RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 LAMTOR3Q9UHA4 124 aa14.01□□□□□ -0.17
CPSF4-207ENST00000451876 Q8NBF4 154 aa14□□□□□ -0.17
CPSF4-207ENST00000451876 LINC00304Q8N9R0 145 aa13.98□□□□□ -0.17
CPSF4-207ENST00000451876 TAX1BP3O14907 124 aa13.97□□□□□ -0.17
CPSF4-207ENST00000451876 H3BUT2 72 aa13.96□□□□□ -0.17
CPSF4-207ENST00000451876 LST1O00453 97 aa13.96□□□□□ -0.17
CPSF4-207ENST00000451876 SSBP3-AS1Q7Z2R9 100 aa13.95□□□□□ -0.18
CPSF4-207ENST00000451876 DNAL4O96015 105 aa13.94□□□□□ -0.18
CPSF4-207ENST00000451876 OCIAD2Q56VL3 154 aa13.94□□□□□ -0.18
CPSF4-207ENST00000451876 PPDPFLQ8WWR9 84 aa13.93□□□□□ -0.18
CPSF4-207ENST00000451876 C9orf118A6NHY6 69 aa13.92□□□□□ -0.18
CPSF4-207ENST00000451876 TCL1BO95988 128 aa13.92□□□□□ -0.18
CPSF4-207ENST00000451876 TRACP01848 142 aa13.91□□□□□ -0.18
CPSF4-207ENST00000451876 ORMDL1Q9P0S3 153 aa13.89□□□□□ -0.19
CPSF4-207ENST00000451876 F8WEM9 126 aa13.87□□□□□ -0.19
CPSF4-207ENST00000451876 COL5A1-AS1Q5SY13 56 aa13.87□□□□□ -0.19
CPSF4-207ENST00000451876 A0A0G2JQZ4 141 aa13.86□□□□□ -0.19
CPSF4-207ENST00000451876 FABP2P12104 132 aa13.86□□□□□ -0.19
CPSF4-207ENST00000451876 A0A1W2PPM0 123 aa13.85□□□□□ -0.19
CPSF4-207ENST00000451876 ATXN8Q156A1 80 aa13.85□□□□□ -0.19
CPSF4-207ENST00000451876 LYRM7Q5U5X0 104 aa13.85□□□□□ -0.19
CPSF4-207ENST00000451876 SPAG11AQ6PDA7 123 aa13.85□□□□□ -0.19
CPSF4-207ENST00000451876 C4orf48Q5BLP8 95 aa13.84□□□□□ -0.19
CPSF4-207ENST00000451876 GHRHP01286 108 aa13.83□□□□□ -0.2
CPSF4-207ENST00000451876 NDUFV3P56181 108 aaKnown RBP13.83□□□□□ -0.2
CPSF4-207ENST00000451876 IGLV8-61A0A075B6I0 122 aa13.82□□□□□ -0.2
CPSF4-207ENST00000451876 SPINK1P00995 79 aa13.8□□□□□ -0.2
CPSF4-207ENST00000451876 HRCT1Q6UXD1 115 aa13.8□□□□□ -0.2
CPSF4-207ENST00000451876 TRBV20-1A0A075B6N2 111 aa13.79□□□□□ -0.2
CPSF4-207ENST00000451876 TMEM256-PLSCR3K7ERE1 68 aa13.79□□□□□ -0.2
CPSF4-207ENST00000451876 HMCN2Q8NDA2 5059 aa13.78□□□□□ -0.2
CPSF4-207ENST00000451876 IGFL1Q6UW32 110 aa13.78□□□□□ -0.2
CPSF4-207ENST00000451876 H3BQ85 93 aa13.76□□□□□ -0.21
CPSF4-207ENST00000451876 H3BMG7 143 aa13.75□□□□□ -0.21
CPSF4-207ENST00000451876 Q6JHZ5 121 aa13.75□□□□□ -0.21
CPSF4-207ENST00000451876 RETNLBQ9BQ08 111 aa13.75□□□□□ -0.21
CPSF4-207ENST00000451876 A0A1B0GV72 72 aa13.74□□□□□ -0.21
CPSF4-207ENST00000451876 BAALC-AS2P0C853 105 aa13.74□□□□□ -0.21
CPSF4-207ENST00000451876 RPS29P62273 56 aaKnown RBP13.73□□□□□ -0.21
CPSF4-207ENST00000451876 CD164Q04900 197 aa13.72□□□□□ -0.21
CPSF4-207ENST00000451876 UBE2V1Q13404 147 aa13.72□□□□□ -0.21
CPSF4-207ENST00000451876 C9JAW5 83 aa13.71□□□□□ -0.22
CPSF4-207ENST00000451876 SPCS1Q9Y6A9 102 aa13.7□□□□□ -0.22
CPSF4-207ENST00000451876 ANKRD29Q8N6D5 301 aa13.68□□□□□ -0.22
CPSF4-207ENST00000451876 MTURNQ8N3F0 131 aa13.66□□□□□ -0.22
CPSF4-207ENST00000451876 PRR4Q16378 134 aa13.64□□□□□ -0.23
CPSF4-207ENST00000451876 LIMD2Q9BT23 127 aa13.63□□□□□ -0.23
CPSF4-207ENST00000451876 TRBV7-7A0A0K0K1E9 115 aa13.61□□□□□ -0.23
CPSF4-207ENST00000451876 K7EP34 96 aa13.59□□□□□ -0.23
CPSF4-207ENST00000451876 A0A1W2PNM2 257 aa13.57□□□□□ -0.24
CPSF4-207ENST00000451876 RBM3P98179 157 aaKnown RBP13.57□□□□□ -0.24
CPSF4-207ENST00000451876 Q5XG85 94 aa13.57□□□□□ -0.24
CPSF4-207ENST00000451876 Q6Q795 121 aa13.57□□□□□ -0.24
CPSF4-207ENST00000451876 LPAP08519 4548 aa13.57□□□□□ -0.24
CPSF4-207ENST00000451876 TRBV7-4A0A0J9YYF1 115 aa13.57□□□□□ -0.24
CPSF4-207ENST00000451876 H3BT86 120 aa13.57□□□□□ -0.24
CPSF4-207ENST00000451876 TEN1Q86WV5 123 aa13.57□□□□□ -0.24
CPSF4-207ENST00000451876 JMJD7-PLA2G4BH0Y9G9 81 aa13.52□□□□□ -0.25
CPSF4-207ENST00000451876 DSCR8Q96T75 97 aa13.52□□□□□ -0.25
CPSF4-207ENST00000451876 CCKP06307 115 aa13.51□□□□□ -0.25
CPSF4-207ENST00000451876 FP248Q71RG6 208 aaPredicted RBP13.51□□□□□ -0.25
CPSF4-207ENST00000451876 IGLV7-46A0A075B6I9 117 aa13.5□□□□□ -0.25
CPSF4-207ENST00000451876 SMCPP49901 116 aaPredicted RBP13.5□□□□□ -0.25
CPSF4-207ENST00000451876 LRP2P98164 4655 aa13.5□□□□□ -0.25
CPSF4-207ENST00000451876 OBSCN-AS1Q96MR7 158 aa13.5□□□□□ -0.25
CPSF4-207ENST00000451876 A0A087WSZ3 146 aa13.49□□□□□ -0.25
CPSF4-207ENST00000451876 PRO0461Q9UI25 63 aa13.49□□□□□ -0.25
CPSF4-207ENST00000451876 C1orf195Q5TG92 126 aa13.48□□□□□ -0.25
CPSF4-207ENST00000451876 GTF2H5Q6ZYL4 71 aa13.47□□□□□ -0.25
CPSF4-207ENST00000451876 C14orf132Q9NPU4 83 aa13.47□□□□□ -0.25
CPSF4-207ENST00000451876 VPS25Q9BRG1 176 aa13.46□□□□□ -0.25
CPSF4-207ENST00000451876 ASB16-AS1Q495Z4 193 aa13.45□□□□□ -0.26
CPSF4-207ENST00000451876 Q6ZQT0 140 aa13.44□□□□□ -0.26
CPSF4-207ENST00000451876 LOC110117498A0A087WWA1 95 aa13.42□□□□□ -0.26
CPSF4-207ENST00000451876 SS18L2Q9UHA2 77 aa13.42□□□□□ -0.26
CPSF4-207ENST00000451876 TPRXLQ17RH7 258 aa13.4□□□□□ -0.26
CPSF4-207ENST00000451876 KRTAP13-3Q3SY46 172 aa13.36□□□□□ -0.27
CPSF4-207ENST00000451876 PDE6GP18545 87 aa13.35□□□□□ -0.27
CPSF4-207ENST00000451876 UBR4Q5T4S7 5183 aa13.35□□□□□ -0.27
CPSF4-207ENST00000451876 Q96NJ1 140 aa13.35□□□□□ -0.27
CPSF4-207ENST00000451876 F8W1H4 67 aa13.32□□□□□ -0.28
CPSF4-207ENST00000451876 A0A1B0GV90 55 aa13.31□□□□□ -0.28
CPSF4-207ENST00000451876 CDIP1Q9H305 208 aa13.28□□□□□ -0.28
CPSF4-207ENST00000451876 C9orf92A6NGG3 77 aa13.24□□□□□ -0.29
CPSF4-207ENST00000451876 LINC00472Q9H8W2 130 aa13.24□□□□□ -0.29
CPSF4-207ENST00000451876 A0A1B0GW54 56 aa13.24□□□□□ -0.29
CPSF4-207ENST00000451876 DEFB116Q30KQ4 102 aa13.24□□□□□ -0.29
CPSF4-207ENST00000451876 ETDBQ3ZM63 59 aa13.24□□□□□ -0.29
CPSF4-207ENST00000451876 C21orf62-AS1Q17RA5 79 aa13.22□□□□□ -0.29
CPSF4-207ENST00000451876 IGKV4-1P06312 121 aa13.18□□□□□ -0.3
CPSF4-207ENST00000451876 SIGMAR1Q99720 223 aa13.18□□□□□ -0.3
CPSF4-207ENST00000451876 XP32Q5T750 250 aa13.17□□□□□ -0.3
CPSF4-207ENST00000451876 NREPQ16612 68 aa13.1□□□□□ -0.31
CPSF4-207ENST00000451876 J3KT08 172 aa13.05□□□□□ -0.32
CPSF4-207ENST00000451876 RNF213Q63HN8 5207 aa13.03□□□□□ -0.32
CPSF4-207ENST00000451876 DSCR10P59022 87 aa13.03□□□□□ -0.32
CPSF4-207ENST00000451876 LINC00846Q9NV44 126 aa13.03□□□□□ -0.32
CPSF4-207ENST00000451876 Q6ZVQ6 151 aa13.02□□□□□ -0.32
CPSF4-207ENST00000451876 MUC17Q685J3 4493 aa13.02□□□□□ -0.33
CPSF4-207ENST00000451876 IGHV6-1A0A0B4J1U7 121 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms