RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 PIEZO1Q92508 2521 aa5.93□□□□□ -1.46
SYNPO2-204ENST00000448416 A8MWP4 228 aa5.93□□□□□ -1.46
SYNPO2-204ENST00000448416 REG3GQ6UW15 175 aa5.93□□□□□ -1.46
SYNPO2-204ENST00000448416 PLAC8Q9NZF1 115 aa5.92□□□□□ -1.46
SYNPO2-204ENST00000448416 H0Y9J4 135 aa5.91□□□□□ -1.46
SYNPO2-204ENST00000448416 ITPR3Q14573 2671 aa5.91□□□□□ -1.46
SYNPO2-204ENST00000448416 KRTAP7-1Q8IUC3 87 aa5.91□□□□□ -1.46
SYNPO2-204ENST00000448416 ZNF469Q96JG9 3925 aaPredicted RBP5.91□□□□□ -1.46
SYNPO2-204ENST00000448416 LINC00313P59037 77 aa5.91□□□□□ -1.46
SYNPO2-204ENST00000448416 PRAC1Q96KF2 57 aa5.9□□□□□ -1.47
SYNPO2-204ENST00000448416 IGLV8-61A0A075B6I0 122 aa5.89□□□□□ -1.47
SYNPO2-204ENST00000448416 PRLHP81277 87 aa5.89□□□□□ -1.47
SYNPO2-204ENST00000448416 FLNAP21333 2647 aaKnown RBP5.89□□□□□ -1.47
SYNPO2-204ENST00000448416 ACANP16112 2415 aa5.88□□□□□ -1.47
SYNPO2-204ENST00000448416 LINC00472Q9H8W2 130 aa5.88□□□□□ -1.47
SYNPO2-204ENST00000448416 KRTAP10-3P60369 221 aa5.88□□□□□ -1.47
SYNPO2-204ENST00000448416 LINC01556Q5JQF7 62 aa5.88□□□□□ -1.47
SYNPO2-204ENST00000448416 KRTAP1-3Q8IUG1 177 aa5.88□□□□□ -1.47
SYNPO2-204ENST00000448416 MMP24-AS1A0A0U1RRL7 71 aa5.87□□□□□ -1.47
SYNPO2-204ENST00000448416 H3BNG1 76 aa5.87□□□□□ -1.47
SYNPO2-204ENST00000448416 HRES1P13985 223 aa5.87□□□□□ -1.47
SYNPO2-204ENST00000448416 OTOGQ6ZRI0 2925 aa5.87□□□□□ -1.47
SYNPO2-204ENST00000448416 VWFP04275 2813 aa5.84□□□□□ -1.47
SYNPO2-204ENST00000448416 H3BS24 57 aa5.84□□□□□ -1.47
SYNPO2-204ENST00000448416 TP53AIP1Q9HCN2 124 aa5.84□□□□□ -1.47
SYNPO2-204ENST00000448416 A0A096LNI7 61 aa5.84□□□□□ -1.48
SYNPO2-204ENST00000448416 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
SYNPO2-204ENST00000448416 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
SYNPO2-204ENST00000448416 HIVEP1P15822 2718 aa5.83□□□□□ -1.48
SYNPO2-204ENST00000448416 CASC10Q5T4H9 136 aa5.83□□□□□ -1.48
SYNPO2-204ENST00000448416 IGSF10Q6WRI0 2623 aa5.83□□□□□ -1.48
SYNPO2-204ENST00000448416 IGKV2-24A0A0C4DH68 120 aa5.83□□□□□ -1.48
SYNPO2-204ENST00000448416 PKD1L1Q8TDX9 2849 aa5.82□□□□□ -1.48
SYNPO2-204ENST00000448416 PRR26Q8N8Z3 221 aa5.82□□□□□ -1.48
SYNPO2-204ENST00000448416 PLA2G1BP04054 148 aaKnown RBP5.8□□□□□ -1.48
SYNPO2-204ENST00000448416 Q6ZR54 194 aa5.8□□□□□ -1.48
SYNPO2-204ENST00000448416 BAHCC1Q9P281 2608 aa5.8□□□□□ -1.48
SYNPO2-204ENST00000448416 ZNF462Q96JM2 2506 aa5.8□□□□□ -1.48
SYNPO2-204ENST00000448416 ANK3Q12955 4377 aaKnown RBP5.79□□□□□ -1.48
SYNPO2-204ENST00000448416 MDFIQ99750 246 aa5.79□□□□□ -1.48
SYNPO2-204ENST00000448416 DNAH10OSP0CZ25 163 aa5.79□□□□□ -1.48
SYNPO2-204ENST00000448416 DEFB131BA0A096LNP1 70 aa5.78□□□□□ -1.48
SYNPO2-204ENST00000448416 KRTAP1-1Q07627 177 aa5.77□□□□□ -1.49
SYNPO2-204ENST00000448416 C8orf17Q9NRJ1 99 aa5.77□□□□□ -1.49
SYNPO2-204ENST00000448416 SPRR1BP22528 89 aa5.76□□□□□ -1.49
SYNPO2-204ENST00000448416 ASB16-AS1Q495Z4 193 aa5.76□□□□□ -1.49
SYNPO2-204ENST00000448416 SRRM2Q9UQ35 2752 aaKnown RBP5.75□□□□□ -1.49
SYNPO2-204ENST00000448416 IGHV6-1A0A0B4J1U7 121 aa5.75□□□□□ -1.49
SYNPO2-204ENST00000448416 TENM2Q9NT68 2774 aa5.74□□□□□ -1.49
SYNPO2-204ENST00000448416 UBR5O95071 2799 aaPredicted RBP5.73□□□□□ -1.49
SYNPO2-204ENST00000448416 NOTCH2Q04721 2471 aa5.72□□□□□ -1.49
SYNPO2-204ENST00000448416 CDK2AP2O75956 126 aa5.72□□□□□ -1.49
SYNPO2-204ENST00000448416 MRPL34Q9BQ48 92 aaKnown RBP5.72□□□□□ -1.49
SYNPO2-204ENST00000448416 ACYP2P14621 99 aa5.72□□□□□ -1.49
SYNPO2-204ENST00000448416 Q96NJ1 140 aa5.72□□□□□ -1.49
SYNPO2-204ENST00000448416 RTL8CO15255 209 aa5.71□□□□□ -1.49
SYNPO2-204ENST00000448416 TEP1Q99973 2627 aaKnown RBP5.71□□□□□ -1.5
SYNPO2-204ENST00000448416 A0A1B0GU69 56 aa5.71□□□□□ -1.5
SYNPO2-204ENST00000448416 A0A1B0GVX0 72 aa5.71□□□□□ -1.5
SYNPO2-204ENST00000448416 KRTAP11-1Q8IUC1 163 aa5.7□□□□□ -1.5
SYNPO2-204ENST00000448416 IGLV9-49A0A0B4J1Y8 123 aa5.69□□□□□ -1.5
SYNPO2-204ENST00000448416 K7EIL1 84 aa5.69□□□□□ -1.5
SYNPO2-204ENST00000448416 SPATA8Q6RVD6 105 aa5.69□□□□□ -1.5
SYNPO2-204ENST00000448416 RETNLBQ9BQ08 111 aa5.68□□□□□ -1.5
SYNPO2-204ENST00000448416 MIR22HGQ0VDD5 57 aa5.67□□□□□ -1.5
SYNPO2-204ENST00000448416 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
SYNPO2-204ENST00000448416 SMR3AQ99954 134 aa5.67□□□□□ -1.5
SYNPO2-204ENST00000448416 A0A087X002 238 aa5.67□□□□□ -1.5
SYNPO2-204ENST00000448416 CHTF8P0CG12 524 aa5.66□□□□□ -1.5
SYNPO2-204ENST00000448416 PDZD2O15018 2839 aa5.66□□□□□ -1.5
SYNPO2-204ENST00000448416 TENM1Q9UKZ4 2725 aa5.66□□□□□ -1.5
SYNPO2-204ENST00000448416 TENM3Q9P273 2699 aa5.66□□□□□ -1.5
SYNPO2-204ENST00000448416 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
SYNPO2-204ENST00000448416 TRRAPQ9Y4A5 3859 aa5.66□□□□□ -1.5
SYNPO2-204ENST00000448416 ATRQ13535 2644 aa5.65□□□□□ -1.5
SYNPO2-204ENST00000448416 UQCR11O14957 56 aa5.65□□□□□ -1.5
SYNPO2-204ENST00000448416 Q5W150 140 aa5.65□□□□□ -1.51
SYNPO2-204ENST00000448416 HELZ2Q9BYK8 2649 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-204ENST00000448416 FBN1P35555 2871 aaKnown RBP5.63□□□□□ -1.51
SYNPO2-204ENST00000448416 USP24Q9UPU5 2620 aa5.62□□□□□ -1.51
SYNPO2-204ENST00000448416 DMAC1Q96GE9 116 aa5.61□□□□□ -1.51
SYNPO2-204ENST00000448416 CSMD3Q7Z407 3707 aa5.61□□□□□ -1.51
SYNPO2-204ENST00000448416 SPINK6Q6UWN8 80 aa5.59□□□□□ -1.51
SYNPO2-204ENST00000448416 KRTAP10-11P60412 298 aa5.59□□□□□ -1.51
SYNPO2-204ENST00000448416 KRTAP13-3Q3SY46 172 aa5.59□□□□□ -1.52
SYNPO2-204ENST00000448416 ITPR2Q14571 2701 aa5.58□□□□□ -1.52
SYNPO2-204ENST00000448416 ALMS1Q8TCU4 4167 aa5.58□□□□□ -1.52
SYNPO2-204ENST00000448416 FLNBO75369 2602 aaKnown RBP5.57□□□□□ -1.52
SYNPO2-204ENST00000448416 KRTAP13-1Q8IUC0 172 aa5.57□□□□□ -1.52
SYNPO2-204ENST00000448416 C1orf134Q5TEV5 83 aa5.54□□□□□ -1.52
SYNPO2-204ENST00000448416 KRTAP1-5Q9BYS1 174 aa5.54□□□□□ -1.52
SYNPO2-204ENST00000448416 COL7A1Q02388 2944 aa5.54□□□□□ -1.52
SYNPO2-204ENST00000448416 ZNF861PO60384 105 aa5.54□□□□□ -1.52
SYNPO2-204ENST00000448416 INAFM1C9JVW0 142 aa5.54□□□□□ -1.52
SYNPO2-204ENST00000448416 C14orf177Q52M58 125 aa5.54□□□□□ -1.52
SYNPO2-204ENST00000448416 DNAH1Q9P2D7 4330 aa5.53□□□□□ -1.52
SYNPO2-204ENST00000448416 WWC2-AS2Q96NR7 200 aa5.52□□□□□ -1.53
SYNPO2-204ENST00000448416 ANAPC11Q9NYG5 84 aa5.52□□□□□ -1.53
SYNPO2-204ENST00000448416 LINC00483Q53H64 154 aa5.52□□□□□ -1.53
SYNPO2-204ENST00000448416 ZNF706Q9Y5V0 76 aaPredicted RBP5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms