RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 ANKRD17O75179 2603 aaKnown RBP2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 TENM2Q9NT68 2774 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 DSPP15924 2871 aaKnown RBP2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 H0YAA0 97 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 K7ERS5 55 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 OTOGQ6ZRI0 2925 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 C15orf56Q8N910 161 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 DEFB105AQ8NG35 78 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 DMXL2Q8TDJ6 3036 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 MRPL34Q9BQ48 92 aaKnown RBP2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 CELSR2Q9HCU4 2923 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 PIEZO2Q9H5I5 2752 aa2.04□□□□□ -2.08
HMGB3P8-201ENST00000449709 MAP1BP46821 2468 aaKnown RBP2.03□□□□□ -2.08
HMGB3P8-201ENST00000449709 PANO1I0J062 215 aa2.03□□□□□ -2.08
HMGB3P8-201ENST00000449709 LELP1Q5T871 98 aa2.03□□□□□ -2.08
HMGB3P8-201ENST00000449709 BRD3OSQ6XYD6 125 aa2.03□□□□□ -2.08
HMGB3P8-201ENST00000449709 COL6A6A6NMZ7 2263 aa2.03□□□□□ -2.08
HMGB3P8-201ENST00000449709 SMG1Q96Q15 3661 aaKnown RBP2.03□□□□□ -2.09
HMGB3P8-201ENST00000449709 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 CELSR3Q9NYQ7 3312 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 AKAP9Q99996 3911 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 NBDYA0A0U1RRE5 68 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 A0A1B0GVX0 72 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 Q6ZSA8 131 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 C4orf3Q8WVX3 66 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 MYO15AQ9UKN7 3530 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 APC2O95996 2303 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 ROS1P08922 2347 aa2.02□□□□□ -2.09
HMGB3P8-201ENST00000449709 KRTAP10-5P60370 271 aa2.01□□□□□ -2.09
HMGB3P8-201ENST00000449709 LCE1FQ5T754 118 aa2.01□□□□□ -2.09
HMGB3P8-201ENST00000449709 C10orf99Q6UWK7 81 aa2.01□□□□□ -2.09
HMGB3P8-201ENST00000449709 PTPRZ1P23471 2315 aaPredicted RBP2□□□□□ -2.09
HMGB3P8-201ENST00000449709 AKAP6Q13023 2319 aa2□□□□□ -2.09
HMGB3P8-201ENST00000449709 PSORS1C2Q9UIG4 136 aa2□□□□□ -2.09
HMGB3P8-201ENST00000449709 ACACAQ13085 2346 aa2□□□□□ -2.09
HMGB3P8-201ENST00000449709 RP1L1Q8IWN7 2480 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P8-201ENST00000449709 ASH1LQ9NR48 2969 aaKnown RBP1.99□□□□□ -2.09
HMGB3P8-201ENST00000449709 DNAH1Q9P2D7 4330 aa1.99□□□□□ -2.09
HMGB3P8-201ENST00000449709 MAP1AP78559 2803 aaPredicted RBP1.99□□□□□ -2.09
HMGB3P8-201ENST00000449709 A0A0G2JQZ4 141 aa1.99□□□□□ -2.09
HMGB3P8-201ENST00000449709 A0A1W2PNN7 141 aa1.99□□□□□ -2.09
HMGB3P8-201ENST00000449709 TPRXLQ17RH7 258 aa1.99□□□□□ -2.09
HMGB3P8-201ENST00000449709 LOC400499M0QZD8 3231 aa1.98□□□□□ -2.09
HMGB3P8-201ENST00000449709 TACC2O95359 2948 aa1.98□□□□□ -2.09
HMGB3P8-201ENST00000449709 IGF2RP11717 2491 aa1.98□□□□□ -2.09
HMGB3P8-201ENST00000449709 LY6EQ16553 131 aa1.98□□□□□ -2.09
HMGB3P8-201ENST00000449709 DEFB136Q30KP8 78 aa1.98□□□□□ -2.09
HMGB3P8-201ENST00000449709 CIRBP-AS1Q8TBR5 109 aa1.98□□□□□ -2.09
HMGB3P8-201ENST00000449709 TPRP12270 2363 aaKnown RBP1.98□□□□□ -2.09
HMGB3P8-201ENST00000449709 DCHS2Q6V1P9 2916 aa1.97□□□□□ -2.09
HMGB3P8-201ENST00000449709 TRIOBPQ9H2D6 2365 aa1.97□□□□□ -2.09
HMGB3P8-201ENST00000449709 H3BNG1 76 aa1.97□□□□□ -2.09
HMGB3P8-201ENST00000449709 K7EIL1 84 aa1.97□□□□□ -2.09
HMGB3P8-201ENST00000449709 SPINT4Q6UDR6 99 aa1.97□□□□□ -2.09
HMGB3P8-201ENST00000449709 NOTCH3Q9UM47 2321 aa1.97□□□□□ -2.09
HMGB3P8-201ENST00000449709 C2CD3Q4AC94 2353 aa1.96□□□□□ -2.09
HMGB3P8-201ENST00000449709 HRNRQ86YZ3 2850 aaPredicted RBP1.96□□□□□ -2.09
HMGB3P8-201ENST00000449709 CELSR1Q9NYQ6 3014 aa1.96□□□□□ -2.1
HMGB3P8-201ENST00000449709 ITPR1Q14643 2758 aa1.96□□□□□ -2.1
HMGB3P8-201ENST00000449709 COX6B2Q6YFQ2 88 aa1.96□□□□□ -2.1
HMGB3P8-201ENST00000449709 KRTAP13-1Q8IUC0 172 aa1.96□□□□□ -2.1
HMGB3P8-201ENST00000449709 SPTBN4Q9H254 2564 aa1.96□□□□□ -2.1
HMGB3P8-201ENST00000449709 A0A096LPF7 62 aa1.95□□□□□ -2.1
HMGB3P8-201ENST00000449709 H1FX-AS1Q4G0G2 97 aa1.95□□□□□ -2.1
HMGB3P8-201ENST00000449709 LAMA5O15230 3695 aa1.95□□□□□ -2.1
HMGB3P8-201ENST00000449709 ANKHD1Q8IWZ3 2542 aaKnown RBP1.95□□□□□ -2.1
HMGB3P8-201ENST00000449709 COL12A1Q99715 3063 aa1.95□□□□□ -2.1
HMGB3P8-201ENST00000449709 ATMQ13315 3056 aa1.94□□□□□ -2.1
HMGB3P8-201ENST00000449709 NCOR2Q9Y618 2525 aa1.94□□□□□ -2.1
HMGB3P8-201ENST00000449709 ANK3Q12955 4377 aaKnown RBP1.94□□□□□ -2.1
HMGB3P8-201ENST00000449709 KRTAP9-6A8MVA2 160 aa1.94□□□□□ -2.1
HMGB3P8-201ENST00000449709 KRTAP1-4P0C5Y4 121 aa1.94□□□□□ -2.1
HMGB3P8-201ENST00000449709 CACNA1HO95180 2353 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 A0A1B0GU33 70 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 DEFB130BP0DP73 79 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 DEFB130AP0DP74 79 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 LINC01556Q5JQF7 62 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 SSBP3-AS1Q7Z2R9 100 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 VPS13DQ5THJ4 4388 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 LRBAP50851 2863 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 NBPF19A0A087WUL8 3843 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 ASPMQ8IZT6 3477 aa1.93□□□□□ -2.1
HMGB3P8-201ENST00000449709 DMXL1Q9Y485 3027 aa1.92□□□□□ -2.1
HMGB3P8-201ENST00000449709 KRTAP10-12P60413 245 aa1.92□□□□□ -2.1
HMGB3P8-201ENST00000449709 BSNQ9UPA5 3926 aa1.92□□□□□ -2.1
HMGB3P8-201ENST00000449709 RELNP78509 3460 aa1.92□□□□□ -2.1
HMGB3P8-201ENST00000449709 ZDBF2Q9HCK1 2354 aa1.92□□□□□ -2.1
HMGB3P8-201ENST00000449709 SPTA1P02549 2419 aa1.91□□□□□ -2.1
HMGB3P8-201ENST00000449709 PRLHP81277 87 aa1.91□□□□□ -2.1
HMGB3P8-201ENST00000449709 ADGRG4Q8IZF6 3080 aa1.9□□□□□ -2.1
HMGB3P8-201ENST00000449709 NBASA2RRP1 2371 aa1.9□□□□□ -2.11
HMGB3P8-201ENST00000449709 KRTAP5-2Q701N4 177 aa1.9□□□□□ -2.11
HMGB3P8-201ENST00000449709 CRIPTQ9P021 101 aa1.89□□□□□ -2.11
HMGB3P8-201ENST00000449709 OBSCNQ5VST9 7968 aa1.89□□□□□ -2.11
HMGB3P8-201ENST00000449709 APCP25054 2843 aa1.89□□□□□ -2.11
HMGB3P8-201ENST00000449709 PRRC2CQ9Y520 2896 aaKnown RBP1.88□□□□□ -2.11
HMGB3P8-201ENST00000449709 SPTAN1Q13813 2472 aaKnown RBP1.88□□□□□ -2.11
HMGB3P8-201ENST00000449709 RPL37P61927 97 aaKnown RBP1.88□□□□□ -2.11
HMGB3P8-201ENST00000449709 DEFB124Q8NES8 71 aa1.88□□□□□ -2.11
HMGB3P8-201ENST00000449709 PRO2289Q9P1D8 64 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms