RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.73□□□□□ -0.85
UBE3D-204ENST00000430071 MUC2Q02817 5179 aa9.72□□□□□ -0.85
UBE3D-204ENST00000430071 Q8NBF4 154 aa9.71□□□□□ -0.86
UBE3D-204ENST00000430071 LAMTOR3Q9UHA4 124 aa9.71□□□□□ -0.86
UBE3D-204ENST00000430071 COX6CP09669 75 aa9.7□□□□□ -0.86
UBE3D-204ENST00000430071 NAA38Q9BRA0 125 aaKnown RBP9.7□□□□□ -0.86
UBE3D-204ENST00000430071 A0A1B0GX51 115 aa9.69□□□□□ -0.86
UBE3D-204ENST00000430071 C9orf153Q5TBE3 101 aa9.69□□□□□ -0.86
UBE3D-204ENST00000430071 SNCGO76070 127 aa9.68□□□□□ -0.86
UBE3D-204ENST00000430071 SSBP3-AS1Q7Z2R9 100 aa9.68□□□□□ -0.86
UBE3D-204ENST00000430071 SCGB1C2P0DMR2 95 aa9.66□□□□□ -0.86
UBE3D-204ENST00000430071 SNHG12Q9BXW3 62 aa9.65□□□□□ -0.86
UBE3D-204ENST00000430071 PPDPFLQ8WWR9 84 aa9.64□□□□□ -0.87
UBE3D-204ENST00000430071 IGLV7-46A0A075B6I9 117 aa9.63□□□□□ -0.87
UBE3D-204ENST00000430071 OCIAD2Q56VL3 154 aa9.63□□□□□ -0.87
UBE3D-204ENST00000430071 PCP4L1A6NKN8 68 aa9.63□□□□□ -0.87
UBE3D-204ENST00000430071 LST1O00453 97 aa9.63□□□□□ -0.87
UBE3D-204ENST00000430071 TAX1BP3O14907 124 aa9.63□□□□□ -0.87
UBE3D-204ENST00000430071 SPAG11AQ6PDA7 123 aa9.62□□□□□ -0.87
UBE3D-204ENST00000430071 C4orf48Q5BLP8 95 aa9.61□□□□□ -0.87
UBE3D-204ENST00000430071 A0A0G2JQZ4 141 aa9.6□□□□□ -0.87
UBE3D-204ENST00000430071 H3BUT2 72 aa9.6□□□□□ -0.87
UBE3D-204ENST00000430071 DNAL4O96015 105 aa9.6□□□□□ -0.87
UBE3D-204ENST00000430071 TRACP01848 142 aa9.6□□□□□ -0.87
UBE3D-204ENST00000430071 F8WEM9 126 aa9.59□□□□□ -0.87
UBE3D-204ENST00000430071 TPRXLQ17RH7 258 aa9.59□□□□□ -0.87
UBE3D-204ENST00000430071 MUC17Q685J3 4493 aa9.59□□□□□ -0.87
UBE3D-204ENST00000430071 IGLV8-61A0A075B6I0 122 aa9.58□□□□□ -0.88
UBE3D-204ENST00000430071 C9orf118A6NHY6 69 aa9.58□□□□□ -0.88
UBE3D-204ENST00000430071 TCL1BO95988 128 aa9.58□□□□□ -0.88
UBE3D-204ENST00000430071 SPINK1P00995 79 aa9.58□□□□□ -0.88
UBE3D-204ENST00000430071 FABP2P12104 132 aa9.57□□□□□ -0.88
UBE3D-204ENST00000430071 CDIP1Q9H305 208 aa9.57□□□□□ -0.88
UBE3D-204ENST00000430071 ORMDL1Q9P0S3 153 aa9.57□□□□□ -0.88
UBE3D-204ENST00000430071 NDUFV3P56181 108 aaKnown RBP9.56□□□□□ -0.88
UBE3D-204ENST00000430071 GHRHP01286 108 aa9.55□□□□□ -0.88
UBE3D-204ENST00000430071 HRCT1Q6UXD1 115 aa9.55□□□□□ -0.88
UBE3D-204ENST00000430071 ATXN8Q156A1 80 aa9.54□□□□□ -0.88
UBE3D-204ENST00000430071 A0A1W2PPM0 123 aa9.53□□□□□ -0.88
UBE3D-204ENST00000430071 COL5A1-AS1Q5SY13 56 aa9.53□□□□□ -0.88
UBE3D-204ENST00000430071 LYRM7Q5U5X0 104 aa9.53□□□□□ -0.88
UBE3D-204ENST00000430071 IGFL1Q6UW32 110 aa9.53□□□□□ -0.88
UBE3D-204ENST00000430071 RPS29P62273 56 aaKnown RBP9.52□□□□□ -0.88
UBE3D-204ENST00000430071 Q6JHZ5 121 aa9.52□□□□□ -0.88
UBE3D-204ENST00000430071 FAT4Q6V0I7 4981 aa9.52□□□□□ -0.89
UBE3D-204ENST00000430071 H3BQ85 93 aa9.51□□□□□ -0.89
UBE3D-204ENST00000430071 TMEM256-PLSCR3K7ERE1 68 aa9.51□□□□□ -0.89
UBE3D-204ENST00000430071 CD164Q04900 197 aa9.51□□□□□ -0.89
UBE3D-204ENST00000430071 TRBV20-1A0A075B6N2 111 aa9.5□□□□□ -0.89
UBE3D-204ENST00000430071 H3BMG7 143 aa9.5□□□□□ -0.89
UBE3D-204ENST00000430071 KRTAP13-3Q3SY46 172 aa9.5□□□□□ -0.89
UBE3D-204ENST00000430071 BAALC-AS2P0C853 105 aa9.49□□□□□ -0.89
UBE3D-204ENST00000430071 FP248Q71RG6 208 aaPredicted RBP9.49□□□□□ -0.89
UBE3D-204ENST00000430071 UBE2V1Q13404 147 aa9.48□□□□□ -0.89
UBE3D-204ENST00000430071 A0A1B0GV72 72 aa9.47□□□□□ -0.89
UBE3D-204ENST00000430071 C9JAW5 83 aa9.44□□□□□ -0.9
UBE3D-204ENST00000430071 ANKRD29Q8N6D5 301 aa9.44□□□□□ -0.9
UBE3D-204ENST00000430071 LIMD2Q9BT23 127 aa9.44□□□□□ -0.9
UBE3D-204ENST00000430071 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
UBE3D-204ENST00000430071 Q5XG85 94 aa9.42□□□□□ -0.9
UBE3D-204ENST00000430071 SPCS1Q9Y6A9 102 aa9.42□□□□□ -0.9
UBE3D-204ENST00000430071 TRBV7-7A0A0K0K1E9 115 aa9.41□□□□□ -0.9
UBE3D-204ENST00000430071 KRTAP4-1Q9BYQ7 146 aa9.41□□□□□ -0.9
UBE3D-204ENST00000430071 A0A0U1RQV1 116 aa9.4□□□□□ -0.9
UBE3D-204ENST00000430071 A0A1W2PNM2 257 aa9.39□□□□□ -0.91
UBE3D-204ENST00000430071 Q6Q795 121 aa9.39□□□□□ -0.91
UBE3D-204ENST00000430071 MTURNQ8N3F0 131 aa9.39□□□□□ -0.91
UBE3D-204ENST00000430071 TEN1Q86WV5 123 aa9.38□□□□□ -0.91
UBE3D-204ENST00000430071 TRBV7-4A0A0J9YYF1 115 aa9.37□□□□□ -0.91
UBE3D-204ENST00000430071 RBM3P98179 157 aaKnown RBP9.37□□□□□ -0.91
UBE3D-204ENST00000430071 ASB16-AS1Q495Z4 193 aa9.36□□□□□ -0.91
UBE3D-204ENST00000430071 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
UBE3D-204ENST00000430071 H3BT86 120 aa9.35□□□□□ -0.91
UBE3D-204ENST00000430071 K7EP34 96 aa9.35□□□□□ -0.91
UBE3D-204ENST00000430071 DSCR8Q96T75 97 aa9.33□□□□□ -0.92
UBE3D-204ENST00000430071 A0A087WSZ3 146 aa9.32□□□□□ -0.92
UBE3D-204ENST00000430071 JMJD7-PLA2G4BH0Y9G9 81 aa9.32□□□□□ -0.92
UBE3D-204ENST00000430071 CCKP06307 115 aa9.32□□□□□ -0.92
UBE3D-204ENST00000430071 OBSCN-AS1Q96MR7 158 aa9.32□□□□□ -0.92
UBE3D-204ENST00000430071 XP32Q5T750 250 aa9.31□□□□□ -0.92
UBE3D-204ENST00000430071 SMCPP49901 116 aaPredicted RBP9.3□□□□□ -0.92
UBE3D-204ENST00000430071 PRO0461Q9UI25 63 aa9.29□□□□□ -0.92
UBE3D-204ENST00000430071 VPS25Q9BRG1 176 aa9.28□□□□□ -0.92
UBE3D-204ENST00000430071 C14orf132Q9NPU4 83 aa9.28□□□□□ -0.92
UBE3D-204ENST00000430071 SS18L2Q9UHA2 77 aa9.28□□□□□ -0.92
UBE3D-204ENST00000430071 LOC110117498A0A087WWA1 95 aa9.27□□□□□ -0.93
UBE3D-204ENST00000430071 Q6ZQT0 140 aa9.27□□□□□ -0.93
UBE3D-204ENST00000430071 SEC61BP60468 96 aaKnown RBP9.25□□□□□ -0.93
UBE3D-204ENST00000430071 GTF2H5Q6ZYL4 71 aa9.25□□□□□ -0.93
UBE3D-204ENST00000430071 C9orf92A6NGG3 77 aa9.24□□□□□ -0.93
UBE3D-204ENST00000430071 KRTAP9-2Q9BYQ4 174 aa9.24□□□□□ -0.93
UBE3D-204ENST00000430071 Q96NJ1 140 aa9.24□□□□□ -0.93
UBE3D-204ENST00000430071 PDE6GP18545 87 aa9.23□□□□□ -0.93
UBE3D-204ENST00000430071 PCOTHQ58A44 107 aa9.16□□□□□ -0.94
UBE3D-204ENST00000430071 LINC00472Q9H8W2 130 aa9.16□□□□□ -0.94
UBE3D-204ENST00000430071 F8W1H4 67 aa9.15□□□□□ -0.94
UBE3D-204ENST00000430071 A0A1B0GW54 56 aa9.14□□□□□ -0.95
UBE3D-204ENST00000430071 C21orf62-AS1Q17RA5 79 aa9.14□□□□□ -0.95
UBE3D-204ENST00000430071 DEFB116Q30KQ4 102 aa9.14□□□□□ -0.95
UBE3D-204ENST00000430071 LCE2CQ5TA81 110 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms