RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 A0A0G2JQZ4 141 aa9.17□□□□□ -0.94
USP39-205ENST00000442708 C4orf48Q5BLP8 95 aa9.17□□□□□ -0.94
USP39-205ENST00000442708 RETNLBQ9BQ08 111 aa9.17□□□□□ -0.94
USP39-205ENST00000442708 A0A1B0GX51 115 aa9.14□□□□□ -0.95
USP39-205ENST00000442708 SPINK1P00995 79 aa9.14□□□□□ -0.95
USP39-205ENST00000442708 PRR4Q16378 134 aa9.14□□□□□ -0.95
USP39-205ENST00000442708 NAA38Q9BRA0 125 aaKnown RBP9.14□□□□□ -0.95
USP39-205ENST00000442708 BATFQ16520 125 aa9.13□□□□□ -0.95
USP39-205ENST00000442708 HRCT1Q6UXD1 115 aa9.13□□□□□ -0.95
USP39-205ENST00000442708 COX6CP09669 75 aa9.12□□□□□ -0.95
USP39-205ENST00000442708 PPDPFLQ8WWR9 84 aa9.12□□□□□ -0.95
USP39-205ENST00000442708 SNCGO76070 127 aa9.11□□□□□ -0.95
USP39-205ENST00000442708 OCIAD2Q56VL3 154 aa9.11□□□□□ -0.95
USP39-205ENST00000442708 IGLV8-61A0A075B6I0 122 aa9.1□□□□□ -0.95
USP39-205ENST00000442708 F8WEM9 126 aa9.09□□□□□ -0.95
USP39-205ENST00000442708 SCGB1C2P0DMR2 95 aa9.09□□□□□ -0.95
USP39-205ENST00000442708 RPS29P62273 56 aaKnown RBP9.09□□□□□ -0.95
USP39-205ENST00000442708 SNHG12Q9BXW3 62 aa9.09□□□□□ -0.95
USP39-205ENST00000442708 LRP2P98164 4655 aa9.08□□□□□ -0.96
USP39-205ENST00000442708 H3BUT2 72 aa9.07□□□□□ -0.96
USP39-205ENST00000442708 LST1O00453 97 aa9.07□□□□□ -0.96
USP39-205ENST00000442708 LPAP08519 4548 aa9.06□□□□□ -0.96
USP39-205ENST00000442708 NDUFV3P56181 108 aaKnown RBP9.06□□□□□ -0.96
USP39-205ENST00000442708 CD164Q04900 197 aa9.06□□□□□ -0.96
USP39-205ENST00000442708 IGFL1Q6UW32 110 aa9.06□□□□□ -0.96
USP39-205ENST00000442708 DNAL4O96015 105 aa9.05□□□□□ -0.96
USP39-205ENST00000442708 FABP2P12104 132 aa9.05□□□□□ -0.96
USP39-205ENST00000442708 TRACP01848 142 aa9.04□□□□□ -0.96
USP39-205ENST00000442708 ORMDL1Q9P0S3 153 aa9.04□□□□□ -0.96
USP39-205ENST00000442708 RNF213Q63HN8 5207 aa9.04□□□□□ -0.96
USP39-205ENST00000442708 TAX1BP3O14907 124 aa9.03□□□□□ -0.96
USP39-205ENST00000442708 TCL1BO95988 128 aa9.03□□□□□ -0.96
USP39-205ENST00000442708 Q6JHZ5 121 aa9.03□□□□□ -0.96
USP39-205ENST00000442708 IGLV7-46A0A075B6I9 117 aa9.01□□□□□ -0.97
USP39-205ENST00000442708 C9orf118A6NHY6 69 aa8.99□□□□□ -0.97
USP39-205ENST00000442708 H3BMG7 143 aa8.99□□□□□ -0.97
USP39-205ENST00000442708 GHRHP01286 108 aa8.99□□□□□ -0.97
USP39-205ENST00000442708 FP248Q71RG6 208 aaPredicted RBP8.99□□□□□ -0.97
USP39-205ENST00000442708 LIMD2Q9BT23 127 aa8.99□□□□□ -0.97
USP39-205ENST00000442708 TMEM256-PLSCR3K7ERE1 68 aa8.98□□□□□ -0.97
USP39-205ENST00000442708 Q5XG85 94 aa8.98□□□□□ -0.97
USP39-205ENST00000442708 A0A1B0GV72 72 aa8.97□□□□□ -0.97
USP39-205ENST00000442708 H3BQ85 93 aa8.97□□□□□ -0.97
USP39-205ENST00000442708 ATXN8Q156A1 80 aa8.97□□□□□ -0.97
USP39-205ENST00000442708 TRBV7-7A0A0K0K1E9 115 aa8.96□□□□□ -0.98
USP39-205ENST00000442708 PCP4L1A6NKN8 68 aa8.96□□□□□ -0.98
USP39-205ENST00000442708 BAALC-AS2P0C853 105 aa8.95□□□□□ -0.98
USP39-205ENST00000442708 UBE2V1Q13404 147 aa8.95□□□□□ -0.98
USP39-205ENST00000442708 TPRXLQ17RH7 258 aa8.95□□□□□ -0.98
USP39-205ENST00000442708 A0A1W2PPM0 123 aa8.94□□□□□ -0.98
USP39-205ENST00000442708 C1orf195Q5TG92 126 aa8.93□□□□□ -0.98
USP39-205ENST00000442708 A0A1W2PNM2 257 aa8.92□□□□□ -0.98
USP39-205ENST00000442708 KRTAP13-3Q3SY46 172 aa8.92□□□□□ -0.98
USP39-205ENST00000442708 LYRM7Q5U5X0 104 aa8.92□□□□□ -0.98
USP39-205ENST00000442708 Q6Q795 121 aa8.92□□□□□ -0.98
USP39-205ENST00000442708 TRBV20-1A0A075B6N2 111 aa8.91□□□□□ -0.98
USP39-205ENST00000442708 ANKRD29Q8N6D5 301 aa8.91□□□□□ -0.98
USP39-205ENST00000442708 COL5A1-AS1Q5SY13 56 aa8.9□□□□□ -0.98
USP39-205ENST00000442708 TEN1Q86WV5 123 aa8.9□□□□□ -0.98
USP39-205ENST00000442708 C9JAW5 83 aa8.88□□□□□ -0.99
USP39-205ENST00000442708 ASB16-AS1Q495Z4 193 aa8.88□□□□□ -0.99
USP39-205ENST00000442708 TRBV7-4A0A0J9YYF1 115 aa8.86□□□□□ -0.99
USP39-205ENST00000442708 CDIP1Q9H305 208 aa8.86□□□□□ -0.99
USP39-205ENST00000442708 A0A087WSZ3 146 aa8.85□□□□□ -0.99
USP39-205ENST00000442708 RBM3P98179 157 aaKnown RBP8.85□□□□□ -0.99
USP39-205ENST00000442708 MTURNQ8N3F0 131 aa8.84□□□□□ -0.99
USP39-205ENST00000442708 CCKP06307 115 aa8.82□□□□□ -1
USP39-205ENST00000442708 SPCS1Q9Y6A9 102 aa8.82□□□□□ -1
USP39-205ENST00000442708 OBSCN-AS1Q96MR7 158 aa8.8□□□□□ -1
USP39-205ENST00000442708 Q96NJ1 140 aa8.8□□□□□ -1
USP39-205ENST00000442708 DSCR8Q96T75 97 aa8.8□□□□□ -1
USP39-205ENST00000442708 C9orf92A6NGG3 77 aa8.79□□□□□ -1
USP39-205ENST00000442708 KRTAP9-2Q9BYQ4 174 aa8.79□□□□□ -1
USP39-205ENST00000442708 SS18L2Q9UHA2 77 aa8.79□□□□□ -1
USP39-205ENST00000442708 JMJD7-PLA2G4BH0Y9G9 81 aa8.78□□□□□ -1
USP39-205ENST00000442708 H3BT86 120 aa8.78□□□□□ -1
USP39-205ENST00000442708 XP32Q5T750 250 aa8.78□□□□□ -1
USP39-205ENST00000442708 Q6ZQT0 140 aa8.77□□□□□ -1.01
USP39-205ENST00000442708 VPS25Q9BRG1 176 aa8.77□□□□□ -1.01
USP39-205ENST00000442708 LOC110117498A0A087WWA1 95 aa8.76□□□□□ -1.01
USP39-205ENST00000442708 C14orf132Q9NPU4 83 aa8.76□□□□□ -1.01
USP39-205ENST00000442708 K7EP34 96 aa8.75□□□□□ -1.01
USP39-205ENST00000442708 SMCPP49901 116 aaPredicted RBP8.75□□□□□ -1.01
USP39-205ENST00000442708 PRO0461Q9UI25 63 aa8.73□□□□□ -1.01
USP39-205ENST00000442708 MUC17Q685J3 4493 aa8.71□□□□□ -1.02
USP39-205ENST00000442708 DEFB116Q30KQ4 102 aa8.7□□□□□ -1.02
USP39-205ENST00000442708 LINC00472Q9H8W2 130 aa8.7□□□□□ -1.02
USP39-205ENST00000442708 PDE6GP18545 87 aa8.68□□□□□ -1.02
USP39-205ENST00000442708 KRTAP9-6A0A140TA67 174 aa8.66□□□□□ -1.02
USP39-205ENST00000442708 IGKV4-1P06312 121 aa8.66□□□□□ -1.02
USP39-205ENST00000442708 MUC2Q02817 5179 aa8.65□□□□□ -1.02
USP39-205ENST00000442708 SIGMAR1Q99720 223 aa8.65□□□□□ -1.02
USP39-205ENST00000442708 GTF2H5Q6ZYL4 71 aa8.64□□□□□ -1.03
USP39-205ENST00000442708 KRTAP4-1Q9BYQ7 146 aa8.64□□□□□ -1.03
USP39-205ENST00000442708 SEC61BP60468 96 aaKnown RBP8.63□□□□□ -1.03
USP39-205ENST00000442708 A0A1B0GW54 56 aa8.62□□□□□ -1.03
USP39-205ENST00000442708 C21orf62-AS1Q17RA5 79 aa8.61□□□□□ -1.03
USP39-205ENST00000442708 DSCR10P59022 87 aa8.6□□□□□ -1.03
USP39-205ENST00000442708 RPL37P61927 97 aaKnown RBP8.59□□□□□ -1.03
USP39-205ENST00000442708 PCOTHQ58A44 107 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms