RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 RAB37Q96AX2 223 aa5.87□□□□□ -1.47
ATG4A-206ENST00000457035 SPRR1BP22528 89 aa5.86□□□□□ -1.47
ATG4A-206ENST00000457035 VAMP3Q15836 100 aa5.86□□□□□ -1.47
ATG4A-206ENST00000457035 H7C2G1 150 aa5.85□□□□□ -1.47
ATG4A-206ENST00000457035 LINC00575Q6W349 94 aa5.85□□□□□ -1.47
ATG4A-206ENST00000457035 KRTAP3-1Q9BYR8 98 aa5.85□□□□□ -1.47
ATG4A-206ENST00000457035 PRO1854Q9UHT4 67 aa5.85□□□□□ -1.47
ATG4A-206ENST00000457035 LINC01547P58512 204 aaPredicted RBP5.84□□□□□ -1.47
ATG4A-206ENST00000457035 BVES-AS1Q5T3Y7 98 aa5.83□□□□□ -1.48
ATG4A-206ENST00000457035 SSBP3-AS1Q7Z2R9 100 aa5.83□□□□□ -1.48
ATG4A-206ENST00000457035 LINC00304Q8N9R0 145 aa5.83□□□□□ -1.48
ATG4A-206ENST00000457035 NHP2Q9NX24 153 aaKnown RBP5.83□□□□□ -1.48
ATG4A-206ENST00000457035 IGLV5-48A0A075B6I7 105 aa5.82□□□□□ -1.48
ATG4A-206ENST00000457035 IGLV9-49A0A0B4J1Y8 123 aa5.82□□□□□ -1.48
ATG4A-206ENST00000457035 TEX49A0A1B0GTD5 131 aa5.82□□□□□ -1.48
ATG4A-206ENST00000457035 hADV29S1A0JD25 119 aa5.82□□□□□ -1.48
ATG4A-206ENST00000457035 SLC25A20O43772 301 aa5.82□□□□□ -1.48
ATG4A-206ENST00000457035 TSPAN13O95857 204 aa5.82□□□□□ -1.48
ATG4A-206ENST00000457035 DEFB105AQ8NG35 78 aa5.82□□□□□ -1.48
ATG4A-206ENST00000457035 LRP2P98164 4655 aa5.81□□□□□ -1.48
ATG4A-206ENST00000457035 H0YGX0 51 aa5.81□□□□□ -1.48
ATG4A-206ENST00000457035 K7ERJ3 54 aa5.81□□□□□ -1.48
ATG4A-206ENST00000457035 CTAG1AP78358 180 aa5.81□□□□□ -1.48
ATG4A-206ENST00000457035 MOBPQ13875 183 aa5.81□□□□□ -1.48
ATG4A-206ENST00000457035 SMIM29Q86T20 159 aa5.81□□□□□ -1.48
ATG4A-206ENST00000457035 Q8N377 158 aa5.81□□□□□ -1.48
ATG4A-206ENST00000457035 Q8NBF4 154 aa5.81□□□□□ -1.48
ATG4A-206ENST00000457035 Q1RN00 199 aa5.79□□□□□ -1.48
ATG4A-206ENST00000457035 SPAG11AQ6PDA7 123 aa5.79□□□□□ -1.48
ATG4A-206ENST00000457035 Q6ZQY7 126 aa5.79□□□□□ -1.48
ATG4A-206ENST00000457035 FAM218AQ96MZ4 157 aa5.79□□□□□ -1.48
ATG4A-206ENST00000457035 LAMTOR3Q9UHA4 124 aa5.79□□□□□ -1.48
ATG4A-206ENST00000457035 LPAP08519 4548 aa5.78□□□□□ -1.48
ATG4A-206ENST00000457035 TSTD3H0UI37 97 aa5.78□□□□□ -1.48
ATG4A-206ENST00000457035 TRIAP1O43715 76 aa5.78□□□□□ -1.48
ATG4A-206ENST00000457035 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.78□□□□□ -1.48
ATG4A-206ENST00000457035 C9orf153Q5TBE3 101 aa5.77□□□□□ -1.49
ATG4A-206ENST00000457035 SPINK1P00995 79 aa5.76□□□□□ -1.49
ATG4A-206ENST00000457035 A0A1B0GX51 115 aa5.75□□□□□ -1.49
ATG4A-206ENST00000457035 M0R143 59 aa5.75□□□□□ -1.49
ATG4A-206ENST00000457035 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
ATG4A-206ENST00000457035 RNF213Q63HN8 5207 aa5.75□□□□□ -1.49
ATG4A-206ENST00000457035 SNCGO76070 127 aa5.74□□□□□ -1.49
ATG4A-206ENST00000457035 PSMB2P49721 201 aa5.74□□□□□ -1.49
ATG4A-206ENST00000457035 PPDPFLQ8WWR9 84 aa5.74□□□□□ -1.49
ATG4A-206ENST00000457035 CLEC2BQ92478 149 aa5.74□□□□□ -1.49
ATG4A-206ENST00000457035 COX6CP09669 75 aa5.73□□□□□ -1.49
ATG4A-206ENST00000457035 RPS29P62273 56 aaKnown RBP5.73□□□□□ -1.49
ATG4A-206ENST00000457035 OCIAD2Q56VL3 154 aa5.73□□□□□ -1.49
ATG4A-206ENST00000457035 PRR4Q16378 134 aa5.72□□□□□ -1.49
ATG4A-206ENST00000457035 RETNLBQ9BQ08 111 aa5.72□□□□□ -1.49
ATG4A-206ENST00000457035 IGLV8-61A0A075B6I0 122 aa5.71□□□□□ -1.5
ATG4A-206ENST00000457035 A0A0G2JQZ4 141 aa5.71□□□□□ -1.5
ATG4A-206ENST00000457035 SNHG12Q9BXW3 62 aa5.71□□□□□ -1.5
ATG4A-206ENST00000457035 SCGB1C2P0DMR2 95 aa5.7□□□□□ -1.5
ATG4A-206ENST00000457035 CD164Q04900 197 aa5.7□□□□□ -1.5
ATG4A-206ENST00000457035 HRCT1Q6UXD1 115 aa5.7□□□□□ -1.5
ATG4A-206ENST00000457035 F8WEM9 126 aa5.69□□□□□ -1.5
ATG4A-206ENST00000457035 NDUFV3P56181 108 aaKnown RBP5.68□□□□□ -1.5
ATG4A-206ENST00000457035 NAA38Q9BRA0 125 aaKnown RBP5.68□□□□□ -1.5
ATG4A-206ENST00000457035 LST1O00453 97 aa5.67□□□□□ -1.5
ATG4A-206ENST00000457035 TRACP01848 142 aa5.67□□□□□ -1.5
ATG4A-206ENST00000457035 BATFQ16520 125 aa5.67□□□□□ -1.5
ATG4A-206ENST00000457035 Q6JHZ5 121 aa5.67□□□□□ -1.5
ATG4A-206ENST00000457035 IGFL1Q6UW32 110 aa5.67□□□□□ -1.5
ATG4A-206ENST00000457035 IGLV7-46A0A075B6I9 117 aa5.66□□□□□ -1.5
ATG4A-206ENST00000457035 DNAL4O96015 105 aa5.66□□□□□ -1.5
ATG4A-206ENST00000457035 FABP2P12104 132 aa5.66□□□□□ -1.5
ATG4A-206ENST00000457035 Q5XG85 94 aa5.66□□□□□ -1.5
ATG4A-206ENST00000457035 ORMDL1Q9P0S3 153 aa5.66□□□□□ -1.5
ATG4A-206ENST00000457035 H3BQ85 93 aa5.65□□□□□ -1.5
ATG4A-206ENST00000457035 H3BUT2 72 aa5.65□□□□□ -1.5
ATG4A-206ENST00000457035 FP248Q71RG6 208 aaPredicted RBP5.65□□□□□ -1.5
ATG4A-206ENST00000457035 H3BMG7 143 aa5.64□□□□□ -1.51
ATG4A-206ENST00000457035 TMEM256-PLSCR3K7ERE1 68 aa5.64□□□□□ -1.51
ATG4A-206ENST00000457035 TCL1BO95988 128 aa5.64□□□□□ -1.51
ATG4A-206ENST00000457035 LIMD2Q9BT23 127 aa5.64□□□□□ -1.51
ATG4A-206ENST00000457035 TAX1BP3O14907 124 aa5.63□□□□□ -1.51
ATG4A-206ENST00000457035 UBE2V1Q13404 147 aa5.62□□□□□ -1.51
ATG4A-206ENST00000457035 TPRXLQ17RH7 258 aa5.62□□□□□ -1.51
ATG4A-206ENST00000457035 TRBV7-7A0A0K0K1E9 115 aa5.61□□□□□ -1.51
ATG4A-206ENST00000457035 BAALC-AS2P0C853 105 aa5.61□□□□□ -1.51
ATG4A-206ENST00000457035 ATXN8Q156A1 80 aa5.61□□□□□ -1.51
ATG4A-206ENST00000457035 Q6Q795 121 aa5.61□□□□□ -1.51
ATG4A-206ENST00000457035 KRTAP13-3Q3SY46 172 aa5.6□□□□□ -1.51
ATG4A-206ENST00000457035 C1orf195Q5TG92 126 aa5.6□□□□□ -1.51
ATG4A-206ENST00000457035 MUC17Q685J3 4493 aa5.59□□□□□ -1.51
ATG4A-206ENST00000457035 TRBV20-1A0A075B6N2 111 aa5.59□□□□□ -1.51
ATG4A-206ENST00000457035 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
ATG4A-206ENST00000457035 TEN1Q86WV5 123 aa5.59□□□□□ -1.51
ATG4A-206ENST00000457035 A0A1W2PNM2 257 aa5.58□□□□□ -1.52
ATG4A-206ENST00000457035 A0A1W2PPM0 123 aa5.58□□□□□ -1.52
ATG4A-206ENST00000457035 LYRM7Q5U5X0 104 aa5.58□□□□□ -1.52
ATG4A-206ENST00000457035 ANKRD29Q8N6D5 301 aa5.58□□□□□ -1.52
ATG4A-206ENST00000457035 A0A1B0GV72 72 aa5.56□□□□□ -1.52
ATG4A-206ENST00000457035 PCP4L1A6NKN8 68 aa5.56□□□□□ -1.52
ATG4A-206ENST00000457035 RBM3P98179 157 aaKnown RBP5.56□□□□□ -1.52
ATG4A-206ENST00000457035 COL5A1-AS1Q5SY13 56 aa5.56□□□□□ -1.52
ATG4A-206ENST00000457035 TRBV7-4A0A0J9YYF1 115 aa5.55□□□□□ -1.52
ATG4A-206ENST00000457035 C9JAW5 83 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms