RNA–Protein interactions for RNA: ENST00000448539.1

GTF3C3-206, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-206ENST00000448539 Q6ZQY7 126 aa8.1□□□□□ -1.11
GTF3C3-206ENST00000448539 SPINK1P00995 79 aa8.09□□□□□ -1.11
GTF3C3-206ENST00000448539 LINC01547P58512 204 aaPredicted RBP8.09□□□□□ -1.11
GTF3C3-206ENST00000448539 LOC105371267A0A1B0GV96 52 aa8.08□□□□□ -1.12
GTF3C3-206ENST00000448539 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.08□□□□□ -1.12
GTF3C3-206ENST00000448539 K7ERJ3 54 aa8.07□□□□□ -1.12
GTF3C3-206ENST00000448539 PSMB2P49721 201 aa8.07□□□□□ -1.12
GTF3C3-206ENST00000448539 Q8N377 158 aa8.07□□□□□ -1.12
GTF3C3-206ENST00000448539 RNF213Q63HN8 5207 aa8.06□□□□□ -1.12
GTF3C3-206ENST00000448539 F8WEM9 126 aa8.06□□□□□ -1.12
GTF3C3-206ENST00000448539 SMIM29Q86T20 159 aa8.06□□□□□ -1.12
GTF3C3-206ENST00000448539 TSTD3H0UI37 97 aa8.05□□□□□ -1.12
GTF3C3-206ENST00000448539 RETNLBQ9BQ08 111 aa8.05□□□□□ -1.12
GTF3C3-206ENST00000448539 M0R143 59 aa8.04□□□□□ -1.12
GTF3C3-206ENST00000448539 TRIAP1O43715 76 aa8.04□□□□□ -1.12
GTF3C3-206ENST00000448539 COX6CP09669 75 aa8.04□□□□□ -1.12
GTF3C3-206ENST00000448539 RPS29P62273 56 aaKnown RBP8.04□□□□□ -1.12
GTF3C3-206ENST00000448539 OCIAD2Q56VL3 154 aa8.03□□□□□ -1.12
GTF3C3-206ENST00000448539 PPDPFLQ8WWR9 84 aa8.03□□□□□ -1.12
GTF3C3-206ENST00000448539 A0A1B0GX51 115 aa8.02□□□□□ -1.13
GTF3C3-206ENST00000448539 HRCT1Q6UXD1 115 aa8.02□□□□□ -1.13
GTF3C3-206ENST00000448539 FAM218AQ96MZ4 157 aa8.02□□□□□ -1.13
GTF3C3-206ENST00000448539 SNHG12Q9BXW3 62 aa8.02□□□□□ -1.13
GTF3C3-206ENST00000448539 LPAP08519 4548 aa8.02□□□□□ -1.13
GTF3C3-206ENST00000448539 DNAL4O96015 105 aa7.99□□□□□ -1.13
GTF3C3-206ENST00000448539 CD164Q04900 197 aa7.99□□□□□ -1.13
GTF3C3-206ENST00000448539 CLEC2BQ92478 149 aa7.99□□□□□ -1.13
GTF3C3-206ENST00000448539 LIMD2Q9BT23 127 aa7.99□□□□□ -1.13
GTF3C3-206ENST00000448539 IGLV7-46A0A075B6I9 117 aa7.98□□□□□ -1.13
GTF3C3-206ENST00000448539 SCGB1C2P0DMR2 95 aa7.98□□□□□ -1.13
GTF3C3-206ENST00000448539 FP248Q71RG6 208 aaPredicted RBP7.98□□□□□ -1.13
GTF3C3-206ENST00000448539 Q6JHZ5 121 aa7.97□□□□□ -1.13
GTF3C3-206ENST00000448539 FABP2P12104 132 aa7.95□□□□□ -1.14
GTF3C3-206ENST00000448539 IGLV8-61A0A075B6I0 122 aa7.94□□□□□ -1.14
GTF3C3-206ENST00000448539 A0A0G2JQZ4 141 aa7.94□□□□□ -1.14
GTF3C3-206ENST00000448539 H3BQ85 93 aa7.94□□□□□ -1.14
GTF3C3-206ENST00000448539 BATFQ16520 125 aa7.93□□□□□ -1.14
GTF3C3-206ENST00000448539 ORMDL1Q9P0S3 153 aa7.93□□□□□ -1.14
GTF3C3-206ENST00000448539 NDUFV3P56181 108 aaKnown RBP7.92□□□□□ -1.14
GTF3C3-206ENST00000448539 H3BUT2 72 aa7.91□□□□□ -1.14
GTF3C3-206ENST00000448539 TPRXLQ17RH7 258 aa7.91□□□□□ -1.14
GTF3C3-206ENST00000448539 IGFL1Q6UW32 110 aa7.91□□□□□ -1.14
GTF3C3-206ENST00000448539 TRACP01848 142 aa7.9□□□□□ -1.14
GTF3C3-206ENST00000448539 CDIP1Q9H305 208 aa7.9□□□□□ -1.14
GTF3C3-206ENST00000448539 TMEM256-PLSCR3K7ERE1 68 aa7.89□□□□□ -1.15
GTF3C3-206ENST00000448539 TCL1BO95988 128 aa7.89□□□□□ -1.15
GTF3C3-206ENST00000448539 Q5XG85 94 aa7.89□□□□□ -1.15
GTF3C3-206ENST00000448539 H3BMG7 143 aa7.88□□□□□ -1.15
GTF3C3-206ENST00000448539 LST1O00453 97 aa7.88□□□□□ -1.15
GTF3C3-206ENST00000448539 NAA38Q9BRA0 125 aaKnown RBP7.87□□□□□ -1.15
GTF3C3-206ENST00000448539 TRBV7-7A0A0K0K1E9 115 aa7.86□□□□□ -1.15
GTF3C3-206ENST00000448539 LYRM7Q5U5X0 104 aa7.86□□□□□ -1.15
GTF3C3-206ENST00000448539 ATXN8Q156A1 80 aa7.85□□□□□ -1.15
GTF3C3-206ENST00000448539 A0A1B0GV72 72 aa7.83□□□□□ -1.16
GTF3C3-206ENST00000448539 UBE2V1Q13404 147 aa7.83□□□□□ -1.16
GTF3C3-206ENST00000448539 KRTAP13-3Q3SY46 172 aa7.83□□□□□ -1.16
GTF3C3-206ENST00000448539 C1orf195Q5TG92 126 aa7.82□□□□□ -1.16
GTF3C3-206ENST00000448539 TEN1Q86WV5 123 aa7.82□□□□□ -1.16
GTF3C3-206ENST00000448539 ANKRD29Q8N6D5 301 aa7.82□□□□□ -1.16
GTF3C3-206ENST00000448539 BAALC-AS2P0C853 105 aa7.8□□□□□ -1.16
GTF3C3-206ENST00000448539 Q6Q795 121 aa7.8□□□□□ -1.16
GTF3C3-206ENST00000448539 TRBV20-1A0A075B6N2 111 aa7.79□□□□□ -1.16
GTF3C3-206ENST00000448539 C9orf118A6NHY6 69 aa7.79□□□□□ -1.16
GTF3C3-206ENST00000448539 ASB16-AS1Q495Z4 193 aa7.79□□□□□ -1.16
GTF3C3-206ENST00000448539 SS18L2Q9UHA2 77 aa7.79□□□□□ -1.16
GTF3C3-206ENST00000448539 TAX1BP3O14907 124 aa7.77□□□□□ -1.17
GTF3C3-206ENST00000448539 MUC2Q02817 5179 aa7.77□□□□□ -1.17
GTF3C3-206ENST00000448539 A0A087WSZ3 146 aa7.76□□□□□ -1.17
GTF3C3-206ENST00000448539 RBM3P98179 157 aaKnown RBP7.76□□□□□ -1.17
GTF3C3-206ENST00000448539 DSCR8Q96T75 97 aa7.75□□□□□ -1.17
GTF3C3-206ENST00000448539 A0A1W2PNM2 257 aa7.74□□□□□ -1.17
GTF3C3-206ENST00000448539 A0A1W2PPM0 123 aa7.74□□□□□ -1.17
GTF3C3-206ENST00000448539 C9orf92A6NGG3 77 aa7.74□□□□□ -1.17
GTF3C3-206ENST00000448539 CCKP06307 115 aa7.74□□□□□ -1.17
GTF3C3-206ENST00000448539 TRBV7-4A0A0J9YYF1 115 aa7.73□□□□□ -1.17
GTF3C3-206ENST00000448539 C9JAW5 83 aa7.73□□□□□ -1.17
GTF3C3-206ENST00000448539 COL5A1-AS1Q5SY13 56 aa7.72□□□□□ -1.17
GTF3C3-206ENST00000448539 VPS25Q9BRG1 176 aa7.72□□□□□ -1.17
GTF3C3-206ENST00000448539 JMJD7-PLA2G4BH0Y9G9 81 aa7.71□□□□□ -1.18
GTF3C3-206ENST00000448539 XP32Q5T750 250 aa7.71□□□□□ -1.18
GTF3C3-206ENST00000448539 PCP4L1A6NKN8 68 aa7.7□□□□□ -1.18
GTF3C3-206ENST00000448539 SEC61BP60468 96 aaKnown RBP7.7□□□□□ -1.18
GTF3C3-206ENST00000448539 SPCS1Q9Y6A9 102 aa7.66□□□□□ -1.18
GTF3C3-206ENST00000448539 H3BT86 120 aa7.65□□□□□ -1.18
GTF3C3-206ENST00000448539 C21orf62-AS1Q17RA5 79 aa7.65□□□□□ -1.18
GTF3C3-206ENST00000448539 PDE6GP18545 87 aa7.64□□□□□ -1.19
GTF3C3-206ENST00000448539 MUC17Q685J3 4493 aa7.63□□□□□ -1.19
GTF3C3-206ENST00000448539 LOC110117498A0A087WWA1 95 aa7.63□□□□□ -1.19
GTF3C3-206ENST00000448539 MTURNQ8N3F0 131 aa7.63□□□□□ -1.19
GTF3C3-206ENST00000448539 Q96NJ1 140 aa7.63□□□□□ -1.19
GTF3C3-206ENST00000448539 SIGMAR1Q99720 223 aa7.63□□□□□ -1.19
GTF3C3-206ENST00000448539 C14orf132Q9NPU4 83 aa7.63□□□□□ -1.19
GTF3C3-206ENST00000448539 IGKV4-1P06312 121 aa7.62□□□□□ -1.19
GTF3C3-206ENST00000448539 Q6ZQT0 140 aa7.62□□□□□ -1.19
GTF3C3-206ENST00000448539 OBSCN-AS1Q96MR7 158 aa7.61□□□□□ -1.19
GTF3C3-206ENST00000448539 A0A0U1RQV1 116 aa7.6□□□□□ -1.19
GTF3C3-206ENST00000448539 A0A1B0GW54 56 aa7.59□□□□□ -1.19
GTF3C3-206ENST00000448539 DEFB116Q30KQ4 102 aa7.58□□□□□ -1.2
GTF3C3-206ENST00000448539 LINC00472Q9H8W2 130 aa7.58□□□□□ -1.2
GTF3C3-206ENST00000448539 FAT4Q6V0I7 4981 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms