RNA–Protein interactions for RNA: ENST00000428128.1

RGPD1-203, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

TSL 1 (best)

Gene RGPD1, Length 3,479 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-203ENST00000428128 SPINT4Q6UDR6 99 aa1.76□□□□□ -2.13
RGPD1-203ENST00000428128 C2orf82Q6UX34 121 aa1.76□□□□□ -2.13
RGPD1-203ENST00000428128 R4GN34 69 aa1.76□□□□□ -2.13
RGPD1-203ENST00000428128 MINOS1-NBL1R4GNA1 71 aa1.76□□□□□ -2.13
RGPD1-203ENST00000428128 ARID1AO14497 2285 aa1.76□□□□□ -2.13
RGPD1-203ENST00000428128 SLPIP03973 132 aa1.76□□□□□ -2.13
RGPD1-203ENST00000428128 ELOF1P60002 83 aaKnown RBP1.76□□□□□ -2.13
RGPD1-203ENST00000428128 DMAC1Q96GE9 116 aa1.76□□□□□ -2.13
RGPD1-203ENST00000428128 KRTAP2-2Q9BYT5 123 aa1.76□□□□□ -2.13
RGPD1-203ENST00000428128 LINC01549A6NIU2 74 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 D6R8Y8 96 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 F8VRH5 84 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 LENEPQ9Y5L5 61 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 IGIPA6NJ69 53 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 FAM223BA6NKX1 122 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 KRTAP29-1A8MX34 341 aaPredicted RBP1.75□□□□□ -2.13
RGPD1-203ENST00000428128 LINC00315P59091 139 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 ZNF56Q15929 161 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 TPRXLQ17RH7 258 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 C10orf113Q5VZT2 155 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 HMCN2Q8NDA2 5059 aa1.75□□□□□ -2.13
RGPD1-203ENST00000428128 MED12Q93074 2177 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 TRAV12-3A0A0B4J271 114 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 SPINK4O60575 86 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 GAS8-AS1O95177 125 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 IGKV1-17P01599 117 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 MGST1P10620 155 aaKnown RBP1.74□□□□□ -2.13
RGPD1-203ENST00000428128 RPL39P5Q59GN2 51 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 TTTY12Q9BZ98 90 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 CNTRLQ7Z7A1 2325 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 TEX49A0A1B0GTD5 131 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 GAFA1Q96PS6 74 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 UBE2D4Q9Y2X8 147 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 TMSB15BA0A087X1C1 80 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 TRBV6-5A0A0K0K1A5 114 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 SPINK9Q5DT21 86 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 CSAG1Q6PB30 78 aa1.74□□□□□ -2.13
RGPD1-203ENST00000428128 ARHGAP32A7KAX9 2087 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 SEC16AO15027 2179 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 TNCP24821 2201 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 TRBV7-4A0A0J9YYF1 115 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 K7EIM0 57 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 NDUFA3O95167 84 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 HRES1P13985 223 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 DYNLRB1Q9NP97 96 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 KAAG1Q9UBP8 84 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 POLR2KP53803 58 aaKnown RBP1.73□□□□□ -2.13
RGPD1-203ENST00000428128 C4orf3Q8WVX3 66 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 HIGD2AQ9BW72 106 aa1.73□□□□□ -2.13
RGPD1-203ENST00000428128 MUC4Q99102 2169 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 TRBV6-8A0A0A6YYG3 113 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 K7EIL1 84 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 TRAV40A0A0B4J280 105 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 ATP5EP2Q5VTU8 51 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 Q6ZTI0 123 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 KRTAP11-1Q8IUC1 163 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 SPACA4Q8TDM5 124 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 SMIM2Q9BVW6 85 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 AKAP6Q13023 2319 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 LOC107984156A0A0G2JMH3 177 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 ERHP84090 104 aaKnown RBP1.72□□□□□ -2.13
RGPD1-203ENST00000428128 ARL17AQ8IVW1 177 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 LINC00846Q9NV44 126 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 INTS1Q8N201 2190 aaKnown RBP1.72□□□□□ -2.13
RGPD1-203ENST00000428128 NACAE9PAV3 2078 aa1.72□□□□□ -2.13
RGPD1-203ENST00000428128 MRPL33O75394 65 aaKnown RBP1.71□□□□□ -2.14
RGPD1-203ENST00000428128 PRB4P10163 310 aaPredicted RBP1.71□□□□□ -2.14
RGPD1-203ENST00000428128 S100A7L2Q5SY68 101 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 FAM74A4Q5TZK3 123 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 ROS1P08922 2347 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 A0A1W2PNN7 141 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 KRTAP1-4P0C5Y4 121 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 ATXN8Q156A1 80 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 LRP2P98164 4655 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 A8MTW9 85 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 F8WEM9 126 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 SPINK14Q6IE38 97 aa1.71□□□□□ -2.14
RGPD1-203ENST00000428128 ABCA1O95477 2261 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 A0A087WTM6 91 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 DMBT1Q9UGM3 2413 aaPredicted RBP1.7□□□□□ -2.14
RGPD1-203ENST00000428128 PDE6GP18545 87 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 KRTAP10-3P60369 221 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 PLGLAQ15195 96 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 LY6EQ16553 131 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 SPRR4Q96PI1 79 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 TFF1P04155 84 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 RNASE3P12724 160 aaKnown RBP1.7□□□□□ -2.14
RGPD1-203ENST00000428128 LCE1AQ5T7P2 110 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.7□□□□□ -2.14
RGPD1-203ENST00000428128 PPP1R17O96001 155 aa1.69□□□□□ -2.14
RGPD1-203ENST00000428128 CCL3L1P16619 93 aa1.69□□□□□ -2.14
RGPD1-203ENST00000428128 LINC01558Q9Y6Z2 57 aa1.69□□□□□ -2.14
RGPD1-203ENST00000428128 LRP1Q07954 4544 aaKnown RBP1.69□□□□□ -2.14
RGPD1-203ENST00000428128 CTSGP08311 255 aa1.68□□□□□ -2.14
RGPD1-203ENST00000428128 PRR9Q5T870 116 aa1.68□□□□□ -2.14
RGPD1-203ENST00000428128 RNF213Q63HN8 5207 aa1.68□□□□□ -2.14
RGPD1-203ENST00000428128 ZNF815PA8K554 130 aa1.68□□□□□ -2.14
RGPD1-203ENST00000428128 C10orf55Q5SWW7 151 aa1.68□□□□□ -2.14
RGPD1-203ENST00000428128 SPTSSBQ8NFR3 76 aa1.68□□□□□ -2.14
RGPD1-203ENST00000428128 IGKV2D-30A0A075B6S6 120 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 346.4 ms