RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 IGKV2D-24A0A075B6R9 120 aa2.97□□□□□ -1.93
RIF1-207ENST00000454583 SCXQ7RTU7 201 aa2.97□□□□□ -1.93
RIF1-207ENST00000454583 H3BQ85 93 aa2.97□□□□□ -1.93
RIF1-207ENST00000454583 H7C2G1 150 aa2.97□□□□□ -1.93
RIF1-207ENST00000454583 COX6CP09669 75 aa2.97□□□□□ -1.93
RIF1-207ENST00000454583 TOMM7Q9P0U1 55 aa2.97□□□□□ -1.93
RIF1-207ENST00000454583 IGKV3OR2-268A0A0C4DH90 116 aa2.96□□□□□ -1.93
RIF1-207ENST00000454583 ASB16-AS1Q495Z4 193 aa2.96□□□□□ -1.93
RIF1-207ENST00000454583 C14orf177Q52M58 125 aa2.96□□□□□ -1.93
RIF1-207ENST00000454583 KRTAP19-1Q8IUB9 90 aa2.96□□□□□ -1.93
RIF1-207ENST00000454583 TMEM256-PLSCR3K7ERE1 68 aa2.96□□□□□ -1.94
RIF1-207ENST00000454583 KRTAP23-1A1A580 65 aa2.96□□□□□ -1.94
RIF1-207ENST00000454583 ERC2-IT1O76042 136 aa2.96□□□□□ -1.94
RIF1-207ENST00000454583 LINC00643Q86TS7 51 aa2.96□□□□□ -1.94
RIF1-207ENST00000454583 hADV29S1A0JD25 119 aa2.95□□□□□ -1.94
RIF1-207ENST00000454583 ORMDL1Q9P0S3 153 aa2.95□□□□□ -1.94
RIF1-207ENST00000454583 RPL18AQ02543 176 aaKnown RBP2.95□□□□□ -1.94
RIF1-207ENST00000454583 XAGE1AQ9HD64 81 aa2.95□□□□□ -1.94
RIF1-207ENST00000454583 KRTAP10-8P60410 259 aa2.95□□□□□ -1.94
RIF1-207ENST00000454583 A0A1B0GW54 56 aa2.94□□□□□ -1.94
RIF1-207ENST00000454583 JMJD7-PLA2G4BH0Y9G9 81 aa2.94□□□□□ -1.94
RIF1-207ENST00000454583 NDUFV3P56181 108 aaKnown RBP2.94□□□□□ -1.94
RIF1-207ENST00000454583 CAMK2N2Q96S95 79 aa2.94□□□□□ -1.94
RIF1-207ENST00000454583 Q96NJ1 140 aa2.94□□□□□ -1.94
RIF1-207ENST00000454583 CYSTM1Q9H1C7 97 aa2.94□□□□□ -1.94
RIF1-207ENST00000454583 C14orf132Q9NPU4 83 aa2.94□□□□□ -1.94
RIF1-207ENST00000454583 A0A1W2PNM2 257 aa2.93□□□□□ -1.94
RIF1-207ENST00000454583 KRTAP13-2Q52LG2 175 aa2.93□□□□□ -1.94
RIF1-207ENST00000454583 PHF5AQ7RTV0 110 aaKnown RBP2.93□□□□□ -1.94
RIF1-207ENST00000454583 MRPL55Q7Z7F7 128 aaKnown RBP2.93□□□□□ -1.94
RIF1-207ENST00000454583 DIRC1Q969H9 104 aa2.93□□□□□ -1.94
RIF1-207ENST00000454583 J3QR89 54 aa2.93□□□□□ -1.94
RIF1-207ENST00000454583 Q1RN00 199 aa2.93□□□□□ -1.94
RIF1-207ENST00000454583 VPS25Q9BRG1 176 aa2.93□□□□□ -1.94
RIF1-207ENST00000454583 BCE1O60756 84 aa2.92□□□□□ -1.94
RIF1-207ENST00000454583 COX7BP24311 80 aa2.92□□□□□ -1.94
RIF1-207ENST00000454583 UBE2DNLQ8IWF7 75 aa2.92□□□□□ -1.94
RIF1-207ENST00000454583 PSORS1C2Q9UIG4 136 aa2.92□□□□□ -1.94
RIF1-207ENST00000454583 CXCL6P80162 114 aa2.92□□□□□ -1.94
RIF1-207ENST00000454583 LRP2P98164 4655 aa2.92□□□□□ -1.94
RIF1-207ENST00000454583 Q6ZQY7 126 aa2.92□□□□□ -1.94
RIF1-207ENST00000454583 LINC00474Q9P2X8 69 aa2.91□□□□□ -1.94
RIF1-207ENST00000454583 ATP5EP2Q5VTU8 51 aa2.91□□□□□ -1.94
RIF1-207ENST00000454583 Q8N1X5 172 aa2.91□□□□□ -1.94
RIF1-207ENST00000454583 IGKV4-1P06312 121 aa2.9□□□□□ -1.94
RIF1-207ENST00000454583 SEC61GP60059 68 aa2.9□□□□□ -1.94
RIF1-207ENST00000454583 ST20-AS1Q8NBB2 130 aa2.9□□□□□ -1.94
RIF1-207ENST00000454583 DHRS4-AS1Q9P1J3 65 aa2.9□□□□□ -1.94
RIF1-207ENST00000454583 CRYGAP11844 174 aa2.9□□□□□ -1.95
RIF1-207ENST00000454583 Q6ZVQ6 151 aa2.9□□□□□ -1.95
RIF1-207ENST00000454583 IGLV7-43P04211 117 aa2.89□□□□□ -1.95
RIF1-207ENST00000454583 PDE6GP18545 87 aa2.89□□□□□ -1.95
RIF1-207ENST00000454583 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.89□□□□□ -1.95
RIF1-207ENST00000454583 DSCR10P59022 87 aa2.89□□□□□ -1.95
RIF1-207ENST00000454583 Q5XG85 94 aa2.89□□□□□ -1.95
RIF1-207ENST00000454583 REG3GQ6UW15 175 aa2.89□□□□□ -1.95
RIF1-207ENST00000454583 KRTAP3-1Q9BYR8 98 aa2.89□□□□□ -1.95
RIF1-207ENST00000454583 KRTAP29-1A8MX34 341 aaPredicted RBP2.89□□□□□ -1.95
RIF1-207ENST00000454583 CCDC179H3BU77 68 aa2.88□□□□□ -1.95
RIF1-207ENST00000454583 ZCCHC13Q8WW36 166 aaKnown RBP2.88□□□□□ -1.95
RIF1-207ENST00000454583 A0A087X002 238 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 RPL37AP8A6NKH3 93 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 RBM3P98179 157 aaKnown RBP2.87□□□□□ -1.95
RIF1-207ENST00000454583 KRTAP13-3Q3SY46 172 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 LINC00472Q9H8W2 130 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 GAGE2EQ4V326 116 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 Q8NBF4 154 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 OCR1Q9BZK8 76 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 GAGE2DQ9UEU5 116 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 ZNF861PO60384 105 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 S100A7L2Q5SY68 101 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 IGFL1Q6UW32 110 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 PKIGQ9Y2B9 76 aa2.87□□□□□ -1.95
RIF1-207ENST00000454583 UBR4Q5T4S7 5183 aa2.86□□□□□ -1.95
RIF1-207ENST00000454583 KRTAP9-2Q9BYQ4 174 aa2.86□□□□□ -1.95
RIF1-207ENST00000454583 KRTAP19-2Q3LHN2 52 aa2.86□□□□□ -1.95
RIF1-207ENST00000454583 RPL37AP61513 92 aaKnown RBP2.86□□□□□ -1.95
RIF1-207ENST00000454583 FAM229BQ4G0N7 80 aa2.86□□□□□ -1.95
RIF1-207ENST00000454583 SPINK6Q6UWN8 80 aa2.86□□□□□ -1.95
RIF1-207ENST00000454583 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
RIF1-207ENST00000454583 RPS29P62273 56 aaKnown RBP2.85□□□□□ -1.95
RIF1-207ENST00000454583 GAGE2AQ6NT46 116 aa2.85□□□□□ -1.95
RIF1-207ENST00000454583 FAM19A5Q7Z5A7 132 aaPredicted RBP2.85□□□□□ -1.95
RIF1-207ENST00000454583 FAM19A1Q7Z5A9 133 aa2.85□□□□□ -1.95
RIF1-207ENST00000454583 OR13C6PQ8NH95 151 aa2.85□□□□□ -1.95
RIF1-207ENST00000454583 C3orf22Q8N5N4 141 aa2.85□□□□□ -1.95
RIF1-207ENST00000454583 A0A087WVE0 104 aa2.85□□□□□ -1.95
RIF1-207ENST00000454583 DNAL4O96015 105 aa2.85□□□□□ -1.95
RIF1-207ENST00000454583 GAGE2BQ13066 116 aa2.85□□□□□ -1.95
RIF1-207ENST00000454583 SNCGO76070 127 aa2.84□□□□□ -1.95
RIF1-207ENST00000454583 COX7CP15954 63 aa2.84□□□□□ -1.95
RIF1-207ENST00000454583 HAMPP81172 84 aa2.84□□□□□ -1.95
RIF1-207ENST00000454583 KLKP1Q107X0 134 aa2.84□□□□□ -1.95
RIF1-207ENST00000454583 MUC2Q02817 5179 aa2.84□□□□□ -1.96
RIF1-207ENST00000454583 PSCAO43653 123 aa2.84□□□□□ -1.96
RIF1-207ENST00000454583 FAM236AA0A1B0GUQ0 79 aa2.83□□□□□ -1.96
RIF1-207ENST00000454583 FAM236BA0A1B0GV22 79 aa2.83□□□□□ -1.96
RIF1-207ENST00000454583 OXTP01178 125 aa2.83□□□□□ -1.96
RIF1-207ENST00000454583 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.82□□□□□ -1.96
RIF1-207ENST00000454583 Q5VSD8 79 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms