RNA–Protein interactions for RNA: ENST00000430888.1

LINC01553-201, Transcript of long intergenic non-protein coding RNA 1553, humanhuman

Gene LINC01553, Length 387 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01553-201ENST00000430888 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
LINC01553-201ENST00000430888 TENM4Q6N022 2769 aa0.83□□□□□ -2.28
LINC01553-201ENST00000430888 CSMD3Q7Z407 3707 aa0.82□□□□□ -2.28
LINC01553-201ENST00000430888 ZNF469Q96JG9 3925 aaPredicted RBP0.82□□□□□ -2.28
LINC01553-201ENST00000430888 ANK2Q01484 3957 aa0.82□□□□□ -2.28
LINC01553-201ENST00000430888 NOTCH1P46531 2555 aa0.81□□□□□ -2.28
LINC01553-201ENST00000430888 RPS27P42677 84 aaKnown RBP0.81□□□□□ -2.28
LINC01553-201ENST00000430888 RPS27LQ71UM5 84 aaKnown RBP0.81□□□□□ -2.28
LINC01553-201ENST00000430888 LINC00308Q8TCZ7 52 aa0.81□□□□□ -2.28
LINC01553-201ENST00000430888 WNK2Q9Y3S1 2297 aa0.81□□□□□ -2.28
LINC01553-201ENST00000430888 TOGARAM1Q9Y4F4 1720 aa0.81□□□□□ -2.28
LINC01553-201ENST00000430888 CDC42BPAQ5VT25 1732 aa0.8□□□□□ -2.28
LINC01553-201ENST00000430888 MUC16Q8WXI7 14507 aa0.8□□□□□ -2.28
LINC01553-201ENST00000430888 WT1-ASQ06250 92 aa0.79□□□□□ -2.28
LINC01553-201ENST00000430888 SMIM27A0A1W2PRY6 76 aa0.78□□□□□ -2.28
LINC01553-201ENST00000430888 M0R2T5 61 aa0.78□□□□□ -2.28
LINC01553-201ENST00000430888 VWFP04275 2813 aa0.78□□□□□ -2.29
LINC01553-201ENST00000430888 A0A1B0GUL6 1792 aa0.78□□□□□ -2.29
LINC01553-201ENST00000430888 REV3LO60673 3130 aa0.77□□□□□ -2.29
LINC01553-201ENST00000430888 LINC01546A6NGU7 62 aa0.77□□□□□ -2.29
LINC01553-201ENST00000430888 DEFB135Q30KP9 77 aa0.77□□□□□ -2.29
LINC01553-201ENST00000430888 ABRACLQ9P1F3 81 aa0.77□□□□□ -2.29
LINC01553-201ENST00000430888 KNL1Q8NG31 2342 aa0.77□□□□□ -2.29
LINC01553-201ENST00000430888 TOMM5Q8N4H5 51 aa0.76□□□□□ -2.29
LINC01553-201ENST00000430888 H0YGG7 62 aa0.75□□□□□ -2.29
LINC01553-201ENST00000430888 H3BUA1 57 aa0.75□□□□□ -2.29
LINC01553-201ENST00000430888 S4R3F8 94 aa0.74□□□□□ -2.29
LINC01553-201ENST00000430888 IQGAP2Q13576 1575 aa0.74□□□□□ -2.29
LINC01553-201ENST00000430888 ALMS1Q8TCU4 4167 aa0.73□□□□□ -2.29
LINC01553-201ENST00000430888 PRLHP81277 87 aa0.73□□□□□ -2.29
LINC01553-201ENST00000430888 CHD6Q8TD26 2715 aa0.72□□□□□ -2.29
LINC01553-201ENST00000430888 ABCA2Q9BZC7 2435 aa0.72□□□□□ -2.29
LINC01553-201ENST00000430888 PDE4DIPQ5VU43 2346 aa0.72□□□□□ -2.29
LINC01553-201ENST00000430888 DEFB106AQ8N104 65 aa0.71□□□□□ -2.3
LINC01553-201ENST00000430888 LMO7Q8WWI1 1683 aa0.71□□□□□ -2.3
LINC01553-201ENST00000430888 CSPG4Q6UVK1 2322 aa0.71□□□□□ -2.3
LINC01553-201ENST00000430888 ATRQ13535 2644 aa0.7□□□□□ -2.3
LINC01553-201ENST00000430888 PRM1P04553 51 aa0.7□□□□□ -2.3
LINC01553-201ENST00000430888 TIMM8BQ9Y5J9 83 aaPredicted RBP0.69□□□□□ -2.3
LINC01553-201ENST00000430888 SPTA1P02549 2419 aa0.69□□□□□ -2.3
LINC01553-201ENST00000430888 TRANK1O15050 2925 aa0.69□□□□□ -2.3
LINC01553-201ENST00000430888 UNC79Q9P2D8 2635 aa0.68□□□□□ -2.3
LINC01553-201ENST00000430888 NCOR1O75376 2440 aa0.67□□□□□ -2.3
LINC01553-201ENST00000430888 OTOGQ6ZRI0 2925 aa0.67□□□□□ -2.3
LINC01553-201ENST00000430888 KRTAP21-1Q3LI58 79 aa0.67□□□□□ -2.3
LINC01553-201ENST00000430888 ZFYVE26Q68DK2 2539 aa0.67□□□□□ -2.3
LINC01553-201ENST00000430888 IQGAP1P46940 1657 aa0.66□□□□□ -2.3
LINC01553-201ENST00000430888 DSPP15924 2871 aaKnown RBP0.66□□□□□ -2.3
LINC01553-201ENST00000430888 IGF2RP11717 2491 aa0.65□□□□□ -2.3
LINC01553-201ENST00000430888 DDX60Q8IY21 1712 aaKnown RBP0.65□□□□□ -2.31
LINC01553-201ENST00000430888 TNXBP22105 4242 aa0.65□□□□□ -2.31
LINC01553-201ENST00000430888 FAM208AQ9UK61 1670 aaKnown RBP0.65□□□□□ -2.31
LINC01553-201ENST00000430888 KIF21BO75037 1637 aa0.64□□□□□ -2.31
LINC01553-201ENST00000430888 SMIM2Q9BVW6 85 aa0.64□□□□□ -2.31
LINC01553-201ENST00000430888 BSNQ9UPA5 3926 aa0.64□□□□□ -2.31
LINC01553-201ENST00000430888 TFF3Q07654 80 aa0.63□□□□□ -2.31
LINC01553-201ENST00000430888 PTPN13Q12923 2485 aa0.63□□□□□ -2.31
LINC01553-201ENST00000430888 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
LINC01553-201ENST00000430888 CHD8Q9HCK8 2581 aa0.62□□□□□ -2.31
LINC01553-201ENST00000430888 FAT2Q9NYQ8 4349 aa0.62□□□□□ -2.31
LINC01553-201ENST00000430888 NOP10Q9NPE3 64 aaKnown RBP0.62□□□□□ -2.31
LINC01553-201ENST00000430888 WFDC10BQ8IUB3 73 aa0.61□□□□□ -2.31
LINC01553-201ENST00000430888 KAAG1Q9UBP8 84 aa0.61□□□□□ -2.31
LINC01553-201ENST00000430888 PCNX1Q96RV3 2341 aa0.61□□□□□ -2.31
LINC01553-201ENST00000430888 SPRR2DP22532 72 aa0.6□□□□□ -2.31
LINC01553-201ENST00000430888 PRKDCP78527 4128 aaKnown RBP0.6□□□□□ -2.31
LINC01553-201ENST00000430888 PKD1L1Q8TDX9 2849 aa0.6□□□□□ -2.31
LINC01553-201ENST00000430888 HUWE1Q7Z6Z7 4374 aaKnown RBP0.59□□□□□ -2.31
LINC01553-201ENST00000430888 IGLV5-48A0A075B6I7 105 aa0.58□□□□□ -2.32
LINC01553-201ENST00000430888 AKAP13Q12802 2813 aa0.58□□□□□ -2.32
LINC01553-201ENST00000430888 C9orf92A6NGG3 77 aa0.57□□□□□ -2.32
LINC01553-201ENST00000430888 NFAT5O94916 1531 aa0.57□□□□□ -2.32
LINC01553-201ENST00000430888 LRP1Q07954 4544 aaKnown RBP0.57□□□□□ -2.32
LINC01553-201ENST00000430888 SYNE1Q8NF91 8797 aaKnown RBP0.56□□□□□ -2.32
LINC01553-201ENST00000430888 TRPM2O94759 1503 aa0.55□□□□□ -2.32
LINC01553-201ENST00000430888 TOP2AP11388 1531 aaKnown RBP0.55□□□□□ -2.32
LINC01553-201ENST00000430888 ATP7AQ04656 1500 aa0.55□□□□□ -2.32
LINC01553-201ENST00000430888 PRRC2CQ9Y520 2896 aaKnown RBP0.55□□□□□ -2.32
LINC01553-201ENST00000430888 HECTD1Q9ULT8 2610 aa0.55□□□□□ -2.32
LINC01553-201ENST00000430888 USP24Q9UPU5 2620 aa0.55□□□□□ -2.32
LINC01553-201ENST00000430888 NAV2Q8IVL1 2488 aa0.55□□□□□ -2.32
LINC01553-201ENST00000430888 NDUFA1O15239 70 aa0.54□□□□□ -2.32
LINC01553-201ENST00000430888 DEFB131AP59861 70 aa0.54□□□□□ -2.32
LINC01553-201ENST00000430888 TENM3Q9P273 2699 aa0.54□□□□□ -2.32
LINC01553-201ENST00000430888 NCOR2Q9Y618 2525 aa0.54□□□□□ -2.32
LINC01553-201ENST00000430888 SPRR2BP35325 72 aa0.53□□□□□ -2.32
LINC01553-201ENST00000430888 UBR5O95071 2799 aaPredicted RBP0.52□□□□□ -2.33
LINC01553-201ENST00000430888 CELSR1Q9NYQ6 3014 aa0.52□□□□□ -2.33
LINC01553-201ENST00000430888 MYCBP2O75592 4640 aa0.52□□□□□ -2.33
LINC01553-201ENST00000430888 HIVEP3Q5T1R4 2406 aa0.52□□□□□ -2.33
LINC01553-201ENST00000430888 SAMD9LQ8IVG5 1584 aa0.51□□□□□ -2.33
LINC01553-201ENST00000430888 AHNAKQ09666 5890 aaKnown RBP0.51□□□□□ -2.33
LINC01553-201ENST00000430888 H3BNG1 76 aa0.5□□□□□ -2.33
LINC01553-201ENST00000430888 ACANP16112 2415 aa0.49□□□□□ -2.33
LINC01553-201ENST00000430888 TNRC18O15417 2968 aaPredicted RBP0.49□□□□□ -2.33
LINC01553-201ENST00000430888 MMP24-AS1A0A0U1RRL7 71 aa0.49□□□□□ -2.33
LINC01553-201ENST00000430888 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
LINC01553-201ENST00000430888 LPAP08519 4548 aa0.48□□□□□ -2.33
LINC01553-201ENST00000430888 CREBBPQ92793 2442 aa0.48□□□□□ -2.33
LINC01553-201ENST00000430888 WNK1Q9H4A3 2382 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms