RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 RANBP2P49792 3224 aaKnown RBP9.43□□□□□ -0.9
NEDD4-202ENST00000435532 LINC00483Q53H64 154 aa9.41□□□□□ -0.9
NEDD4-202ENST00000435532 HRES1P13985 223 aa9.41□□□□□ -0.9
NEDD4-202ENST00000435532 A0A0D9SG42 100 aa9.4□□□□□ -0.9
NEDD4-202ENST00000435532 Q8NDZ9 215 aa9.4□□□□□ -0.9
NEDD4-202ENST00000435532 MMP24-AS1A0A0U1RRL7 71 aa9.39□□□□□ -0.91
NEDD4-202ENST00000435532 C4orf26Q17RF5 130 aa9.39□□□□□ -0.91
NEDD4-202ENST00000435532 TRANK1O15050 2925 aa9.39□□□□□ -0.91
NEDD4-202ENST00000435532 HTTP42858 3142 aa9.37□□□□□ -0.91
NEDD4-202ENST00000435532 CAMK2N1Q7Z7J9 78 aa9.36□□□□□ -0.91
NEDD4-202ENST00000435532 H7BZZ5 65 aa9.35□□□□□ -0.91
NEDD4-202ENST00000435532 CDC42SE1Q9NRR8 79 aa9.35□□□□□ -0.91
NEDD4-202ENST00000435532 BPTFQ12830 3046 aa9.35□□□□□ -0.91
NEDD4-202ENST00000435532 OCR1Q9BZK8 76 aa9.34□□□□□ -0.91
NEDD4-202ENST00000435532 SPINK7P58062 85 aa9.33□□□□□ -0.92
NEDD4-202ENST00000435532 LINC00472Q9H8W2 130 aa9.33□□□□□ -0.92
NEDD4-202ENST00000435532 C5orf42Q9H799 3197 aa9.31□□□□□ -0.92
NEDD4-202ENST00000435532 Q5W150 140 aa9.27□□□□□ -0.92
NEDD4-202ENST00000435532 PANO1I0J062 215 aa9.27□□□□□ -0.93
NEDD4-202ENST00000435532 Q6ZRN7 208 aaPredicted RBP9.26□□□□□ -0.93
NEDD4-202ENST00000435532 TEX15Q9BXT5 2789 aa9.25□□□□□ -0.93
NEDD4-202ENST00000435532 A0A1B0GU33 70 aa9.25□□□□□ -0.93
NEDD4-202ENST00000435532 DSPP15924 2871 aaKnown RBP9.24□□□□□ -0.93
NEDD4-202ENST00000435532 RPS29P62273 56 aaKnown RBP9.22□□□□□ -0.93
NEDD4-202ENST00000435532 Q8N9P0 234 aaPredicted RBP9.22□□□□□ -0.93
NEDD4-202ENST00000435532 AKAP13Q12802 2813 aa9.2□□□□□ -0.94
NEDD4-202ENST00000435532 KRTAP4-16G5E9R7 235 aaPredicted RBP9.17□□□□□ -0.94
NEDD4-202ENST00000435532 R4GN34 69 aa9.17□□□□□ -0.94
NEDD4-202ENST00000435532 DMAC1Q96GE9 116 aa9.16□□□□□ -0.94
NEDD4-202ENST00000435532 NOTCH1P46531 2555 aa9.15□□□□□ -0.94
NEDD4-202ENST00000435532 A0A087X002 238 aa9.15□□□□□ -0.94
NEDD4-202ENST00000435532 PCNTO95613 3336 aa9.15□□□□□ -0.95
NEDD4-202ENST00000435532 A0A0C4DFX4 3053 aa9.13□□□□□ -0.95
NEDD4-202ENST00000435532 NBEAL1Q6ZS30 2694 aa9.13□□□□□ -0.95
NEDD4-202ENST00000435532 MGAQ8IWI9 3026 aa9.11□□□□□ -0.95
NEDD4-202ENST00000435532 ASB16-AS1Q495Z4 193 aa9.08□□□□□ -0.96
NEDD4-202ENST00000435532 LAMA3Q16787 3333 aa9.06□□□□□ -0.96
NEDD4-202ENST00000435532 Q1T7F1 81 aa9.05□□□□□ -0.96
NEDD4-202ENST00000435532 PLAC4Q8WY50 150 aa9.02□□□□□ -0.97
NEDD4-202ENST00000435532 LINC01558Q9Y6Z2 57 aa9.01□□□□□ -0.97
NEDD4-202ENST00000435532 KMT2BQ9UMN6 2715 aaPredicted RBP8.99□□□□□ -0.97
NEDD4-202ENST00000435532 LCA10Q71F78 164 aa8.99□□□□□ -0.97
NEDD4-202ENST00000435532 M0QZ58 72 aa8.98□□□□□ -0.97
NEDD4-202ENST00000435532 Q75L30 129 aa8.97□□□□□ -0.97
NEDD4-202ENST00000435532 Q5XG85 94 aa8.96□□□□□ -0.98
NEDD4-202ENST00000435532 KRTAP11-1Q8IUC1 163 aa8.95□□□□□ -0.98
NEDD4-202ENST00000435532 FLNCQ14315 2725 aa8.95□□□□□ -0.98
NEDD4-202ENST00000435532 MKI67P46013 3256 aaKnown RBP8.94□□□□□ -0.98
NEDD4-202ENST00000435532 H1FX-AS1Q4G0G2 97 aa8.94□□□□□ -0.98
NEDD4-202ENST00000435532 ITPR2Q14571 2701 aa8.94□□□□□ -0.98
NEDD4-202ENST00000435532 LUZP6Q538Z0 58 aa8.92□□□□□ -0.98
NEDD4-202ENST00000435532 KTN1-AS1Q86SY8 53 aa8.91□□□□□ -0.98
NEDD4-202ENST00000435532 KRTAP13-2Q52LG2 175 aa8.91□□□□□ -0.98
NEDD4-202ENST00000435532 UBR5O95071 2799 aaPredicted RBP8.9□□□□□ -0.98
NEDD4-202ENST00000435532 KRTAP13-1Q8IUC0 172 aa8.9□□□□□ -0.98
NEDD4-202ENST00000435532 RPL37P61927 97 aaKnown RBP8.9□□□□□ -0.98
NEDD4-202ENST00000435532 ADM2Q7Z4H4 148 aa8.9□□□□□ -0.99
NEDD4-202ENST00000435532 HIVEP1P15822 2718 aa8.89□□□□□ -0.99
NEDD4-202ENST00000435532 PRUNE2Q8WUY3 3088 aa8.88□□□□□ -0.99
NEDD4-202ENST00000435532 KRTAP7-1Q8IUC3 87 aa8.87□□□□□ -0.99
NEDD4-202ENST00000435532 TNRC18O15417 2968 aaPredicted RBP8.86□□□□□ -0.99
NEDD4-202ENST00000435532 KRTAP29-1A8MX34 341 aaPredicted RBP8.85□□□□□ -0.99
NEDD4-202ENST00000435532 NSD1Q96L73 2696 aaPredicted RBP8.83□□□□□ -1
NEDD4-202ENST00000435532 WDFY4Q6ZS81 3184 aa8.83□□□□□ -1
NEDD4-202ENST00000435532 TENM4Q6N022 2769 aa8.8□□□□□ -1
NEDD4-202ENST00000435532 MAP1AP78559 2803 aaPredicted RBP8.78□□□□□ -1
NEDD4-202ENST00000435532 TRIOO75962 3097 aa8.78□□□□□ -1
NEDD4-202ENST00000435532 STAB2Q8WWQ8 2551 aa8.76□□□□□ -1.01
NEDD4-202ENST00000435532 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
NEDD4-202ENST00000435532 C20orf166-AS1Q96NR2 134 aa8.75□□□□□ -1.01
NEDD4-202ENST00000435532 BRCA2P51587 3418 aa8.73□□□□□ -1.01
NEDD4-202ENST00000435532 ITPR1Q14643 2758 aa8.73□□□□□ -1.01
NEDD4-202ENST00000435532 A8MUU9 505 aa8.67□□□□□ -1.02
NEDD4-202ENST00000435532 ROMO1P60602 79 aa8.67□□□□□ -1.02
NEDD4-202ENST00000435532 Q5VV11 94 aa8.65□□□□□ -1.02
NEDD4-202ENST00000435532 CFAP54Q96N23 3096 aa8.62□□□□□ -1.03
NEDD4-202ENST00000435532 FRYLO94915 3013 aa8.6□□□□□ -1.03
NEDD4-202ENST00000435532 APCP25054 2843 aa8.59□□□□□ -1.03
NEDD4-202ENST00000435532 REV3LO60673 3130 aa8.59□□□□□ -1.03
NEDD4-202ENST00000435532 CYSTM1Q9H1C7 97 aa8.58□□□□□ -1.04
NEDD4-202ENST00000435532 SPATA8Q6RVD6 105 aa8.57□□□□□ -1.04
NEDD4-202ENST00000435532 NBEAL2Q6ZNJ1 2754 aa8.56□□□□□ -1.04
NEDD4-202ENST00000435532 KRTAP1-4P0C5Y4 121 aa8.56□□□□□ -1.04
NEDD4-202ENST00000435532 TPRXLQ17RH7 258 aa8.55□□□□□ -1.04
NEDD4-202ENST00000435532 UTP20O75691 2785 aaKnown RBP8.54□□□□□ -1.04
NEDD4-202ENST00000435532 XP32Q5T750 250 aa8.52□□□□□ -1.05
NEDD4-202ENST00000435532 COL12A1Q99715 3063 aa8.51□□□□□ -1.05
NEDD4-202ENST00000435532 FRYQ5TBA9 3013 aa8.5□□□□□ -1.05
NEDD4-202ENST00000435532 DMBT1Q9UGM3 2413 aaPredicted RBP8.5□□□□□ -1.05
NEDD4-202ENST00000435532 LAMA2P24043 3122 aaKnown RBP8.47□□□□□ -1.05
NEDD4-202ENST00000435532 ATMQ13315 3056 aa8.47□□□□□ -1.05
NEDD4-202ENST00000435532 COL6A3P12111 3177 aa8.46□□□□□ -1.06
NEDD4-202ENST00000435532 CDH23Q9H251 3354 aa8.46□□□□□ -1.06
NEDD4-202ENST00000435532 ASH1LQ9NR48 2969 aaKnown RBP8.46□□□□□ -1.06
NEDD4-202ENST00000435532 A0A1B0GVY2 172 aa8.45□□□□□ -1.06
NEDD4-202ENST00000435532 DMXL2Q8TDJ6 3036 aa8.45□□□□□ -1.06
NEDD4-202ENST00000435532 TACC2O95359 2948 aa8.45□□□□□ -1.06
NEDD4-202ENST00000435532 SZT2Q5T011 3432 aa8.44□□□□□ -1.06
NEDD4-202ENST00000435532 EYSQ5T1H1 3165 aa8.42□□□□□ -1.06
NEDD4-202ENST00000435532 UNC80Q8N2C7 3258 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms