RNA–Protein interactions for RNA: ENST00000443574.1

HLA-DQB1-206, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 309 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-206ENST00000443574 Q1RN00 199 aa5.96□□□□□ -1.46
HLA-DQB1-206ENST00000443574 CEND1Q8N111 149 aa5.96□□□□□ -1.46
HLA-DQB1-206ENST00000443574 RETNLBQ9BQ08 111 aa5.96□□□□□ -1.46
HLA-DQB1-206ENST00000443574 IGLV5-48A0A075B6I7 105 aa5.95□□□□□ -1.46
HLA-DQB1-206ENST00000443574 F8WEM9 126 aa5.95□□□□□ -1.46
HLA-DQB1-206ENST00000443574 H7C2G1 150 aa5.95□□□□□ -1.46
HLA-DQB1-206ENST00000443574 KRTAP9-9Q9BYP9 154 aa5.95□□□□□ -1.46
HLA-DQB1-206ENST00000443574 KRTAP9-4Q9BYQ2 154 aa5.95□□□□□ -1.46
HLA-DQB1-206ENST00000443574 hADV29S1A0JD25 119 aa5.94□□□□□ -1.46
HLA-DQB1-206ENST00000443574 CFC1BP0CG36 223 aa5.94□□□□□ -1.46
HLA-DQB1-206ENST00000443574 CFC1P0CG37 223 aa5.94□□□□□ -1.46
HLA-DQB1-206ENST00000443574 HSD52Q0P140 79 aa5.94□□□□□ -1.46
HLA-DQB1-206ENST00000443574 LINC00575Q6W349 94 aa5.94□□□□□ -1.46
HLA-DQB1-206ENST00000443574 FP248Q71RG6 208 aaPredicted RBP5.94□□□□□ -1.46
HLA-DQB1-206ENST00000443574 LIMD2Q9BT23 127 aa5.94□□□□□ -1.46
HLA-DQB1-206ENST00000443574 UQCR10Q9UDW1 63 aa5.94□□□□□ -1.46
HLA-DQB1-206ENST00000443574 PRO1933Q9H354 126 aa5.93□□□□□ -1.46
HLA-DQB1-206ENST00000443574 IGLV7-46A0A075B6I9 117 aa5.92□□□□□ -1.46
HLA-DQB1-206ENST00000443574 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.92□□□□□ -1.46
HLA-DQB1-206ENST00000443574 Q6ZQY7 126 aa5.92□□□□□ -1.46
HLA-DQB1-206ENST00000443574 PRO1854Q9UHT4 67 aa5.92□□□□□ -1.46
HLA-DQB1-206ENST00000443574 LPAP08519 4548 aa5.92□□□□□ -1.46
HLA-DQB1-206ENST00000443574 KRTAP4-8A0A0G2JLE6 195 aa5.91□□□□□ -1.46
HLA-DQB1-206ENST00000443574 H0YGX0 51 aa5.91□□□□□ -1.46
HLA-DQB1-206ENST00000443574 TPRXLQ17RH7 258 aa5.91□□□□□ -1.46
HLA-DQB1-206ENST00000443574 PPDPFLQ8WWR9 84 aa5.91□□□□□ -1.46
HLA-DQB1-206ENST00000443574 FXYD2P54710 66 aa5.9□□□□□ -1.46
HLA-DQB1-206ENST00000443574 LINC01547P58512 204 aaPredicted RBP5.9□□□□□ -1.46
HLA-DQB1-206ENST00000443574 CD164Q04900 197 aa5.9□□□□□ -1.46
HLA-DQB1-206ENST00000443574 OCIAD2Q56VL3 154 aa5.9□□□□□ -1.46
HLA-DQB1-206ENST00000443574 SMIM6P0DI80 62 aa5.89□□□□□ -1.47
HLA-DQB1-206ENST00000443574 Q8N377 158 aa5.89□□□□□ -1.47
HLA-DQB1-206ENST00000443574 SMIM29Q86T20 159 aa5.88□□□□□ -1.47
HLA-DQB1-206ENST00000443574 A0A1B0GX51 115 aa5.87□□□□□ -1.47
HLA-DQB1-206ENST00000443574 COX6CP09669 75 aa5.87□□□□□ -1.47
HLA-DQB1-206ENST00000443574 Q6JHZ5 121 aa5.87□□□□□ -1.47
HLA-DQB1-206ENST00000443574 HRCT1Q6UXD1 115 aa5.87□□□□□ -1.47
HLA-DQB1-206ENST00000443574 PSMB2P49721 201 aa5.86□□□□□ -1.47
HLA-DQB1-206ENST00000443574 SNHG12Q9BXW3 62 aa5.86□□□□□ -1.47
HLA-DQB1-206ENST00000443574 DNAL4O96015 105 aa5.85□□□□□ -1.47
HLA-DQB1-206ENST00000443574 CLEC2BQ92478 149 aa5.85□□□□□ -1.47
HLA-DQB1-206ENST00000443574 M0R143 59 aa5.84□□□□□ -1.47
HLA-DQB1-206ENST00000443574 TRIAP1O43715 76 aa5.84□□□□□ -1.47
HLA-DQB1-206ENST00000443574 K7ERJ3 54 aa5.83□□□□□ -1.48
HLA-DQB1-206ENST00000443574 TCL1BO95988 128 aa5.83□□□□□ -1.48
HLA-DQB1-206ENST00000443574 IGLV8-61A0A075B6I0 122 aa5.82□□□□□ -1.48
HLA-DQB1-206ENST00000443574 TSTD3H0UI37 97 aa5.82□□□□□ -1.48
HLA-DQB1-206ENST00000443574 Q5XG85 94 aa5.82□□□□□ -1.48
HLA-DQB1-206ENST00000443574 FAM218AQ96MZ4 157 aa5.82□□□□□ -1.48
HLA-DQB1-206ENST00000443574 H3BQ85 93 aa5.81□□□□□ -1.48
HLA-DQB1-206ENST00000443574 KRTAP13-3Q3SY46 172 aa5.81□□□□□ -1.48
HLA-DQB1-206ENST00000443574 LCE4AQ5TA78 99 aa5.81□□□□□ -1.48
HLA-DQB1-206ENST00000443574 ORMDL1Q9P0S3 153 aa5.8□□□□□ -1.48
HLA-DQB1-206ENST00000443574 FABP2P12104 132 aa5.79□□□□□ -1.48
HLA-DQB1-206ENST00000443574 NDUFV3P56181 108 aaKnown RBP5.79□□□□□ -1.48
HLA-DQB1-206ENST00000443574 IGFL1Q6UW32 110 aa5.79□□□□□ -1.48
HLA-DQB1-206ENST00000443574 RNF213Q63HN8 5207 aa5.79□□□□□ -1.48
HLA-DQB1-206ENST00000443574 SCGB1C2P0DMR2 95 aa5.78□□□□□ -1.48
HLA-DQB1-206ENST00000443574 SS18L2Q9UHA2 77 aa5.78□□□□□ -1.48
HLA-DQB1-206ENST00000443574 A0A0G2JQZ4 141 aa5.77□□□□□ -1.49
HLA-DQB1-206ENST00000443574 TRBV7-7A0A0K0K1E9 115 aa5.77□□□□□ -1.49
HLA-DQB1-206ENST00000443574 A0A0U1RQV1 116 aa5.77□□□□□ -1.49
HLA-DQB1-206ENST00000443574 H3BUT2 72 aa5.77□□□□□ -1.49
HLA-DQB1-206ENST00000443574 H3BMG7 143 aa5.76□□□□□ -1.49
HLA-DQB1-206ENST00000443574 TMEM256-PLSCR3K7ERE1 68 aa5.76□□□□□ -1.49
HLA-DQB1-206ENST00000443574 C9orf118A6NHY6 69 aa5.75□□□□□ -1.49
HLA-DQB1-206ENST00000443574 TRACP01848 142 aa5.75□□□□□ -1.49
HLA-DQB1-206ENST00000443574 LYRM7Q5U5X0 104 aa5.75□□□□□ -1.49
HLA-DQB1-206ENST00000443574 LST1O00453 97 aa5.74□□□□□ -1.49
HLA-DQB1-206ENST00000443574 SEC61BP60468 96 aaKnown RBP5.74□□□□□ -1.49
HLA-DQB1-206ENST00000443574 ASB16-AS1Q495Z4 193 aa5.74□□□□□ -1.49
HLA-DQB1-206ENST00000443574 C1orf195Q5TG92 126 aa5.74□□□□□ -1.49
HLA-DQB1-206ENST00000443574 Q6Q795 121 aa5.74□□□□□ -1.49
HLA-DQB1-206ENST00000443574 TEN1Q86WV5 123 aa5.74□□□□□ -1.49
HLA-DQB1-206ENST00000443574 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
HLA-DQB1-206ENST00000443574 KRTAP9-7A8MTY7 169 aa5.73□□□□□ -1.49
HLA-DQB1-206ENST00000443574 LCE1DQ5T752 114 aa5.73□□□□□ -1.49
HLA-DQB1-206ENST00000443574 KRTAP4-7Q9BYR0 210 aa5.73□□□□□ -1.49
HLA-DQB1-206ENST00000443574 LOC105371267A0A1B0GV96 52 aa5.72□□□□□ -1.49
HLA-DQB1-206ENST00000443574 C9orf92A6NGG3 77 aa5.71□□□□□ -1.5
HLA-DQB1-206ENST00000443574 UBE2V1Q13404 147 aa5.71□□□□□ -1.5
HLA-DQB1-206ENST00000443574 ATXN8Q156A1 80 aa5.7□□□□□ -1.5
HLA-DQB1-206ENST00000443574 BATFQ16520 125 aa5.7□□□□□ -1.5
HLA-DQB1-206ENST00000443574 ANKRD29Q8N6D5 301 aa5.7□□□□□ -1.5
HLA-DQB1-206ENST00000443574 A0A087WSZ3 146 aa5.69□□□□□ -1.5
HLA-DQB1-206ENST00000443574 A0A1B0GV72 72 aa5.68□□□□□ -1.5
HLA-DQB1-206ENST00000443574 MUC2Q02817 5179 aa5.67□□□□□ -1.5
HLA-DQB1-206ENST00000443574 TRBV7-4A0A0J9YYF1 115 aa5.67□□□□□ -1.5
HLA-DQB1-206ENST00000443574 DSCR8Q96T75 97 aa5.67□□□□□ -1.5
HLA-DQB1-206ENST00000443574 TRBV20-1A0A075B6N2 111 aa5.66□□□□□ -1.5
HLA-DQB1-206ENST00000443574 CCKP06307 115 aa5.66□□□□□ -1.5
HLA-DQB1-206ENST00000443574 RBM3P98179 157 aaKnown RBP5.66□□□□□ -1.5
HLA-DQB1-206ENST00000443574 C21orf62-AS1Q17RA5 79 aa5.66□□□□□ -1.5
HLA-DQB1-206ENST00000443574 NAA38Q9BRA0 125 aaKnown RBP5.66□□□□□ -1.5
HLA-DQB1-206ENST00000443574 BAALC-AS2P0C853 105 aa5.65□□□□□ -1.5
HLA-DQB1-206ENST00000443574 A0A1W2PNM2 257 aa5.64□□□□□ -1.51
HLA-DQB1-206ENST00000443574 SIGMAR1Q99720 223 aa5.64□□□□□ -1.51
HLA-DQB1-206ENST00000443574 JMJD7-PLA2G4BH0Y9G9 81 aa5.63□□□□□ -1.51
HLA-DQB1-206ENST00000443574 VPS25Q9BRG1 176 aa5.63□□□□□ -1.51
HLA-DQB1-206ENST00000443574 C9JAW5 83 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms