RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 H3BS24 57 aa7.66□□□□□ -1.18
LDB3-205ENST00000429277 Q5VV11 94 aa7.66□□□□□ -1.18
LDB3-205ENST00000429277 Q5XG85 94 aa7.66□□□□□ -1.18
LDB3-205ENST00000429277 KRTAP1-5Q9BYS1 174 aa7.66□□□□□ -1.18
LDB3-205ENST00000429277 RPL37P61927 97 aaKnown RBP7.65□□□□□ -1.18
LDB3-205ENST00000429277 A0A0A0MQY5 61 aa7.64□□□□□ -1.19
LDB3-205ENST00000429277 KRTAP10-1P60331 282 aa7.61□□□□□ -1.19
LDB3-205ENST00000429277 Q6ZR54 194 aa7.61□□□□□ -1.19
LDB3-205ENST00000429277 PRRC2CQ9Y520 2896 aaKnown RBP7.61□□□□□ -1.19
LDB3-205ENST00000429277 OXTP01178 125 aa7.6□□□□□ -1.19
LDB3-205ENST00000429277 ROMO1P60602 79 aa7.59□□□□□ -1.19
LDB3-205ENST00000429277 ASB16-AS1Q495Z4 193 aa7.58□□□□□ -1.2
LDB3-205ENST00000429277 H1FX-AS1Q4G0G2 97 aa7.57□□□□□ -1.2
LDB3-205ENST00000429277 KRTAP4-16G5E9R7 235 aaPredicted RBP7.57□□□□□ -1.2
LDB3-205ENST00000429277 FLG2Q5D862 2391 aaPredicted RBP7.56□□□□□ -1.2
LDB3-205ENST00000429277 CYSTM1Q9H1C7 97 aa7.55□□□□□ -1.2
LDB3-205ENST00000429277 KRTAP10-2P60368 255 aa7.54□□□□□ -1.2
LDB3-205ENST00000429277 CFAP46Q8IYW2 2715 aa7.54□□□□□ -1.2
LDB3-205ENST00000429277 M0QZ58 72 aa7.54□□□□□ -1.2
LDB3-205ENST00000429277 PRAC1Q96KF2 57 aa7.53□□□□□ -1.2
LDB3-205ENST00000429277 RPS29P62273 56 aaKnown RBP7.53□□□□□ -1.2
LDB3-205ENST00000429277 KRTAP29-1A8MX34 341 aaPredicted RBP7.52□□□□□ -1.21
LDB3-205ENST00000429277 PLAC4Q8WY50 150 aa7.49□□□□□ -1.21
LDB3-205ENST00000429277 NBEAL1Q6ZS30 2694 aa7.45□□□□□ -1.22
LDB3-205ENST00000429277 PANO1I0J062 215 aa7.45□□□□□ -1.22
LDB3-205ENST00000429277 ADM2Q7Z4H4 148 aa7.43□□□□□ -1.22
LDB3-205ENST00000429277 A0A087X002 238 aa7.4□□□□□ -1.23
LDB3-205ENST00000429277 TEP1Q99973 2627 aaKnown RBP7.38□□□□□ -1.23
LDB3-205ENST00000429277 AKAP13Q12802 2813 aa7.37□□□□□ -1.23
LDB3-205ENST00000429277 SPATA8Q6RVD6 105 aa7.37□□□□□ -1.23
LDB3-205ENST00000429277 DMBT1Q9UGM3 2413 aaPredicted RBP7.36□□□□□ -1.23
LDB3-205ENST00000429277 TEX15Q9BXT5 2789 aa7.34□□□□□ -1.23
LDB3-205ENST00000429277 CHD6Q8TD26 2715 aa7.33□□□□□ -1.24
LDB3-205ENST00000429277 CENPEQ02224 2701 aa7.32□□□□□ -1.24
LDB3-205ENST00000429277 Q6ZRN7 208 aaPredicted RBP7.32□□□□□ -1.24
LDB3-205ENST00000429277 COL6A5A8TX70 2615 aa7.31□□□□□ -1.24
LDB3-205ENST00000429277 UNC79Q9P2D8 2635 aa7.3□□□□□ -1.24
LDB3-205ENST00000429277 NOTCH2NLQ7Z3S9 236 aa7.29□□□□□ -1.24
LDB3-205ENST00000429277 SETXQ7Z333 2677 aaKnown RBP7.28□□□□□ -1.24
LDB3-205ENST00000429277 A8MUU9 505 aa7.24□□□□□ -1.25
LDB3-205ENST00000429277 NOTCH1P46531 2555 aa7.24□□□□□ -1.25
LDB3-205ENST00000429277 KRTAP13-1Q8IUC0 172 aa7.24□□□□□ -1.25
LDB3-205ENST00000429277 GCN1Q92616 2671 aaKnown RBP7.22□□□□□ -1.25
LDB3-205ENST00000429277 KRTAP11-1Q8IUC1 163 aa7.21□□□□□ -1.26
LDB3-205ENST00000429277 KRTAP21-3Q3LHN1 58 aa7.2□□□□□ -1.26
LDB3-205ENST00000429277 KRTAP13-2Q52LG2 175 aa7.19□□□□□ -1.26
LDB3-205ENST00000429277 KRTAP25-1Q3LHN0 102 aa7.18□□□□□ -1.26
LDB3-205ENST00000429277 STAB2Q8WWQ8 2551 aa7.18□□□□□ -1.26
LDB3-205ENST00000429277 KRTAP7-1Q8IUC3 87 aa7.18□□□□□ -1.26
LDB3-205ENST00000429277 ZNF292O60281 2723 aa7.16□□□□□ -1.26
LDB3-205ENST00000429277 A6NN06 94 aa7.15□□□□□ -1.27
LDB3-205ENST00000429277 CEP350Q5VT06 3117 aa7.14□□□□□ -1.27
LDB3-205ENST00000429277 NSD1Q96L73 2696 aaPredicted RBP7.13□□□□□ -1.27
LDB3-205ENST00000429277 C20orf166-AS1Q96NR2 134 aa7.13□□□□□ -1.27
LDB3-205ENST00000429277 DNAH12Q6ZR08 3092 aa7.13□□□□□ -1.27
LDB3-205ENST00000429277 CHD7Q9P2D1 2997 aa7.1□□□□□ -1.27
LDB3-205ENST00000429277 KRTAP16-1A8MUX0 517 aa7.1□□□□□ -1.27
LDB3-205ENST00000429277 A8MU10 97 aa7.09□□□□□ -1.27
LDB3-205ENST00000429277 TNP1P09430 55 aa7.08□□□□□ -1.28
LDB3-205ENST00000429277 MAP1AP78559 2803 aaPredicted RBP7.08□□□□□ -1.28
LDB3-205ENST00000429277 GOLGB1Q14789 3259 aaKnown RBP7.07□□□□□ -1.28
LDB3-205ENST00000429277 BAHCC1Q9P281 2608 aa7.07□□□□□ -1.28
LDB3-205ENST00000429277 C5orf42Q9H799 3197 aa7.06□□□□□ -1.28
LDB3-205ENST00000429277 CHD9Q3L8U1 2897 aa7.03□□□□□ -1.28
LDB3-205ENST00000429277 KMT2BQ9UMN6 2715 aaPredicted RBP7.02□□□□□ -1.29
LDB3-205ENST00000429277 UBR5O95071 2799 aaPredicted RBP7.01□□□□□ -1.29
LDB3-205ENST00000429277 IGSF10Q6WRI0 2623 aa7.01□□□□□ -1.29
LDB3-205ENST00000429277 MGAQ8IWI9 3026 aa6.99□□□□□ -1.29
LDB3-205ENST00000429277 NBEAL2Q6ZNJ1 2754 aa6.99□□□□□ -1.29
LDB3-205ENST00000429277 ITPR2Q14571 2701 aa6.98□□□□□ -1.29
LDB3-205ENST00000429277 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
LDB3-205ENST00000429277 TRANK1O15050 2925 aa6.9□□□□□ -1.3
LDB3-205ENST00000429277 NDUFAF8A1L188 74 aa6.87□□□□□ -1.31
LDB3-205ENST00000429277 XP32Q5T750 250 aa6.85□□□□□ -1.31
LDB3-205ENST00000429277 KRTAP1-4P0C5Y4 121 aa6.84□□□□□ -1.31
LDB3-205ENST00000429277 C10orf95Q9H7T3 257 aa6.83□□□□□ -1.32
LDB3-205ENST00000429277 TPRXLQ17RH7 258 aa6.82□□□□□ -1.32
LDB3-205ENST00000429277 DSPP15924 2871 aaKnown RBP6.81□□□□□ -1.32
LDB3-205ENST00000429277 A0A0C4DFX4 3053 aa6.81□□□□□ -1.32
LDB3-205ENST00000429277 ITPR1Q14643 2758 aa6.81□□□□□ -1.32
LDB3-205ENST00000429277 CFAP54Q96N23 3096 aa6.8□□□□□ -1.32
LDB3-205ENST00000429277 KRTAP10-8P60410 259 aa6.77□□□□□ -1.33
LDB3-205ENST00000429277 UTRNP46939 3433 aa6.72□□□□□ -1.33
LDB3-205ENST00000429277 FRYQ5TBA9 3013 aa6.71□□□□□ -1.33
LDB3-205ENST00000429277 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
LDB3-205ENST00000429277 HTTP42858 3142 aa6.7□□□□□ -1.34
LDB3-205ENST00000429277 APCP25054 2843 aa6.68□□□□□ -1.34
LDB3-205ENST00000429277 HIVEP1P15822 2718 aa6.67□□□□□ -1.34
LDB3-205ENST00000429277 NIPBLQ6KC79 2804 aaeCLIP6.66□□□□□ -1.34
LDB3-205ENST00000429277 TENM4Q6N022 2769 aa6.66□□□□□ -1.34
LDB3-205ENST00000429277 P0C880 135 aa6.66□□□□□ -1.34
LDB3-205ENST00000429277 H0YAA0 97 aa6.65□□□□□ -1.34
LDB3-205ENST00000429277 RANBP2P49792 3224 aaKnown RBP6.65□□□□□ -1.34
LDB3-205ENST00000429277 WDFY4Q6ZS81 3184 aa6.65□□□□□ -1.34
LDB3-205ENST00000429277 UTP20O75691 2785 aaKnown RBP6.65□□□□□ -1.35
LDB3-205ENST00000429277 KRTAP13-3Q3SY46 172 aa6.63□□□□□ -1.35
LDB3-205ENST00000429277 PCNTO95613 3336 aa6.62□□□□□ -1.35
LDB3-205ENST00000429277 KRTAP10-10P60014 251 aa6.61□□□□□ -1.35
LDB3-205ENST00000429277 A0A1B0GVY2 172 aa6.61□□□□□ -1.35
LDB3-205ENST00000429277 FLNCQ14315 2725 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms