RNA–Protein interactions for RNA: ENST00000458013.6

SNX27-204, Transcript of sorting nexin family member 27, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SNX27, Length 6,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-204ENST00000458013 KRTAP10-1P60331 282 aa11.77□□□□□ -0.53
SNX27-204ENST00000458013 OXTP01178 125 aa11.76□□□□□ -0.53
SNX27-204ENST00000458013 M0QZ58 72 aa11.75□□□□□ -0.53
SNX27-204ENST00000458013 ADM2Q7Z4H4 148 aa11.7□□□□□ -0.54
SNX27-204ENST00000458013 ROMO1P60602 79 aa11.68□□□□□ -0.54
SNX27-204ENST00000458013 PANO1I0J062 215 aa11.67□□□□□ -0.54
SNX27-204ENST00000458013 H1FX-AS1Q4G0G2 97 aa11.67□□□□□ -0.54
SNX27-204ENST00000458013 MKI67P46013 3256 aaKnown RBP11.62□□□□□ -0.55
SNX27-204ENST00000458013 A0A0A0MQY5 61 aa11.62□□□□□ -0.55
SNX27-204ENST00000458013 RPL37P61927 97 aaKnown RBP11.61□□□□□ -0.55
SNX27-204ENST00000458013 Q6ZR54 194 aa11.59□□□□□ -0.55
SNX27-204ENST00000458013 SEC61BP60468 96 aaKnown RBP11.57□□□□□ -0.56
SNX27-204ENST00000458013 SPRR1BP22528 89 aa11.57□□□□□ -0.56
SNX27-204ENST00000458013 PRRC2CQ9Y520 2896 aaKnown RBP11.55□□□□□ -0.56
SNX27-204ENST00000458013 A0A087X002 238 aa11.53□□□□□ -0.56
SNX27-204ENST00000458013 NOTCH2NLQ7Z3S9 236 aa11.53□□□□□ -0.56
SNX27-204ENST00000458013 PLAC4Q8WY50 150 aa11.48□□□□□ -0.57
SNX27-204ENST00000458013 CFAP54Q96N23 3096 aa11.46□□□□□ -0.57
SNX27-204ENST00000458013 A8MU10 97 aa11.44□□□□□ -0.58
SNX27-204ENST00000458013 XIRP2A4UGR9 3374 aa11.43□□□□□ -0.58
SNX27-204ENST00000458013 USP24Q9UPU5 2620 aa11.42□□□□□ -0.58
SNX27-204ENST00000458013 CHD7Q9P2D1 2997 aa11.4□□□□□ -0.58
SNX27-204ENST00000458013 LCE6AA0A183 80 aa11.4□□□□□ -0.58
SNX27-204ENST00000458013 KRTAP11-1Q8IUC1 163 aa11.4□□□□□ -0.58
SNX27-204ENST00000458013 HECTD1Q9ULT8 2610 aa11.4□□□□□ -0.59
SNX27-204ENST00000458013 KRTAP4-16G5E9R7 235 aaPredicted RBP11.33□□□□□ -0.6
SNX27-204ENST00000458013 KRTAP29-1A8MX34 341 aaPredicted RBP11.3□□□□□ -0.6
SNX27-204ENST00000458013 BRCA2P51587 3418 aa11.3□□□□□ -0.6
SNX27-204ENST00000458013 MGAM2Q2M2H8 2515 aa11.29□□□□□ -0.6
SNX27-204ENST00000458013 FLNAP21333 2647 aaKnown RBP11.26□□□□□ -0.61
SNX27-204ENST00000458013 C20orf166-AS1Q96NR2 134 aa11.26□□□□□ -0.61
SNX27-204ENST00000458013 A0A0C4DFX4 3053 aa11.26□□□□□ -0.61
SNX27-204ENST00000458013 CELSR3Q9NYQ7 3312 aa11.23□□□□□ -0.61
SNX27-204ENST00000458013 DNAH14Q0VDD8 3507 aa11.23□□□□□ -0.61
SNX27-204ENST00000458013 TRIOO75962 3097 aa11.22□□□□□ -0.61
SNX27-204ENST00000458013 ITPR3Q14573 2671 aa11.21□□□□□ -0.62
SNX27-204ENST00000458013 LAMA3Q16787 3333 aa11.2□□□□□ -0.62
SNX27-204ENST00000458013 A8MUU9 505 aa11.18□□□□□ -0.62
SNX27-204ENST00000458013 KRTAP25-1Q3LHN0 102 aa11.14□□□□□ -0.63
SNX27-204ENST00000458013 CDH23Q9H251 3354 aa11.12□□□□□ -0.63
SNX27-204ENST00000458013 KRTAP7-1Q8IUC3 87 aa11.12□□□□□ -0.63
SNX27-204ENST00000458013 LAMA2P24043 3122 aaKnown RBP11.12□□□□□ -0.63
SNX27-204ENST00000458013 EPG5Q9HCE0 2579 aa11.11□□□□□ -0.63
SNX27-204ENST00000458013 HTTP42858 3142 aa11.1□□□□□ -0.63
SNX27-204ENST00000458013 UNC80Q8N2C7 3258 aa11.07□□□□□ -0.64
SNX27-204ENST00000458013 A6NN06 94 aa11.06□□□□□ -0.64
SNX27-204ENST00000458013 FREM2Q5SZK8 3169 aa11.06□□□□□ -0.64
SNX27-204ENST00000458013 KRTAP16-1A8MUX0 517 aa11.06□□□□□ -0.64
SNX27-204ENST00000458013 SZT2Q5T011 3432 aa11.05□□□□□ -0.64
SNX27-204ENST00000458013 KRTAP13-2Q52LG2 175 aa11.04□□□□□ -0.64
SNX27-204ENST00000458013 ATRQ13535 2644 aa11.03□□□□□ -0.64
SNX27-204ENST00000458013 NDUFAF8A1L188 74 aa11.02□□□□□ -0.65
SNX27-204ENST00000458013 MGAQ8IWI9 3026 aa11.01□□□□□ -0.65
SNX27-204ENST00000458013 PRUNE2Q8WUY3 3088 aa10.96□□□□□ -0.65
SNX27-204ENST00000458013 Q6ZRN7 208 aaPredicted RBP10.96□□□□□ -0.65
SNX27-204ENST00000458013 C10orf95Q9H7T3 257 aa10.96□□□□□ -0.66
SNX27-204ENST00000458013 CHD9Q3L8U1 2897 aa10.95□□□□□ -0.66
SNX27-204ENST00000458013 RANBP2P49792 3224 aaKnown RBP10.95□□□□□ -0.66
SNX27-204ENST00000458013 ASB16-AS1Q495Z4 193 aa10.89□□□□□ -0.67
SNX27-204ENST00000458013 FLNBO75369 2602 aaKnown RBP10.89□□□□□ -0.67
SNX27-204ENST00000458013 WDFY4Q6ZS81 3184 aa10.88□□□□□ -0.67
SNX27-204ENST00000458013 COL6A3P12111 3177 aa10.87□□□□□ -0.67
SNX27-204ENST00000458013 MAST4O15021 2626 aa10.86□□□□□ -0.67
SNX27-204ENST00000458013 A0A1B0GVY2 172 aa10.86□□□□□ -0.67
SNX27-204ENST00000458013 CHD6Q8TD26 2715 aa10.85□□□□□ -0.67
SNX27-204ENST00000458013 CFAP46Q8IYW2 2715 aa10.85□□□□□ -0.67
SNX27-204ENST00000458013 VPS13AQ96RL7 3174 aa10.81□□□□□ -0.68
SNX27-204ENST00000458013 HELZ2Q9BYK8 2649 aaKnown RBP10.79□□□□□ -0.68
SNX27-204ENST00000458013 KRTAP13-1Q8IUC0 172 aa10.77□□□□□ -0.68
SNX27-204ENST00000458013 RPS29P62273 56 aaKnown RBP10.75□□□□□ -0.69
SNX27-204ENST00000458013 AKAP13Q12802 2813 aa10.74□□□□□ -0.69
SNX27-204ENST00000458013 TNP1P09430 55 aa10.72□□□□□ -0.69
SNX27-204ENST00000458013 VCANP13611 3396 aa10.72□□□□□ -0.69
SNX27-204ENST00000458013 TEX15Q9BXT5 2789 aa10.7□□□□□ -0.7
SNX27-204ENST00000458013 FRYQ5TBA9 3013 aa10.7□□□□□ -0.7
SNX27-204ENST00000458013 NBEAL1Q6ZS30 2694 aa10.68□□□□□ -0.7
SNX27-204ENST00000458013 REV3LO60673 3130 aa10.68□□□□□ -0.7
SNX27-204ENST00000458013 FLG2Q5D862 2391 aaPredicted RBP10.67□□□□□ -0.7
SNX27-204ENST00000458013 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
SNX27-204ENST00000458013 NBEAL2Q6ZNJ1 2754 aa10.64□□□□□ -0.71
SNX27-204ENST00000458013 DMBT1Q9UGM3 2413 aaPredicted RBP10.63□□□□□ -0.71
SNX27-204ENST00000458013 KRTAP10-8P60410 259 aa10.62□□□□□ -0.71
SNX27-204ENST00000458013 CFAP47Q6ZTR5 3102 aa10.57□□□□□ -0.72
SNX27-204ENST00000458013 KALRNO60229 2985 aa10.56□□□□□ -0.72
SNX27-204ENST00000458013 SPTBN5Q9NRC6 3674 aaKnown RBP10.56□□□□□ -0.72
SNX27-204ENST00000458013 TRANK1O15050 2925 aa10.55□□□□□ -0.72
SNX27-204ENST00000458013 CENPEQ02224 2701 aa10.54□□□□□ -0.72
SNX27-204ENST00000458013 LAMA1P25391 3075 aa10.5□□□□□ -0.73
SNX27-204ENST00000458013 UNC79Q9P2D8 2635 aa10.49□□□□□ -0.73
SNX27-204ENST00000458013 LRBAP50851 2863 aa10.45□□□□□ -0.74
SNX27-204ENST00000458013 XP32Q5T750 250 aa10.45□□□□□ -0.74
SNX27-204ENST00000458013 TEP1Q99973 2627 aaKnown RBP10.43□□□□□ -0.74
SNX27-204ENST00000458013 H0YAA0 97 aa10.42□□□□□ -0.74
SNX27-204ENST00000458013 SPEGQ15772 3267 aa10.41□□□□□ -0.74
SNX27-204ENST00000458013 USP34Q70CQ2 3546 aa10.4□□□□□ -0.75
SNX27-204ENST00000458013 STAB1Q9NY15 2570 aa10.38□□□□□ -0.75
SNX27-204ENST00000458013 COL6A5A8TX70 2615 aa10.34□□□□□ -0.75
SNX27-204ENST00000458013 CRYBG3Q68DQ2 2970 aa10.32□□□□□ -0.76
SNX27-204ENST00000458013 KRTAP1-4P0C5Y4 121 aa10.32□□□□□ -0.76
SNX27-204ENST00000458013 DSPP15924 2871 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms