 67 aa8.93□□□□□ -0.98
CD28-203ENST00000458610 TRACP01848 142 aa8.93□□□□□ -0.98
CD28-203ENST00000458610 Q6Q795 121 aa8.93□□□□□ -0.98
CD28-203ENST00000458610 TEN1Q86WV5 123 aa8.93□□□□□ -0.98
CD28-203ENST00000458610 SS18L2Q9UHA2 77 aa8.92□□□□□ -0.98
CD28-203ENST00000458610 XP32Q5T750 250 aa8.91□□□□□ -0.98
CD28-203ENST00000458610 LST1O00453 97 aa8.89□□□□□ -0.99
CD28-203ENST00000458610 K7ERU9 68 aa8.88□□□□□ -0.99
CD28-203ENST00000458610 ANKRD29Q8N6D5 301 aa8.88□□□□□ -0.99
CD28-203ENST00000458610 RNF213Q63HN8 5207 aa8.87□□□□□ -0.99
CD28-203ENST00000458610 C9orf92A6NGG3 77 aa8.87□□□□□ -0.99
CD28-203ENST00000458610 J3QR89 54 aa8.87□□□□□ -0.99
CD28-203ENST00000458610 ATXN8Q156A1 80 aa8.84□□□□□ -0.99
CD28-203ENST00000458610 NAA38Q9BRA0 125 aaKnown RBP8.83□□□□□ -1
CD28-203ENST00000458610 A0A087WSZ3 146 aa8.82□□□□□ -1
CD28-203ENST00000458610 BAALC-AS2P0C853 105 aa8.82□□□□□ -1
CD28-203ENST00000458610 TRBV7-4A0A0J9YYF1 115 aa8.81□□□□□ -1
CD28-203ENST00000458610 RBM3P98179 157 aaKnown RBP8.8□□□□□ -1
CD28-203ENST00000458610 A0A1W2PNM2 257 aa8.79□□□□□ -1
CD28-203ENST00000458610 A0A1B0GV72 72 aa8.78□□□□□ -1
CD28-203ENST00000458610 DSCR8Q96T75 97 aa8.78□□□□□ -1
CD28-203ENST00000458610 CCKP06307 115 aa8.77□□□□□ -1.01
CD28-203ENST00000458610 C21orf62-AS1Q17RA5 79 aa8.76□□□□□ -1.01
CD28-203ENST00000458610 JMJD7-PLA2G4BH0Y9G9 81 aa8.74□□□□□ -1.01
CD28-203ENST00000458610 C9JAW5 83 aa8.73□□□□□ -1.01
CD28-203ENST00000458610 PCOTHQ58A44 107 aa8.73□□□□□ -1.01
CD28-203ENST00000458610 RPL37P61927 97 aaKnown RBP8.72□□□□□ -1.01
CD28-203ENST00000458610 MUC17Q685J3 4493 aa8.72□□□□□ -1.01
CD28-203ENST00000458610 VPS25Q9BRG1 176 aa8.71□□□□□ -1.02
CD28-203ENST00000458610 OBSCN-AS1Q96MR7 158 aa8.7□□□□□ -1.02
CD28-203ENST00000458610 PRO0461Q9UI25 63 aa8.7□□□□□ -1.02
CD28-203ENST00000458610 H3BT86 120 aa8.69□□□□□ -1.02
CD28-203ENST00000458610 PDE6GP18545 87 aa8.69□□□□□ -1.02
CD28-203ENST00000458610 Q96NJ1 140 aa8.69□□□□□ -1.02
CD28-203ENST00000458610 ETDBQ3ZM63 59 aa8.68□□□□□ -1.02
CD28-203ENST00000458610 IGKV4-1P06312 121 aa8.67□□□□□ -1.02
CD28-203ENST00000458610 SIGMAR1Q99720 223 aa8.67□□□□□ -1.02
CD28-203ENST00000458610 MUC2Q02817 5179 aa8.67□□□□□ -1.02
CD28-203ENST00000458610 A0A1B0GW54 56 aa8.66□□□□□ -1.02
CD28-203ENST00000458610 KRTAP4-1Q9BYQ7 146 aa8.66□□□□□ -1.02
CD28-203ENST00000458610 ATP11AUNQ6ZP68 121 aa8.65□□□□□ -1.02
CD28-203ENST00000458610 Q75L30 129 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms