RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 RTL8CO15255 209 aa2.39□□□□□ -2.03
SHPRH-205ENST00000433355 A0A087WVE0 104 aa2.39□□□□□ -2.03
SHPRH-205ENST00000433355 MRPL34Q9BQ48 92 aaKnown RBP2.39□□□□□ -2.03
SHPRH-205ENST00000433355 FP248Q71RG6 208 aaPredicted RBP2.39□□□□□ -2.03
SHPRH-205ENST00000433355 IGLV7-46A0A075B6I9 117 aa2.39□□□□□ -2.03
SHPRH-205ENST00000433355 SPINK6Q6UWN8 80 aa2.38□□□□□ -2.03
SHPRH-205ENST00000433355 DEFB105AQ8NG35 78 aa2.38□□□□□ -2.03
SHPRH-205ENST00000433355 A6NED7 52 aa2.38□□□□□ -2.03
SHPRH-205ENST00000433355 C8orf17Q9NRJ1 99 aa2.38□□□□□ -2.03
SHPRH-205ENST00000433355 Q75L30 129 aa2.38□□□□□ -2.03
SHPRH-205ENST00000433355 Q9UF83 564 aa2.38□□□□□ -2.03
SHPRH-205ENST00000433355 KRTAP10-11P60412 298 aa2.38□□□□□ -2.03
SHPRH-205ENST00000433355 IGLV7-43P04211 117 aa2.37□□□□□ -2.03
SHPRH-205ENST00000433355 PRB4P10163 310 aaPredicted RBP2.37□□□□□ -2.03
SHPRH-205ENST00000433355 A0A1W2PNM2 257 aa2.37□□□□□ -2.03
SHPRH-205ENST00000433355 ZCCHC13Q8WW36 166 aaKnown RBP2.37□□□□□ -2.03
SHPRH-205ENST00000433355 PRLHP81277 87 aa2.37□□□□□ -2.03
SHPRH-205ENST00000433355 RBM12B-AS1Q9P1G2 102 aa2.37□□□□□ -2.03
SHPRH-205ENST00000433355 SMIM29Q86T20 159 aa2.37□□□□□ -2.03
SHPRH-205ENST00000433355 SELENOKQ9Y6D0 94 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 PRR3P79522 188 aaKnown RBP2.36□□□□□ -2.03
SHPRH-205ENST00000433355 SERTAD4-AS1Q5TG53 156 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 DMXL1Q9Y485 3027 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 PRR26Q8N8Z3 221 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 CDC42SE1Q9NRR8 79 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 SRCAPQ6ZRS2 3230 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 FREM2Q5SZK8 3169 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 DSCR10P59022 87 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 PHF5AQ7RTV0 110 aaKnown RBP2.36□□□□□ -2.03
SHPRH-205ENST00000433355 UQCR11O14957 56 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 DEFB104AQ8WTQ1 72 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 DMAC1Q96GE9 116 aa2.36□□□□□ -2.03
SHPRH-205ENST00000433355 GOLGB1Q14789 3259 aaKnown RBP2.35□□□□□ -2.03
SHPRH-205ENST00000433355 LINC00313P59037 77 aa2.35□□□□□ -2.03
SHPRH-205ENST00000433355 KRTAP13-1Q8IUC0 172 aa2.35□□□□□ -2.03
SHPRH-205ENST00000433355 LINC00304Q8N9R0 145 aa2.35□□□□□ -2.03
SHPRH-205ENST00000433355 COX6B2Q6YFQ2 88 aa2.35□□□□□ -2.03
SHPRH-205ENST00000433355 LAMA3Q16787 3333 aa2.34□□□□□ -2.03
SHPRH-205ENST00000433355 KRTAP29-1A8MX34 341 aaPredicted RBP2.34□□□□□ -2.03
SHPRH-205ENST00000433355 SNURFQ9Y675 71 aa2.34□□□□□ -2.03
SHPRH-205ENST00000433355 LAMA1P25391 3075 aa2.34□□□□□ -2.04
SHPRH-205ENST00000433355 PRM2P04554 102 aa2.34□□□□□ -2.04
SHPRH-205ENST00000433355 KRTAP10-3P60369 221 aa2.33□□□□□ -2.04
SHPRH-205ENST00000433355 Q6ZRN7 208 aaPredicted RBP2.33□□□□□ -2.04
SHPRH-205ENST00000433355 MMP24-AS1A0A0U1RRL7 71 aa2.33□□□□□ -2.04
SHPRH-205ENST00000433355 RETNQ9HD89 108 aa2.33□□□□□ -2.04
SHPRH-205ENST00000433355 LRCOL1A6NCL2 159 aa2.32□□□□□ -2.04
SHPRH-205ENST00000433355 PMAIP1Q13794 54 aa2.32□□□□□ -2.04
SHPRH-205ENST00000433355 RETNLBQ9BQ08 111 aa2.32□□□□□ -2.04
SHPRH-205ENST00000433355 SMR3AQ99954 134 aa2.32□□□□□ -2.04
SHPRH-205ENST00000433355 ANAPC11Q9NYG5 84 aa2.32□□□□□ -2.04
SHPRH-205ENST00000433355 LINC01558Q9Y6Z2 57 aa2.32□□□□□ -2.04
SHPRH-205ENST00000433355 COA5Q86WW8 74 aa2.31□□□□□ -2.04
SHPRH-205ENST00000433355 PCNTO95613 3336 aa2.31□□□□□ -2.04
SHPRH-205ENST00000433355 Q6ZSA8 131 aa2.31□□□□□ -2.04
SHPRH-205ENST00000433355 EYSQ5T1H1 3165 aa2.31□□□□□ -2.04
SHPRH-205ENST00000433355 IGLV9-49A0A0B4J1Y8 123 aa2.31□□□□□ -2.04
SHPRH-205ENST00000433355 KTN1-AS1Q86SY8 53 aa2.31□□□□□ -2.04
SHPRH-205ENST00000433355 A0A1B0GU69 56 aa2.3□□□□□ -2.04
SHPRH-205ENST00000433355 HRCT1Q6UXD1 115 aa2.3□□□□□ -2.04
SHPRH-205ENST00000433355 Q8N9P0 234 aaPredicted RBP2.3□□□□□ -2.04
SHPRH-205ENST00000433355 LY6G6CO95867 125 aa2.29□□□□□ -2.04
SHPRH-205ENST00000433355 SCXQ7RTU7 201 aa2.29□□□□□ -2.04
SHPRH-205ENST00000433355 CELSR1Q9NYQ6 3014 aa2.29□□□□□ -2.04
SHPRH-205ENST00000433355 TYMSOSQ8TAI1 123 aa2.28□□□□□ -2.04
SHPRH-205ENST00000433355 CIRBP-AS1Q8TBR5 109 aa2.28□□□□□ -2.04
SHPRH-205ENST00000433355 CASC10Q5T4H9 136 aa2.28□□□□□ -2.04
SHPRH-205ENST00000433355 USP34Q70CQ2 3546 aa2.28□□□□□ -2.04
SHPRH-205ENST00000433355 COL7A1Q02388 2944 aa2.28□□□□□ -2.04
SHPRH-205ENST00000433355 SZT2Q5T011 3432 aa2.28□□□□□ -2.05
SHPRH-205ENST00000433355 FAM168BA1KXE4 195 aa2.27□□□□□ -2.05
SHPRH-205ENST00000433355 REV3LO60673 3130 aa2.27□□□□□ -2.05
SHPRH-205ENST00000433355 CHTF8P0CG12 524 aa2.27□□□□□ -2.05
SHPRH-205ENST00000433355 KRTAP1-5Q9BYS1 174 aa2.26□□□□□ -2.05
SHPRH-205ENST00000433355 COL6A3P12111 3177 aa2.26□□□□□ -2.05
SHPRH-205ENST00000433355 Q8NDZ9 215 aa2.26□□□□□ -2.05
SHPRH-205ENST00000433355 MKI67P46013 3256 aaKnown RBP2.25□□□□□ -2.05
SHPRH-205ENST00000433355 A0A1W2PNN7 141 aa2.25□□□□□ -2.05
SHPRH-205ENST00000433355 OXTP01178 125 aa2.25□□□□□ -2.05
SHPRH-205ENST00000433355 IGKV2-30P06310 120 aa2.24□□□□□ -2.05
SHPRH-205ENST00000433355 IGKV2D-30A0A075B6S6 120 aa2.23□□□□□ -2.05
SHPRH-205ENST00000433355 CFAP47Q6ZTR5 3102 aa2.23□□□□□ -2.05
SHPRH-205ENST00000433355 MIR22HGQ0VDD5 57 aa2.23□□□□□ -2.05
SHPRH-205ENST00000433355 PSPHP1O15172 72 aa2.22□□□□□ -2.05
SHPRH-205ENST00000433355 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.22□□□□□ -2.05
SHPRH-205ENST00000433355 A8MUU9 505 aa2.22□□□□□ -2.05
SHPRH-205ENST00000433355 Q5W150 140 aa2.22□□□□□ -2.05
SHPRH-205ENST00000433355 M0QZ58 72 aa2.22□□□□□ -2.05
SHPRH-205ENST00000433355 SPATA8Q6RVD6 105 aa2.22□□□□□ -2.05
SHPRH-205ENST00000433355 C20orf166-AS1Q96NR2 134 aa2.22□□□□□ -2.05
SHPRH-205ENST00000433355 LCA10Q71F78 164 aa2.21□□□□□ -2.05
SHPRH-205ENST00000433355 UNC80Q8N2C7 3258 aa2.21□□□□□ -2.05
SHPRH-205ENST00000433355 SEC61BP60468 96 aaKnown RBP2.21□□□□□ -2.06
SHPRH-205ENST00000433355 Q96NJ1 140 aa2.21□□□□□ -2.06
SHPRH-205ENST00000433355 HRES1P13985 223 aa2.21□□□□□ -2.06
SHPRH-205ENST00000433355 Q5VV11 94 aa2.2□□□□□ -2.06
SHPRH-205ENST00000433355 UTRNP46939 3433 aa2.19□□□□□ -2.06
SHPRH-205ENST00000433355 PANO1I0J062 215 aa2.19□□□□□ -2.06
SHPRH-205ENST00000433355 BRCA2P51587 3418 aa2.19□□□□□ -2.06
SHPRH-205ENST00000433355 PCOTHQ58A44 107 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms