RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 PLAC8Q9NZF1 115 aa6.24□□□□□ -1.41
CLTCL1-202ENST00000427926 ZNF292O60281 2723 aa6.23□□□□□ -1.41
CLTCL1-202ENST00000427926 STAB1Q9NY15 2570 aa6.22□□□□□ -1.41
CLTCL1-202ENST00000427926 A0A1W2PNM2 257 aa6.22□□□□□ -1.41
CLTCL1-202ENST00000427926 LINC00483Q53H64 154 aa6.22□□□□□ -1.41
CLTCL1-202ENST00000427926 DMAC1Q96GE9 116 aa6.21□□□□□ -1.42
CLTCL1-202ENST00000427926 KRTAP16-1A8MUX0 517 aa6.21□□□□□ -1.42
CLTCL1-202ENST00000427926 MGAQ8IWI9 3026 aa6.19□□□□□ -1.42
CLTCL1-202ENST00000427926 S4R3F8 94 aa6.19□□□□□ -1.42
CLTCL1-202ENST00000427926 OXTP01178 125 aa6.18□□□□□ -1.42
CLTCL1-202ENST00000427926 SETXQ7Z333 2677 aaKnown RBP6.18□□□□□ -1.42
CLTCL1-202ENST00000427926 SPTBN5Q9NRC6 3674 aaKnown RBP6.16□□□□□ -1.42
CLTCL1-202ENST00000427926 ZCCHC13Q8WW36 166 aaKnown RBP6.16□□□□□ -1.42
CLTCL1-202ENST00000427926 LUZP6Q538Z0 58 aa6.16□□□□□ -1.42
CLTCL1-202ENST00000427926 PRUNE2Q8WUY3 3088 aa6.15□□□□□ -1.42
CLTCL1-202ENST00000427926 LINC01558Q9Y6Z2 57 aa6.13□□□□□ -1.43
CLTCL1-202ENST00000427926 KRTAP10-1P60331 282 aa6.13□□□□□ -1.43
CLTCL1-202ENST00000427926 R4GN34 69 aa6.13□□□□□ -1.43
CLTCL1-202ENST00000427926 Q5VV11 94 aa6.13□□□□□ -1.43
CLTCL1-202ENST00000427926 CFAP54Q96N23 3096 aa6.13□□□□□ -1.43
CLTCL1-202ENST00000427926 CR1P17927 2039 aa6.12□□□□□ -1.43
CLTCL1-202ENST00000427926 REV3LO60673 3130 aa6.12□□□□□ -1.43
CLTCL1-202ENST00000427926 WDFY4Q6ZS81 3184 aa6.11□□□□□ -1.43
CLTCL1-202ENST00000427926 LAMA2P24043 3122 aaKnown RBP6.11□□□□□ -1.43
CLTCL1-202ENST00000427926 CDH23Q9H251 3354 aa6.11□□□□□ -1.43
CLTCL1-202ENST00000427926 AKAP13Q12802 2813 aa6.1□□□□□ -1.43
CLTCL1-202ENST00000427926 PRAC1Q96KF2 57 aa6.1□□□□□ -1.43
CLTCL1-202ENST00000427926 KRTAP10-2P60368 255 aa6.1□□□□□ -1.43
CLTCL1-202ENST00000427926 A0A1B0GU33 70 aa6.1□□□□□ -1.43
CLTCL1-202ENST00000427926 UNC80Q8N2C7 3258 aa6.09□□□□□ -1.43
CLTCL1-202ENST00000427926 Q8N9P0 234 aaPredicted RBP6.09□□□□□ -1.43
CLTCL1-202ENST00000427926 TEP1Q99973 2627 aaKnown RBP6.09□□□□□ -1.44
CLTCL1-202ENST00000427926 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
CLTCL1-202ENST00000427926 XIRP2A4UGR9 3374 aa6.08□□□□□ -1.44
CLTCL1-202ENST00000427926 SPINK7P58062 85 aa6.08□□□□□ -1.44
CLTCL1-202ENST00000427926 KRTAP21-3Q3LHN1 58 aa6.08□□□□□ -1.44
CLTCL1-202ENST00000427926 OCR1Q9BZK8 76 aa6.07□□□□□ -1.44
CLTCL1-202ENST00000427926 A0A0C4DFX4 3053 aa6.07□□□□□ -1.44
CLTCL1-202ENST00000427926 DSPP15924 2871 aaKnown RBP6.07□□□□□ -1.44
CLTCL1-202ENST00000427926 KRTAP1-5Q9BYS1 174 aa6.05□□□□□ -1.44
CLTCL1-202ENST00000427926 CYSTM1Q9H1C7 97 aa6.05□□□□□ -1.44
CLTCL1-202ENST00000427926 EYSQ5T1H1 3165 aa6.04□□□□□ -1.44
CLTCL1-202ENST00000427926 A0A087X002 238 aa6.03□□□□□ -1.44
CLTCL1-202ENST00000427926 SZT2Q5T011 3432 aa6.03□□□□□ -1.44
CLTCL1-202ENST00000427926 TEX15Q9BXT5 2789 aa6.03□□□□□ -1.44
CLTCL1-202ENST00000427926 IGSF10Q6WRI0 2623 aa6.02□□□□□ -1.45
CLTCL1-202ENST00000427926 A6NN06 94 aa6.02□□□□□ -1.45
CLTCL1-202ENST00000427926 CHD6Q8TD26 2715 aa6.01□□□□□ -1.45
CLTCL1-202ENST00000427926 BAHCC1Q9P281 2608 aa6□□□□□ -1.45
CLTCL1-202ENST00000427926 UNC79Q9P2D8 2635 aa6□□□□□ -1.45
CLTCL1-202ENST00000427926 TRIOO75962 3097 aa5.99□□□□□ -1.45
CLTCL1-202ENST00000427926 FLG2Q5D862 2391 aaPredicted RBP5.99□□□□□ -1.45
CLTCL1-202ENST00000427926 USP34Q70CQ2 3546 aa5.99□□□□□ -1.45
CLTCL1-202ENST00000427926 M0QZ58 72 aa5.98□□□□□ -1.45
CLTCL1-202ENST00000427926 MMP24-AS1A0A0U1RRL7 71 aa5.98□□□□□ -1.45
CLTCL1-202ENST00000427926 COL6A5A8TX70 2615 aa5.98□□□□□ -1.45
CLTCL1-202ENST00000427926 SPRR1AP35321 89 aa5.97□□□□□ -1.45
CLTCL1-202ENST00000427926 Q5W150 140 aa5.96□□□□□ -1.45
CLTCL1-202ENST00000427926 MAP1AP78559 2803 aaPredicted RBP5.96□□□□□ -1.46
CLTCL1-202ENST00000427926 SPRR1BP22528 89 aa5.95□□□□□ -1.46
CLTCL1-202ENST00000427926 VPS13AQ96RL7 3174 aa5.95□□□□□ -1.46
CLTCL1-202ENST00000427926 Q8NDZ9 215 aa5.94□□□□□ -1.46
CLTCL1-202ENST00000427926 Q6ZR54 194 aa5.94□□□□□ -1.46
CLTCL1-202ENST00000427926 GCN1Q92616 2671 aaKnown RBP5.92□□□□□ -1.46
CLTCL1-202ENST00000427926 NOTCH1P46531 2555 aa5.91□□□□□ -1.46
CLTCL1-202ENST00000427926 LINC00472Q9H8W2 130 aa5.88□□□□□ -1.47
CLTCL1-202ENST00000427926 FRYQ5TBA9 3013 aa5.86□□□□□ -1.47
CLTCL1-202ENST00000427926 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
CLTCL1-202ENST00000427926 NBEAL1Q6ZS30 2694 aa5.85□□□□□ -1.47
CLTCL1-202ENST00000427926 KRTAP26-1Q6PEX3 210 aa5.85□□□□□ -1.47
CLTCL1-202ENST00000427926 UBR5O95071 2799 aaPredicted RBP5.85□□□□□ -1.47
CLTCL1-202ENST00000427926 DMDP11532 3685 aa5.83□□□□□ -1.48
CLTCL1-202ENST00000427926 PANO1I0J062 215 aa5.83□□□□□ -1.48
CLTCL1-202ENST00000427926 COL6A3P12111 3177 aa5.83□□□□□ -1.48
CLTCL1-202ENST00000427926 RPL37P61927 97 aaKnown RBP5.82□□□□□ -1.48
CLTCL1-202ENST00000427926 CELSR3Q9NYQ7 3312 aa5.81□□□□□ -1.48
CLTCL1-202ENST00000427926 KRTAP25-1Q3LHN0 102 aa5.81□□□□□ -1.48
CLTCL1-202ENST00000427926 H1FX-AS1Q4G0G2 97 aa5.81□□□□□ -1.48
CLTCL1-202ENST00000427926 LAMA1P25391 3075 aa5.81□□□□□ -1.48
CLTCL1-202ENST00000427926 FLNCQ14315 2725 aa5.81□□□□□ -1.48
CLTCL1-202ENST00000427926 DMBT1Q9UGM3 2413 aaPredicted RBP5.81□□□□□ -1.48
CLTCL1-202ENST00000427926 DNAH14Q0VDD8 3507 aa5.81□□□□□ -1.48
CLTCL1-202ENST00000427926 NBEAL2Q6ZNJ1 2754 aa5.8□□□□□ -1.48
CLTCL1-202ENST00000427926 VCANP13611 3396 aa5.79□□□□□ -1.48
CLTCL1-202ENST00000427926 C20orf166-AS1Q96NR2 134 aa5.78□□□□□ -1.48
CLTCL1-202ENST00000427926 ATMQ13315 3056 aa5.78□□□□□ -1.48
CLTCL1-202ENST00000427926 ROMO1P60602 79 aa5.78□□□□□ -1.48
CLTCL1-202ENST00000427926 MYO15AQ9UKN7 3530 aa5.77□□□□□ -1.49
CLTCL1-202ENST00000427926 FRYLO94915 3013 aa5.77□□□□□ -1.49
CLTCL1-202ENST00000427926 ITPR1Q14643 2758 aa5.77□□□□□ -1.49
CLTCL1-202ENST00000427926 SPATA8Q6RVD6 105 aa5.77□□□□□ -1.49
CLTCL1-202ENST00000427926 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
CLTCL1-202ENST00000427926 ITPR2Q14571 2701 aa5.76□□□□□ -1.49
CLTCL1-202ENST00000427926 MUC3AQ02505 3323 aa5.76□□□□□ -1.49
CLTCL1-202ENST00000427926 RPS29P62273 56 aaKnown RBP5.75□□□□□ -1.49
CLTCL1-202ENST00000427926 STAB2Q8WWQ8 2551 aa5.74□□□□□ -1.49
CLTCL1-202ENST00000427926 COL12A1Q99715 3063 aa5.74□□□□□ -1.49
CLTCL1-202ENST00000427926 WDFY3Q8IZQ1 3526 aa5.73□□□□□ -1.49
CLTCL1-202ENST00000427926 BOD1L1Q8NFC6 3051 aa5.72□□□□□ -1.49
CLTCL1-202ENST00000427926 TACC2O95359 2948 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms