RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 PRO1933Q9H354 126 aa8.17□□□□□ -1.1
COL3A1-203ENST00000450867 A0A1B0GX51 115 aa8.16□□□□□ -1.1
COL3A1-203ENST00000450867 CD164Q04900 197 aa8.16□□□□□ -1.1
COL3A1-203ENST00000450867 K7ERJ3 54 aa8.15□□□□□ -1.1
COL3A1-203ENST00000450867 TRIAP1O43715 76 aa8.15□□□□□ -1.1
COL3A1-203ENST00000450867 FP248Q71RG6 208 aaPredicted RBP8.15□□□□□ -1.1
COL3A1-203ENST00000450867 FAM218AQ96MZ4 157 aa8.15□□□□□ -1.1
COL3A1-203ENST00000450867 IGLV8-61A0A075B6I0 122 aa8.14□□□□□ -1.11
COL3A1-203ENST00000450867 OCIAD2Q56VL3 154 aa8.14□□□□□ -1.11
COL3A1-203ENST00000450867 SNCGO76070 127 aa8.13□□□□□ -1.11
COL3A1-203ENST00000450867 TPRXLQ17RH7 258 aa8.12□□□□□ -1.11
COL3A1-203ENST00000450867 IGLV7-46A0A075B6I9 117 aa8.11□□□□□ -1.11
COL3A1-203ENST00000450867 F8WEM9 126 aa8.1□□□□□ -1.11
COL3A1-203ENST00000450867 Q5XG85 94 aa8.1□□□□□ -1.11
COL3A1-203ENST00000450867 TSTD3H0UI37 97 aa8.09□□□□□ -1.11
COL3A1-203ENST00000450867 M0R143 59 aa8.09□□□□□ -1.11
COL3A1-203ENST00000450867 Q6JHZ5 121 aa8.09□□□□□ -1.11
COL3A1-203ENST00000450867 LIMD2Q9BT23 127 aa8.09□□□□□ -1.11
COL3A1-203ENST00000450867 RNF213Q63HN8 5207 aa8.08□□□□□ -1.12
COL3A1-203ENST00000450867 GHRHP01286 108 aa8.07□□□□□ -1.12
COL3A1-203ENST00000450867 COX6CP09669 75 aa8.07□□□□□ -1.12
COL3A1-203ENST00000450867 CLEC2BQ92478 149 aa8.07□□□□□ -1.12
COL3A1-203ENST00000450867 PSMB2P49721 201 aa8.06□□□□□ -1.12
COL3A1-203ENST00000450867 SNHG12Q9BXW3 62 aa8.06□□□□□ -1.12
COL3A1-203ENST00000450867 A0A0G2JQZ4 141 aa8.05□□□□□ -1.12
COL3A1-203ENST00000450867 HRCT1Q6UXD1 115 aa8.05□□□□□ -1.12
COL3A1-203ENST00000450867 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
COL3A1-203ENST00000450867 IGFL1Q6UW32 110 aa8.04□□□□□ -1.12
COL3A1-203ENST00000450867 H3BQ85 93 aa8.03□□□□□ -1.12
COL3A1-203ENST00000450867 NDUFV3P56181 108 aaKnown RBP8.02□□□□□ -1.13
COL3A1-203ENST00000450867 LST1O00453 97 aa8.01□□□□□ -1.13
COL3A1-203ENST00000450867 DNAL4O96015 105 aa8.01□□□□□ -1.13
COL3A1-203ENST00000450867 TRACP01848 142 aa8.01□□□□□ -1.13
COL3A1-203ENST00000450867 ORMDL1Q9P0S3 153 aa8□□□□□ -1.13
COL3A1-203ENST00000450867 TRBV7-7A0A0K0K1E9 115 aa7.99□□□□□ -1.13
COL3A1-203ENST00000450867 H3BUT2 72 aa7.99□□□□□ -1.13
COL3A1-203ENST00000450867 ASB16-AS1Q495Z4 193 aa7.99□□□□□ -1.13
COL3A1-203ENST00000450867 Q6Q795 121 aa7.99□□□□□ -1.13
COL3A1-203ENST00000450867 CDIP1Q9H305 208 aa7.99□□□□□ -1.13
COL3A1-203ENST00000450867 MUC17Q685J3 4493 aa7.99□□□□□ -1.13
COL3A1-203ENST00000450867 FABP2P12104 132 aa7.98□□□□□ -1.13
COL3A1-203ENST00000450867 H3BMG7 143 aa7.97□□□□□ -1.13
COL3A1-203ENST00000450867 TMEM256-PLSCR3K7ERE1 68 aa7.97□□□□□ -1.13
COL3A1-203ENST00000450867 TCL1BO95988 128 aa7.97□□□□□ -1.13
COL3A1-203ENST00000450867 SCGB1C2P0DMR2 95 aa7.97□□□□□ -1.13
COL3A1-203ENST00000450867 C1orf195Q5TG92 126 aa7.97□□□□□ -1.13
COL3A1-203ENST00000450867 UBE2V1Q13404 147 aa7.94□□□□□ -1.14
COL3A1-203ENST00000450867 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
COL3A1-203ENST00000450867 NAA38Q9BRA0 125 aaKnown RBP7.92□□□□□ -1.14
COL3A1-203ENST00000450867 ATXN8Q156A1 80 aa7.9□□□□□ -1.14
COL3A1-203ENST00000450867 BATFQ16520 125 aa7.9□□□□□ -1.14
COL3A1-203ENST00000450867 XP32Q5T750 250 aa7.9□□□□□ -1.14
COL3A1-203ENST00000450867 LYRM7Q5U5X0 104 aa7.9□□□□□ -1.14
COL3A1-203ENST00000450867 MUC2Q02817 5179 aa7.9□□□□□ -1.15
COL3A1-203ENST00000450867 A0A1W2PNM2 257 aa7.89□□□□□ -1.15
COL3A1-203ENST00000450867 SS18L2Q9UHA2 77 aa7.89□□□□□ -1.15
COL3A1-203ENST00000450867 TRBV20-1A0A075B6N2 111 aa7.87□□□□□ -1.15
COL3A1-203ENST00000450867 TRBV7-4A0A0J9YYF1 115 aa7.87□□□□□ -1.15
COL3A1-203ENST00000450867 TAX1BP3O14907 124 aa7.87□□□□□ -1.15
COL3A1-203ENST00000450867 BAALC-AS2P0C853 105 aa7.87□□□□□ -1.15
COL3A1-203ENST00000450867 ANKRD29Q8N6D5 301 aa7.87□□□□□ -1.15
COL3A1-203ENST00000450867 C9orf118A6NHY6 69 aa7.86□□□□□ -1.15
COL3A1-203ENST00000450867 A0A087WSZ3 146 aa7.84□□□□□ -1.15
COL3A1-203ENST00000450867 RBM3P98179 157 aaKnown RBP7.83□□□□□ -1.16
COL3A1-203ENST00000450867 A0A1W2PPM0 123 aa7.82□□□□□ -1.16
COL3A1-203ENST00000450867 SEC61BP60468 96 aaKnown RBP7.82□□□□□ -1.16
COL3A1-203ENST00000450867 Q96NJ1 140 aa7.82□□□□□ -1.16
COL3A1-203ENST00000450867 A0A1B0GV72 72 aa7.81□□□□□ -1.16
COL3A1-203ENST00000450867 C9orf92A6NGG3 77 aa7.81□□□□□ -1.16
COL3A1-203ENST00000450867 CCKP06307 115 aa7.81□□□□□ -1.16
COL3A1-203ENST00000450867 JMJD7-PLA2G4BH0Y9G9 81 aa7.79□□□□□ -1.16
COL3A1-203ENST00000450867 DSCR8Q96T75 97 aa7.79□□□□□ -1.16
COL3A1-203ENST00000450867 C9JAW5 83 aa7.77□□□□□ -1.17
COL3A1-203ENST00000450867 C21orf62-AS1Q17RA5 79 aa7.77□□□□□ -1.17
COL3A1-203ENST00000450867 OBSCN-AS1Q96MR7 158 aa7.77□□□□□ -1.17
COL3A1-203ENST00000450867 LOC110117498A0A087WWA1 95 aa7.76□□□□□ -1.17
COL3A1-203ENST00000450867 COL5A1-AS1Q5SY13 56 aa7.76□□□□□ -1.17
COL3A1-203ENST00000450867 H3BT86 120 aa7.75□□□□□ -1.17
COL3A1-203ENST00000450867 A0A1B0GW54 56 aa7.74□□□□□ -1.17
COL3A1-203ENST00000450867 PDE6GP18545 87 aa7.74□□□□□ -1.17
COL3A1-203ENST00000450867 Q6ZQT0 140 aa7.74□□□□□ -1.17
COL3A1-203ENST00000450867 LINC00472Q9H8W2 130 aa7.74□□□□□ -1.17
COL3A1-203ENST00000450867 RPL37P61927 97 aaKnown RBP7.73□□□□□ -1.17
COL3A1-203ENST00000450867 KRTAP4-1Q9BYQ7 146 aa7.73□□□□□ -1.17
COL3A1-203ENST00000450867 A0A0U1RQV1 116 aa7.71□□□□□ -1.18
COL3A1-203ENST00000450867 VPS25Q9BRG1 176 aa7.71□□□□□ -1.18
COL3A1-203ENST00000450867 SPCS1Q9Y6A9 102 aa7.71□□□□□ -1.18
COL3A1-203ENST00000450867 FAT4Q6V0I7 4981 aa7.7□□□□□ -1.18
COL3A1-203ENST00000450867 PCOTHQ58A44 107 aa7.69□□□□□ -1.18
COL3A1-203ENST00000450867 C14orf132Q9NPU4 83 aa7.69□□□□□ -1.18
COL3A1-203ENST00000450867 IGKV4-1P06312 121 aa7.68□□□□□ -1.18
COL3A1-203ENST00000450867 Q75L30 129 aa7.68□□□□□ -1.18
COL3A1-203ENST00000450867 SIGMAR1Q99720 223 aa7.68□□□□□ -1.18
COL3A1-203ENST00000450867 MTURNQ8N3F0 131 aa7.66□□□□□ -1.18
COL3A1-203ENST00000450867 PCP4L1A6NKN8 68 aa7.65□□□□□ -1.18
COL3A1-203ENST00000450867 C20orf166-AS1Q96NR2 134 aa7.65□□□□□ -1.18
COL3A1-203ENST00000450867 K7EP34 96 aa7.64□□□□□ -1.19
COL3A1-203ENST00000450867 A8MUU9 505 aa7.63□□□□□ -1.19
COL3A1-203ENST00000450867 J3KT08 172 aa7.63□□□□□ -1.19
COL3A1-203ENST00000450867 SMCPP49901 116 aaPredicted RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms