RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 PSMB2P49721 201 aa9.77□□□□□ -0.84
TARDBP-203ENST00000439080 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.77□□□□□ -0.84
TARDBP-203ENST00000439080 SMIM29Q86T20 159 aa9.77□□□□□ -0.84
TARDBP-203ENST00000439080 SPAG11AQ6PDA7 123 aa9.76□□□□□ -0.85
TARDBP-203ENST00000439080 SNCGO76070 127 aa9.75□□□□□ -0.85
TARDBP-203ENST00000439080 CLEC2BQ92478 149 aa9.74□□□□□ -0.85
TARDBP-203ENST00000439080 COX6CP09669 75 aa9.73□□□□□ -0.85
TARDBP-203ENST00000439080 A0A1B0GX51 115 aa9.72□□□□□ -0.85
TARDBP-203ENST00000439080 SPINK1P00995 79 aa9.71□□□□□ -0.86
TARDBP-203ENST00000439080 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.86
TARDBP-203ENST00000439080 F8WEM9 126 aa9.7□□□□□ -0.86
TARDBP-203ENST00000439080 BATFQ16520 125 aa9.7□□□□□ -0.86
TARDBP-203ENST00000439080 OCIAD2Q56VL3 154 aa9.69□□□□□ -0.86
TARDBP-203ENST00000439080 RETNLBQ9BQ08 111 aa9.69□□□□□ -0.86
TARDBP-203ENST00000439080 PRR4Q16378 134 aa9.68□□□□□ -0.86
TARDBP-203ENST00000439080 DNAL4O96015 105 aa9.67□□□□□ -0.86
TARDBP-203ENST00000439080 RPS29P62273 56 aaKnown RBP9.67□□□□□ -0.86
TARDBP-203ENST00000439080 LPAP08519 4548 aa9.67□□□□□ -0.86
TARDBP-203ENST00000439080 LRP2P98164 4655 aa9.67□□□□□ -0.86
TARDBP-203ENST00000439080 SCGB1C2P0DMR2 95 aa9.65□□□□□ -0.86
TARDBP-203ENST00000439080 HRCT1Q6UXD1 115 aa9.65□□□□□ -0.86
TARDBP-203ENST00000439080 SNHG12Q9BXW3 62 aa9.65□□□□□ -0.86
TARDBP-203ENST00000439080 A0A0G2JQZ4 141 aa9.64□□□□□ -0.87
TARDBP-203ENST00000439080 NAA38Q9BRA0 125 aaKnown RBP9.64□□□□□ -0.87
TARDBP-203ENST00000439080 LST1O00453 97 aa9.63□□□□□ -0.87
TARDBP-203ENST00000439080 GHRHP01286 108 aa9.63□□□□□ -0.87
TARDBP-203ENST00000439080 ORMDL1Q9P0S3 153 aa9.63□□□□□ -0.87
TARDBP-203ENST00000439080 IGLV8-61A0A075B6I0 122 aa9.62□□□□□ -0.87
TARDBP-203ENST00000439080 CD164Q04900 197 aa9.62□□□□□ -0.87
TARDBP-203ENST00000439080 FABP2P12104 132 aa9.61□□□□□ -0.87
TARDBP-203ENST00000439080 LIMD2Q9BT23 127 aa9.61□□□□□ -0.87
TARDBP-203ENST00000439080 H3BUT2 72 aa9.6□□□□□ -0.87
TARDBP-203ENST00000439080 TRACP01848 142 aa9.6□□□□□ -0.87
TARDBP-203ENST00000439080 NDUFV3P56181 108 aaKnown RBP9.6□□□□□ -0.87
TARDBP-203ENST00000439080 Q6JHZ5 121 aa9.6□□□□□ -0.87
TARDBP-203ENST00000439080 IGFL1Q6UW32 110 aa9.59□□□□□ -0.87
TARDBP-203ENST00000439080 H3BQ85 93 aa9.56□□□□□ -0.88
TARDBP-203ENST00000439080 TCL1BO95988 128 aa9.56□□□□□ -0.88
TARDBP-203ENST00000439080 FP248Q71RG6 208 aaPredicted RBP9.56□□□□□ -0.88
TARDBP-203ENST00000439080 IGLV7-46A0A075B6I9 117 aa9.55□□□□□ -0.88
TARDBP-203ENST00000439080 ATXN8Q156A1 80 aa9.55□□□□□ -0.88
TARDBP-203ENST00000439080 LYRM7Q5U5X0 104 aa9.55□□□□□ -0.88
TARDBP-203ENST00000439080 UBR4Q5T4S7 5183 aa9.55□□□□□ -0.88
TARDBP-203ENST00000439080 H3BMG7 143 aa9.54□□□□□ -0.88
TARDBP-203ENST00000439080 TMEM256-PLSCR3K7ERE1 68 aa9.54□□□□□ -0.88
TARDBP-203ENST00000439080 TAX1BP3O14907 124 aa9.54□□□□□ -0.88
TARDBP-203ENST00000439080 C9orf118A6NHY6 69 aa9.52□□□□□ -0.88
TARDBP-203ENST00000439080 A0A1B0GV72 72 aa9.51□□□□□ -0.89
TARDBP-203ENST00000439080 Q5XG85 94 aa9.51□□□□□ -0.89
TARDBP-203ENST00000439080 TRBV7-7A0A0K0K1E9 115 aa9.5□□□□□ -0.89
TARDBP-203ENST00000439080 UBE2V1Q13404 147 aa9.5□□□□□ -0.89
TARDBP-203ENST00000439080 TPRXLQ17RH7 258 aa9.5□□□□□ -0.89
TARDBP-203ENST00000439080 PCP4L1A6NKN8 68 aa9.49□□□□□ -0.89
TARDBP-203ENST00000439080 TRBV20-1A0A075B6N2 111 aa9.48□□□□□ -0.89
TARDBP-203ENST00000439080 A0A1W2PPM0 123 aa9.48□□□□□ -0.89
TARDBP-203ENST00000439080 BAALC-AS2P0C853 105 aa9.47□□□□□ -0.89
TARDBP-203ENST00000439080 COL5A1-AS1Q5SY13 56 aa9.46□□□□□ -0.9
TARDBP-203ENST00000439080 Q6Q795 121 aa9.46□□□□□ -0.9
TARDBP-203ENST00000439080 ANKRD29Q8N6D5 301 aa9.46□□□□□ -0.9
TARDBP-203ENST00000439080 TEN1Q86WV5 123 aa9.45□□□□□ -0.9
TARDBP-203ENST00000439080 KRTAP13-3Q3SY46 172 aa9.43□□□□□ -0.9
TARDBP-203ENST00000439080 C1orf195Q5TG92 126 aa9.43□□□□□ -0.9
TARDBP-203ENST00000439080 CDIP1Q9H305 208 aa9.43□□□□□ -0.9
TARDBP-203ENST00000439080 C9JAW5 83 aa9.42□□□□□ -0.9
TARDBP-203ENST00000439080 A0A1W2PNM2 257 aa9.41□□□□□ -0.9
TARDBP-203ENST00000439080 ASB16-AS1Q495Z4 193 aa9.41□□□□□ -0.9
TARDBP-203ENST00000439080 A0A087WSZ3 146 aa9.39□□□□□ -0.91
TARDBP-203ENST00000439080 TRBV7-4A0A0J9YYF1 115 aa9.39□□□□□ -0.91
TARDBP-203ENST00000439080 RBM3P98179 157 aaKnown RBP9.39□□□□□ -0.91
TARDBP-203ENST00000439080 SS18L2Q9UHA2 77 aa9.39□□□□□ -0.91
TARDBP-203ENST00000439080 SPCS1Q9Y6A9 102 aa9.38□□□□□ -0.91
TARDBP-203ENST00000439080 CCKP06307 115 aa9.37□□□□□ -0.91
TARDBP-203ENST00000439080 DSCR8Q96T75 97 aa9.37□□□□□ -0.91
TARDBP-203ENST00000439080 MTURNQ8N3F0 131 aa9.37□□□□□ -0.91
TARDBP-203ENST00000439080 JMJD7-PLA2G4BH0Y9G9 81 aa9.34□□□□□ -0.91
TARDBP-203ENST00000439080 H3BT86 120 aa9.34□□□□□ -0.91
TARDBP-203ENST00000439080 VPS25Q9BRG1 176 aa9.34□□□□□ -0.91
TARDBP-203ENST00000439080 MUC17Q685J3 4493 aa9.34□□□□□ -0.91
TARDBP-203ENST00000439080 RNF213Q63HN8 5207 aa9.32□□□□□ -0.92
TARDBP-203ENST00000439080 C9orf92A6NGG3 77 aa9.31□□□□□ -0.92
TARDBP-203ENST00000439080 LCE2AQ5TA79 106 aaPredicted RBP9.31□□□□□ -0.92
TARDBP-203ENST00000439080 LOC110117498A0A087WWA1 95 aa9.29□□□□□ -0.92
TARDBP-203ENST00000439080 K7EP34 96 aa9.29□□□□□ -0.92
TARDBP-203ENST00000439080 XP32Q5T750 250 aa9.29□□□□□ -0.92
TARDBP-203ENST00000439080 OBSCN-AS1Q96MR7 158 aa9.29□□□□□ -0.92
TARDBP-203ENST00000439080 Q96NJ1 140 aa9.29□□□□□ -0.92
TARDBP-203ENST00000439080 C14orf132Q9NPU4 83 aa9.29□□□□□ -0.92
TARDBP-203ENST00000439080 Q6ZQT0 140 aa9.28□□□□□ -0.92
TARDBP-203ENST00000439080 LCE2CQ5TA81 110 aa9.27□□□□□ -0.93
TARDBP-203ENST00000439080 PDE6GP18545 87 aa9.24□□□□□ -0.93
TARDBP-203ENST00000439080 SIGMAR1Q99720 223 aa9.23□□□□□ -0.93
TARDBP-203ENST00000439080 PRO0461Q9UI25 63 aa9.22□□□□□ -0.93
TARDBP-203ENST00000439080 C21orf62-AS1Q17RA5 79 aa9.21□□□□□ -0.94
TARDBP-203ENST00000439080 GTF2H5Q6ZYL4 71 aa9.21□□□□□ -0.94
TARDBP-203ENST00000439080 MUC2Q02817 5179 aa9.2□□□□□ -0.94
TARDBP-203ENST00000439080 LINC00472Q9H8W2 130 aa9.2□□□□□ -0.94
TARDBP-203ENST00000439080 IGKV4-1P06312 121 aa9.19□□□□□ -0.94
TARDBP-203ENST00000439080 A0A1B0GW54 56 aa9.18□□□□□ -0.94
TARDBP-203ENST00000439080 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
TARDBP-203ENST00000439080 DEFB116Q30KQ4 102 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms