RNA–Protein interactions for RNA: ENST00000444664.5

SHC1-209, Transcript of SHC adaptor protein 1, humanhuman

TSL 5

Gene SHC1, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-209ENST00000444664 SMIM11BQ8TCY0 68 aa9.68□□□□□ -0.86
SHC1-209ENST00000444664 H3BMG7 143 aa9.67□□□□□ -0.86
SHC1-209ENST00000444664 SVIPQ8NHG7 77 aa9.67□□□□□ -0.86
SHC1-209ENST00000444664 TRBV20-1A0A075B6N2 111 aa9.66□□□□□ -0.86
SHC1-209ENST00000444664 RETNLBQ9BQ08 111 aa9.65□□□□□ -0.86
SHC1-209ENST00000444664 SPRR1BP22528 89 aa9.63□□□□□ -0.87
SHC1-209ENST00000444664 SPAG11AQ6PDA7 123 aa9.63□□□□□ -0.87
SHC1-209ENST00000444664 C9orf153Q5TBE3 101 aa9.62□□□□□ -0.87
SHC1-209ENST00000444664 C4orf48Q5BLP8 95 aa9.61□□□□□ -0.87
SHC1-209ENST00000444664 SSBP3-AS1Q7Z2R9 100 aa9.61□□□□□ -0.87
SHC1-209ENST00000444664 DEFB105AQ8NG35 78 aa9.61□□□□□ -0.87
SHC1-209ENST00000444664 PPDPFLQ8WWR9 84 aa9.6□□□□□ -0.87
SHC1-209ENST00000444664 NAA38Q9BRA0 125 aaKnown RBP9.6□□□□□ -0.87
SHC1-209ENST00000444664 PRO0461Q9UI25 63 aa9.6□□□□□ -0.87
SHC1-209ENST00000444664 RNF213Q63HN8 5207 aa9.59□□□□□ -0.87
SHC1-209ENST00000444664 ETDBQ3ZM63 59 aa9.58□□□□□ -0.88
SHC1-209ENST00000444664 K7ERJ3 54 aa9.57□□□□□ -0.88
SHC1-209ENST00000444664 CFC1BP0CG36 223 aa9.57□□□□□ -0.88
SHC1-209ENST00000444664 CFC1P0CG37 223 aa9.57□□□□□ -0.88
SHC1-209ENST00000444664 LINC01547P58512 204 aaPredicted RBP9.57□□□□□ -0.88
SHC1-209ENST00000444664 TEN1Q86WV5 123 aa9.56□□□□□ -0.88
SHC1-209ENST00000444664 LAMTOR3Q9UHA4 124 aa9.56□□□□□ -0.88
SHC1-209ENST00000444664 TEX49A0A1B0GTD5 131 aa9.56□□□□□ -0.88
SHC1-209ENST00000444664 SPINK1P00995 79 aa9.56□□□□□ -0.88
SHC1-209ENST00000444664 Q1RN00 199 aa9.56□□□□□ -0.88
SHC1-209ENST00000444664 IGLV5-48A0A075B6I7 105 aa9.55□□□□□ -0.88
SHC1-209ENST00000444664 H7C2G1 150 aa9.55□□□□□ -0.88
SHC1-209ENST00000444664 LINC00575Q6W349 94 aa9.55□□□□□ -0.88
SHC1-209ENST00000444664 SLC25A20O43772 301 aa9.54□□□□□ -0.88
SHC1-209ENST00000444664 A0A0B4J2C4 111 aa9.53□□□□□ -0.88
SHC1-209ENST00000444664 SMIM29Q86T20 159 aa9.53□□□□□ -0.88
SHC1-209ENST00000444664 IGLV7-46A0A075B6I9 117 aa9.51□□□□□ -0.89
SHC1-209ENST00000444664 Q8N377 158 aa9.51□□□□□ -0.89
SHC1-209ENST00000444664 hADV29S1A0JD25 119 aa9.5□□□□□ -0.89
SHC1-209ENST00000444664 RPS29P62273 56 aaKnown RBP9.5□□□□□ -0.89
SHC1-209ENST00000444664 Q6ZQY7 126 aa9.5□□□□□ -0.89
SHC1-209ENST00000444664 SCGB1C2P0DMR2 95 aa9.49□□□□□ -0.89
SHC1-209ENST00000444664 Q6Q795 121 aa9.49□□□□□ -0.89
SHC1-209ENST00000444664 HRCT1Q6UXD1 115 aa9.49□□□□□ -0.89
SHC1-209ENST00000444664 PSMB2P49721 201 aa9.48□□□□□ -0.89
SHC1-209ENST00000444664 PRO1854Q9UHT4 67 aa9.48□□□□□ -0.89
SHC1-209ENST00000444664 CDIP1Q9H305 208 aa9.47□□□□□ -0.89
SHC1-209ENST00000444664 FP248Q71RG6 208 aaPredicted RBP9.46□□□□□ -0.9
SHC1-209ENST00000444664 A0A0G2JQZ4 141 aa9.45□□□□□ -0.9
SHC1-209ENST00000444664 TPRXLQ17RH7 258 aa9.45□□□□□ -0.9
SHC1-209ENST00000444664 ATXN8Q156A1 80 aa9.44□□□□□ -0.9
SHC1-209ENST00000444664 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.43□□□□□ -0.9
SHC1-209ENST00000444664 ANAPC13Q9BS18 74 aa9.43□□□□□ -0.9
SHC1-209ENST00000444664 SMCPP49901 116 aaPredicted RBP9.42□□□□□ -0.9
SHC1-209ENST00000444664 FAM218AQ96MZ4 157 aa9.42□□□□□ -0.9
SHC1-209ENST00000444664 SNCGO76070 127 aa9.41□□□□□ -0.9
SHC1-209ENST00000444664 COX6CP09669 75 aa9.41□□□□□ -0.9
SHC1-209ENST00000444664 H0YGX0 51 aa9.4□□□□□ -0.9
SHC1-209ENST00000444664 FAM240AA0A1B0GVK7 77 aa9.39□□□□□ -0.91
SHC1-209ENST00000444664 F8WEM9 126 aa9.39□□□□□ -0.91
SHC1-209ENST00000444664 H3BT86 120 aa9.39□□□□□ -0.91
SHC1-209ENST00000444664 TCL1BO95988 128 aa9.39□□□□□ -0.91
SHC1-209ENST00000444664 CD164Q04900 197 aa9.39□□□□□ -0.91
SHC1-209ENST00000444664 LIMD2Q9BT23 127 aa9.39□□□□□ -0.91
SHC1-209ENST00000444664 TRIAP1O43715 76 aa9.38□□□□□ -0.91
SHC1-209ENST00000444664 KRTAP13-3Q3SY46 172 aa9.38□□□□□ -0.91
SHC1-209ENST00000444664 ANKRD29Q8N6D5 301 aa9.38□□□□□ -0.91
SHC1-209ENST00000444664 MT-ATP8P03928 68 aa9.36□□□□□ -0.91
SHC1-209ENST00000444664 MUC17Q685J3 4493 aa9.35□□□□□ -0.91
SHC1-209ENST00000444664 ACYP1P07311 99 aa9.35□□□□□ -0.91
SHC1-209ENST00000444664 C9JAW5 83 aa9.34□□□□□ -0.91
SHC1-209ENST00000444664 IGLV8-61A0A075B6I0 122 aa9.33□□□□□ -0.92
SHC1-209ENST00000444664 CLEC2BQ92478 149 aa9.33□□□□□ -0.92
SHC1-209ENST00000444664 IGFL1Q6UW32 110 aa9.32□□□□□ -0.92
SHC1-209ENST00000444664 IMUPQ9GZP8 106 aa9.32□□□□□ -0.92
SHC1-209ENST00000444664 MUC2Q02817 5179 aa9.31□□□□□ -0.92
SHC1-209ENST00000444664 A0A1B0GX51 115 aa9.31□□□□□ -0.92
SHC1-209ENST00000444664 NDUFV3P56181 108 aaKnown RBP9.31□□□□□ -0.92
SHC1-209ENST00000444664 Q6JHZ5 121 aa9.31□□□□□ -0.92
SHC1-209ENST00000444664 Q5XG85 94 aa9.31□□□□□ -0.92
SHC1-209ENST00000444664 C1orf195Q5TG92 126 aa9.27□□□□□ -0.93
SHC1-209ENST00000444664 TRBV7-7A0A0K0K1E9 115 aa9.25□□□□□ -0.93
SHC1-209ENST00000444664 DNAL4O96015 105 aa9.24□□□□□ -0.93
SHC1-209ENST00000444664 LST1O00453 97 aa9.23□□□□□ -0.93
SHC1-209ENST00000444664 GHRHP01286 108 aa9.22□□□□□ -0.93
SHC1-209ENST00000444664 ORMDL1Q9P0S3 153 aa9.22□□□□□ -0.93
SHC1-209ENST00000444664 C9orf92A6NGG3 77 aa9.21□□□□□ -0.94
SHC1-209ENST00000444664 XP32Q5T750 250 aa9.21□□□□□ -0.94
SHC1-209ENST00000444664 TRACP01848 142 aa9.18□□□□□ -0.94
SHC1-209ENST00000444664 ASB16-AS1Q495Z4 193 aa9.17□□□□□ -0.94
SHC1-209ENST00000444664 LINC00643Q86TS7 51 aa9.17□□□□□ -0.94
SHC1-209ENST00000444664 SS18L2Q9UHA2 77 aa9.16□□□□□ -0.94
SHC1-209ENST00000444664 H3BQ85 93 aa9.14□□□□□ -0.95
SHC1-209ENST00000444664 SEC61BP60468 96 aaKnown RBP9.14□□□□□ -0.95
SHC1-209ENST00000444664 TMEM256-PLSCR3K7ERE1 68 aa9.13□□□□□ -0.95
SHC1-209ENST00000444664 A0A1W2PNM2 257 aa9.12□□□□□ -0.95
SHC1-209ENST00000444664 UQCRQO14949 82 aa9.11□□□□□ -0.95
SHC1-209ENST00000444664 A0A087WSZ3 146 aa9.1□□□□□ -0.95
SHC1-209ENST00000444664 KRTAP4-1Q9BYQ7 146 aa9.1□□□□□ -0.95
SHC1-209ENST00000444664 FAT4Q6V0I7 4981 aa9.1□□□□□ -0.95
SHC1-209ENST00000444664 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
SHC1-209ENST00000444664 ATOX1O00244 68 aa9.06□□□□□ -0.96
SHC1-209ENST00000444664 A0A0U1RQV1 116 aa9.05□□□□□ -0.96
SHC1-209ENST00000444664 BAALC-AS2P0C853 105 aa9.05□□□□□ -0.96
SHC1-209ENST00000444664 TRBV7-4A0A0J9YYF1 115 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms