RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 RPS29P62273 56 aaKnown RBP16■□□□□ 0.15
SMARCC1-203ENST00000454240 A0A1B0GX51 115 aa15.98■□□□□ 0.15
SMARCC1-203ENST00000454240 M0R143 59 aa15.98■□□□□ 0.15
SMARCC1-203ENST00000454240 RETNLBQ9BQ08 111 aa15.98■□□□□ 0.15
SMARCC1-203ENST00000454240 PSMB2P49721 201 aa15.97■□□□□ 0.15
SMARCC1-203ENST00000454240 PPDPFLQ8WWR9 84 aa15.97■□□□□ 0.15
SMARCC1-203ENST00000454240 LRP2P98164 4655 aa15.96■□□□□ 0.15
SMARCC1-203ENST00000454240 LPAP08519 4548 aa15.95■□□□□ 0.14
SMARCC1-203ENST00000454240 OCIAD2Q56VL3 154 aa15.94■□□□□ 0.14
SMARCC1-203ENST00000454240 COX6CP09669 75 aa15.92■□□□□ 0.14
SMARCC1-203ENST00000454240 CLEC2BQ92478 149 aa15.92■□□□□ 0.14
SMARCC1-203ENST00000454240 F8WEM9 126 aa15.9■□□□□ 0.14
SMARCC1-203ENST00000454240 CD164Q04900 197 aa15.89■□□□□ 0.13
SMARCC1-203ENST00000454240 HRCT1Q6UXD1 115 aa15.88■□□□□ 0.13
SMARCC1-203ENST00000454240 IGLV8-61A0A075B6I0 122 aa15.87■□□□□ 0.13
SMARCC1-203ENST00000454240 SNHG12Q9BXW3 62 aa15.87■□□□□ 0.13
SMARCC1-203ENST00000454240 A0A0G2JQZ4 141 aa15.86■□□□□ 0.13
SMARCC1-203ENST00000454240 FP248Q71RG6 208 aaPredicted RBP15.83■□□□□ 0.12
SMARCC1-203ENST00000454240 UBR4Q5T4S7 5183 aa15.82■□□□□ 0.12
SMARCC1-203ENST00000454240 GHRHP01286 108 aa15.82■□□□□ 0.12
SMARCC1-203ENST00000454240 IGLV7-46A0A075B6I9 117 aa15.81■□□□□ 0.12
SMARCC1-203ENST00000454240 Q6JHZ5 121 aa15.81■□□□□ 0.12
SMARCC1-203ENST00000454240 LIMD2Q9BT23 127 aa15.8■□□□□ 0.12
SMARCC1-203ENST00000454240 DNAL4O96015 105 aa15.79■□□□□ 0.12
SMARCC1-203ENST00000454240 SCGB1C2P0DMR2 95 aa15.79■□□□□ 0.12
SMARCC1-203ENST00000454240 NDUFV3P56181 108 aaKnown RBP15.77■□□□□ 0.12
SMARCC1-203ENST00000454240 IGFL1Q6UW32 110 aa15.77■□□□□ 0.12
SMARCC1-203ENST00000454240 ORMDL1Q9P0S3 153 aa15.75■□□□□ 0.11
SMARCC1-203ENST00000454240 LST1O00453 97 aa15.74■□□□□ 0.11
SMARCC1-203ENST00000454240 TRACP01848 142 aa15.74■□□□□ 0.11
SMARCC1-203ENST00000454240 FABP2P12104 132 aa15.74■□□□□ 0.11
SMARCC1-203ENST00000454240 Q5XG85 94 aa15.74■□□□□ 0.11
SMARCC1-203ENST00000454240 H3BUT2 72 aa15.73■□□□□ 0.11
SMARCC1-203ENST00000454240 BATFQ16520 125 aa15.73■□□□□ 0.11
SMARCC1-203ENST00000454240 TPRXLQ17RH7 258 aa15.73■□□□□ 0.11
SMARCC1-203ENST00000454240 H3BQ85 93 aa15.72■□□□□ 0.11
SMARCC1-203ENST00000454240 NAA38Q9BRA0 125 aaKnown RBP15.7■□□□□ 0.1
SMARCC1-203ENST00000454240 TMEM256-PLSCR3K7ERE1 68 aa15.68■□□□□ 0.1
SMARCC1-203ENST00000454240 H3BMG7 143 aa15.66■□□□□ 0.1
SMARCC1-203ENST00000454240 TRBV7-7A0A0K0K1E9 115 aa15.63■□□□□ 0.09
SMARCC1-203ENST00000454240 TCL1BO95988 128 aa15.62■□□□□ 0.09
SMARCC1-203ENST00000454240 KRTAP13-3Q3SY46 172 aa15.62■□□□□ 0.09
SMARCC1-203ENST00000454240 UBE2V1Q13404 147 aa15.6■□□□□ 0.09
SMARCC1-203ENST00000454240 ATXN8Q156A1 80 aa15.59■□□□□ 0.09
SMARCC1-203ENST00000454240 Q6Q795 121 aa15.59■□□□□ 0.09
SMARCC1-203ENST00000454240 CDIP1Q9H305 208 aa15.59■□□□□ 0.09
SMARCC1-203ENST00000454240 C1orf195Q5TG92 126 aa15.58■□□□□ 0.08
SMARCC1-203ENST00000454240 TAX1BP3O14907 124 aa15.56■□□□□ 0.08
SMARCC1-203ENST00000454240 LYRM7Q5U5X0 104 aa15.56■□□□□ 0.08
SMARCC1-203ENST00000454240 C9orf118A6NHY6 69 aa15.55■□□□□ 0.08
SMARCC1-203ENST00000454240 ASB16-AS1Q495Z4 193 aa15.55■□□□□ 0.08
SMARCC1-203ENST00000454240 TEN1Q86WV5 123 aa15.55■□□□□ 0.08
SMARCC1-203ENST00000454240 BAALC-AS2P0C853 105 aa15.53■□□□□ 0.08
SMARCC1-203ENST00000454240 TRBV20-1A0A075B6N2 111 aa15.51■□□□□ 0.07
SMARCC1-203ENST00000454240 ANKRD29Q8N6D5 301 aa15.5■□□□□ 0.07
SMARCC1-203ENST00000454240 A0A1B0GV72 72 aa15.49■□□□□ 0.07
SMARCC1-203ENST00000454240 A0A1W2PNM2 257 aa15.48■□□□□ 0.07
SMARCC1-203ENST00000454240 A0A1W2PPM0 123 aa15.45■□□□□ 0.06
SMARCC1-203ENST00000454240 RNF213Q63HN8 5207 aa15.44■□□□□ 0.06
SMARCC1-203ENST00000454240 SS18L2Q9UHA2 77 aa15.43■□□□□ 0.06
SMARCC1-203ENST00000454240 RBM3P98179 157 aaKnown RBP15.42■□□□□ 0.06
SMARCC1-203ENST00000454240 A0A087WSZ3 146 aa15.41■□□□□ 0.06
SMARCC1-203ENST00000454240 TRBV7-4A0A0J9YYF1 115 aa15.41■□□□□ 0.06
SMARCC1-203ENST00000454240 MUC17Q685J3 4493 aa15.4■□□□□ 0.06
SMARCC1-203ENST00000454240 COL5A1-AS1Q5SY13 56 aa15.38■□□□□ 0.05
SMARCC1-203ENST00000454240 C9JAW5 83 aa15.37■□□□□ 0.05
SMARCC1-203ENST00000454240 CCKP06307 115 aa15.36■□□□□ 0.05
SMARCC1-203ENST00000454240 DSCR8Q96T75 97 aa15.36■□□□□ 0.05
SMARCC1-203ENST00000454240 XP32Q5T750 250 aa15.35■□□□□ 0.05
SMARCC1-203ENST00000454240 C9orf92A6NGG3 77 aa15.34■□□□□ 0.05
SMARCC1-203ENST00000454240 PCP4L1A6NKN8 68 aa15.34■□□□□ 0.05
SMARCC1-203ENST00000454240 JMJD7-PLA2G4BH0Y9G9 81 aa15.32■□□□□ 0.04
SMARCC1-203ENST00000454240 Q96NJ1 140 aa15.28■□□□□ 0.04
SMARCC1-203ENST00000454240 H3BT86 120 aa15.25■□□□□ 0.03
SMARCC1-203ENST00000454240 VPS25Q9BRG1 176 aa15.25■□□□□ 0.03
SMARCC1-203ENST00000454240 SPCS1Q9Y6A9 102 aa15.25■□□□□ 0.03
SMARCC1-203ENST00000454240 OBSCN-AS1Q96MR7 158 aa15.24■□□□□ 0.03
SMARCC1-203ENST00000454240 MUC2Q02817 5179 aa15.24■□□□□ 0.03
SMARCC1-203ENST00000454240 LOC110117498A0A087WWA1 95 aa15.22■□□□□ 0.03
SMARCC1-203ENST00000454240 SEC61BP60468 96 aaKnown RBP15.21■□□□□ 0.03
SMARCC1-203ENST00000454240 Q6ZQT0 140 aa15.21■□□□□ 0.03
SMARCC1-203ENST00000454240 MTURNQ8N3F0 131 aa15.21■□□□□ 0.03
SMARCC1-203ENST00000454240 PDE6GP18545 87 aa15.18■□□□□ 0.02
SMARCC1-203ENST00000454240 C14orf132Q9NPU4 83 aa15.17■□□□□ 0.02
SMARCC1-203ENST00000454240 LINC00472Q9H8W2 130 aa15.16■□□□□ 0.02
SMARCC1-203ENST00000454240 C21orf62-AS1Q17RA5 79 aa15.15■□□□□ 0.02
SMARCC1-203ENST00000454240 A0A1B0GW54 56 aa15.11■□□□□ 0.01
SMARCC1-203ENST00000454240 K7EP34 96 aa15.11■□□□□ 0.01
SMARCC1-203ENST00000454240 IGKV4-1P06312 121 aa15.1■□□□□ 0.01
SMARCC1-203ENST00000454240 SIGMAR1Q99720 223 aa15.08■□□□□ 0
SMARCC1-203ENST00000454240 SMCPP49901 116 aaPredicted RBP15.07■□□□□ 0
SMARCC1-203ENST00000454240 DEFB116Q30KQ4 102 aa15.07■□□□□ 0
SMARCC1-203ENST00000454240 RPL37P61927 97 aaKnown RBP15.06■□□□□ 0
SMARCC1-203ENST00000454240 PRO0461Q9UI25 63 aa15.04■□□□□ -0
SMARCC1-203ENST00000454240 KRTAP4-1Q9BYQ7 146 aa15.03■□□□□ -0
SMARCC1-203ENST00000454240 PCOTHQ58A44 107 aa15.02■□□□□ -0
SMARCC1-203ENST00000454240 GTF2H5Q6ZYL4 71 aa14.98□□□□□ -0.01
SMARCC1-203ENST00000454240 DSCR10P59022 87 aa14.96□□□□□ -0.01
SMARCC1-203ENST00000454240 Q75L30 129 aa14.96□□□□□ -0.01
SMARCC1-203ENST00000454240 J3KT08 172 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms